RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 TPRX1Q8N7U7 411 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 RFESDQ8TAC1 157 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 YPEL2Q96QA6 119 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 SDF2L1Q9HCN8 221 aa11.79□□□□□ -0.52
RAB40A-201ENST00000304236 C17orf112F2Z3M2 114 aa11.78□□□□□ -0.52
RAB40A-201ENST00000304236 CYB5R3P00387 301 aaPredicted RBP11.78□□□□□ -0.52
RAB40A-201ENST00000304236 TFF1P04155 84 aa11.78□□□□□ -0.52
RAB40A-201ENST00000304236 RPP30P78346 268 aaKnown RBP11.78□□□□□ -0.52
RAB40A-201ENST00000304236 RBPJQ06330 500 aa11.78□□□□□ -0.52
RAB40A-201ENST00000304236 AARDQ4LEZ3 155 aa11.78□□□□□ -0.52
RAB40A-201ENST00000304236 FAM53AQ6NSI3 398 aaPredicted RBP11.78□□□□□ -0.52
RAB40A-201ENST00000304236 ZNF709Q8N972 641 aa11.78□□□□□ -0.52
RAB40A-201ENST00000304236 R3HDM4Q96D70 268 aa11.78□□□□□ -0.52
RAB40A-201ENST00000304236 ACTR3CQ9C0K3 210 aaPredicted RBP11.78□□□□□ -0.52
RAB40A-201ENST00000304236 CTDSP1Q9GZU7 261 aa11.78□□□□□ -0.52
RAB40A-201ENST00000304236 CHD3Q12873 2000 aaKnown RBP11.78□□□□□ -0.52
RAB40A-201ENST00000304236 MARCH11A6NNE9 402 aa11.78□□□□□ -0.52
RAB40A-201ENST00000304236 RBFOX2O43251 390 aaKnown RBP eCLIP11.78□□□□□ -0.52
RAB40A-201ENST00000304236 EGR1P18146 543 aa11.78□□□□□ -0.52
RAB40A-201ENST00000304236 DUTP33316 252 aaKnown RBP11.78□□□□□ -0.52
RAB40A-201ENST00000304236 GLRXP35754 106 aa11.78□□□□□ -0.52
RAB40A-201ENST00000304236 KIR2DS2P43631 304 aa11.78□□□□□ -0.52
RAB40A-201ENST00000304236 EDDM3AQ14507 147 aa11.78□□□□□ -0.52
RAB40A-201ENST00000304236 MORN2Q502X0 79 aa11.78□□□□□ -0.52
RAB40A-201ENST00000304236 SEM1Q6ZVN7 128 aa11.78□□□□□ -0.52
RAB40A-201ENST00000304236 ZGRF1Q86YA3 2104 aa11.78□□□□□ -0.52
RAB40A-201ENST00000304236 RPP25LQ8N5L8 163 aaKnown RBP11.78□□□□□ -0.52
RAB40A-201ENST00000304236 OR13D1Q8NGV5 346 aa11.78□□□□□ -0.52
RAB40A-201ENST00000304236 Q8WTZ3 238 aa11.78□□□□□ -0.52
RAB40A-201ENST00000304236 GNG12Q9UBI6 72 aa11.78□□□□□ -0.52
RAB40A-201ENST00000304236 SVILO95425 2214 aa11.78□□□□□ -0.52
RAB40A-201ENST00000304236 IGKV1D-17A0A075B6S4 117 aa11.77□□□□□ -0.53
RAB40A-201ENST00000304236 TRGV8A0A0C4DH27 118 aa11.77□□□□□ -0.53
RAB40A-201ENST00000304236 DEFB108AA8MXU0 73 aa11.77□□□□□ -0.53
RAB40A-201ENST00000304236 CLDN34H7C241 214 aa11.77□□□□□ -0.53
RAB40A-201ENST00000304236 F2RL2O00254 374 aa11.77□□□□□ -0.53
RAB40A-201ENST00000304236 ITGB1BP1O14713 200 aa11.77□□□□□ -0.53
RAB40A-201ENST00000304236 CD55P08174 381 aa11.77□□□□□ -0.53
RAB40A-201ENST00000304236 NQO2P16083 231 aa11.77□□□□□ -0.53
RAB40A-201ENST00000304236 PSMB3P49720 205 aa11.77□□□□□ -0.53
RAB40A-201ENST00000304236 RND2P52198 227 aa11.77□□□□□ -0.53
RAB40A-201ENST00000304236 HOXA4Q00056 320 aaPredicted RBP11.77□□□□□ -0.53
RAB40A-201ENST00000304236 KIAA0141Q14154 515 aaPredicted RBP11.77□□□□□ -0.53
RAB40A-201ENST00000304236 ZNF674Q2M3X9 581 aa11.77□□□□□ -0.53
RAB40A-201ENST00000304236 ACSM6Q6P461 480 aa11.77□□□□□ -0.53
RAB40A-201ENST00000304236 OR10G9Q8NGN4 311 aa11.77□□□□□ -0.53
RAB40A-201ENST00000304236 OR10G7Q8NGN6 311 aa11.77□□□□□ -0.53
RAB40A-201ENST00000304236 OR52E5Q8NH55 327 aa11.77□□□□□ -0.53
RAB40A-201ENST00000304236 MANBALQ9NQG1 85 aa11.77□□□□□ -0.53
RAB40A-201ENST00000304236 DUSP13Q9UII6 198 aa11.77□□□□□ -0.53
RAB40A-201ENST00000304236 GAB2Q9UQC2 676 aa11.77□□□□□ -0.53
RAB40A-201ENST00000304236 DIDO1Q9BTC0 2240 aaKnown RBP11.76□□□□□ -0.53
RAB40A-201ENST00000304236 TMEM250H0YL14 139 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 CYB5BO43169 146 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 CRYAAP02489 173 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 ZNF83P51522 516 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 CASP6P55212 293 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 KLF3P57682 345 aaPredicted RBP11.76□□□□□ -0.53
RAB40A-201ENST00000304236 FFAR4Q5NUL3 377 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 NCR3LG1Q68D85 454 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 MEGF10Q96KG7 1140 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 DCTN5Q9BTE1 182 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 OR6C3Q9NZP0 311 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 NAT8Q9UHE5 227 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 TEX15Q9BXT5 2789 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 M0R1B8 84 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 IGKV1D-33P01593 117 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 IGKV1-33P01594 117 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 MDKP21741 143 aaPredicted RBP11.76□□□□□ -0.53
RAB40A-201ENST00000304236 SPCS3P61009 180 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 MEF2BQ02080 365 aaPredicted RBP11.76□□□□□ -0.53
RAB40A-201ENST00000304236 C1orf87Q8N0U7 546 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 GCSAMQ8N6F7 178 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 ZDHHC16Q969W1 377 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 S100PBPQ96BU1 408 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 ZNF251Q9BRH9 671 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 NPCDR1Q9BY65 106 aa11.76□□□□□ -0.53
RAB40A-201ENST00000304236 CCL21O00585 134 aa11.75□□□□□ -0.53
RAB40A-201ENST00000304236 FCGR3BO75015 233 aa11.75□□□□□ -0.53
RAB40A-201ENST00000304236 LHBP01229 141 aa11.75□□□□□ -0.53
RAB40A-201ENST00000304236 CXCL1P09341 107 aa11.75□□□□□ -0.53
RAB40A-201ENST00000304236 CA7P43166 264 aa11.75□□□□□ -0.53
RAB40A-201ENST00000304236 RAB7AP51149 207 aa11.75□□□□□ -0.53
RAB40A-201ENST00000304236 ERVFRD-1P60508 538 aa11.75□□□□□ -0.53
RAB40A-201ENST00000304236 ERVK-16P61578 105 aa11.75□□□□□ -0.53
RAB40A-201ENST00000304236 ACOT6Q3I5F7 207 aaPredicted RBP11.75□□□□□ -0.53
RAB40A-201ENST00000304236 C1orf185Q5T7R7 199 aa11.75□□□□□ -0.53
RAB40A-201ENST00000304236 WDR25Q64LD2 544 aaPredicted RBP11.75□□□□□ -0.53
RAB40A-201ENST00000304236 ZNF343Q6P1L6 599 aa11.75□□□□□ -0.53
RAB40A-201ENST00000304236 LRP11Q86VZ4 500 aa11.75□□□□□ -0.53
RAB40A-201ENST00000304236 OR4A16Q8NH70 328 aa11.75□□□□□ -0.53
RAB40A-201ENST00000304236 OR2V2Q96R30 315 aa11.75□□□□□ -0.53
RAB40A-201ENST00000304236 GGACTQ9BVM4 153 aa11.75□□□□□ -0.53
RAB40A-201ENST00000304236 TMPRSS5Q9H3S3 457 aa11.75□□□□□ -0.53
RAB40A-201ENST00000304236 OPN1MWP04001 364 aa11.74□□□□□ -0.53
RAB40A-201ENST00000304236 OPN1MW2P0DN77 364 aa11.74□□□□□ -0.53
RAB40A-201ENST00000304236 OPN1MW3P0DN78 364 aa11.74□□□□□ -0.53
RAB40A-201ENST00000304236 HOXA5P20719 270 aa11.74□□□□□ -0.53
RAB40A-201ENST00000304236 TIMP3P35625 211 aa11.74□□□□□ -0.53
RAB40A-201ENST00000304236 GATA4P43694 442 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms