RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 HSPB7Q9UBY9 170 aa11.08□□□□□ -0.64
ABR-202ENST00000302538 VAX2Q9UIW0 290 aa11.08□□□□□ -0.64
ABR-202ENST00000302538 TM4SF5O14894 197 aa11.08□□□□□ -0.64
ABR-202ENST00000302538 NEURL2Q9BR09 285 aa11.08□□□□□ -0.64
ABR-202ENST00000302538 S4R3C0 116 aa11.08□□□□□ -0.64
ABR-202ENST00000302538 IGHV3-48P01763 117 aa11.08□□□□□ -0.64
ABR-202ENST00000302538 MRPS18AQ9NVS2 196 aaKnown RBP11.08□□□□□ -0.64
ABR-202ENST00000302538 IGHV3-66A0A0C4DH42 116 aa11.08□□□□□ -0.64
ABR-202ENST00000302538 KLF7O75840 302 aaPredicted RBP11.08□□□□□ -0.64
ABR-202ENST00000302538 CD1AP06126 327 aa11.08□□□□□ -0.64
ABR-202ENST00000302538 RPL39P5Q59GN2 51 aa11.08□□□□□ -0.64
ABR-202ENST00000302538 CYB5R2Q6BCY4 276 aa11.08□□□□□ -0.64
ABR-202ENST00000302538 NXF2Q9GZY0 626 aaKnown RBP11.08□□□□□ -0.64
ABR-202ENST00000302538 MOB4Q9Y3A3 225 aa11.08□□□□□ -0.64
ABR-202ENST00000302538 ARID1AO14497 2285 aa11.07□□□□□ -0.64
ABR-202ENST00000302538 PGPA6NDG6 321 aa11.07□□□□□ -0.64
ABR-202ENST00000302538 IL4P05112 153 aa11.07□□□□□ -0.64
ABR-202ENST00000302538 CX3CL1P78423 397 aa11.07□□□□□ -0.64
ABR-202ENST00000302538 LHFPL5Q8TAF8 219 aa11.07□□□□□ -0.64
ABR-202ENST00000302538 SLC25A28Q96A46 364 aa11.07□□□□□ -0.64
ABR-202ENST00000302538 IL36RNQ9UBH0 155 aa11.07□□□□□ -0.64
ABR-202ENST00000302538 TRAV40A0A0B4J280 105 aa11.07□□□□□ -0.64
ABR-202ENST00000302538 TRBV5-5A0A0J9YX44 114 aa11.07□□□□□ -0.64
ABR-202ENST00000302538 NPIPB13A6NJU9 1138 aa11.07□□□□□ -0.64
ABR-202ENST00000302538 NPIPB4C9JG80 1138 aa11.07□□□□□ -0.64
ABR-202ENST00000302538 MOSP00540 346 aa11.07□□□□□ -0.64
ABR-202ENST00000302538 TMEM222Q9H0R3 208 aa11.07□□□□□ -0.64
ABR-202ENST00000302538 H0YL77 283 aa11.07□□□□□ -0.64
ABR-202ENST00000302538 PRB3Q04118 309 aaPredicted RBP11.07□□□□□ -0.64
ABR-202ENST00000302538 UQCC3Q6UW78 93 aa11.07□□□□□ -0.64
ABR-202ENST00000302538 GPHA2Q96T91 129 aa11.07□□□□□ -0.64
ABR-202ENST00000302538 SP5Q6BEB4 398 aaPredicted RBP11.07□□□□□ -0.64
ABR-202ENST00000302538 ARPC1AQ92747 370 aa11.07□□□□□ -0.64
ABR-202ENST00000302538 COL25A1Q9BXS0 654 aaPredicted RBP11.07□□□□□ -0.64
ABR-202ENST00000302538 G6PC2Q9NQR9 355 aa11.07□□□□□ -0.64
ABR-202ENST00000302538 M0QZK8 103 aa11.06□□□□□ -0.64
ABR-202ENST00000302538 MEF2CQ06413 473 aaPredicted RBP11.06□□□□□ -0.64
ABR-202ENST00000302538 MOGAT2Q3SYC2 334 aa11.06□□□□□ -0.64
ABR-202ENST00000302538 SIGIRRQ6IA17 410 aa11.06□□□□□ -0.64
ABR-202ENST00000302538 LOC390937A0A1W2PQ73 354 aa11.06□□□□□ -0.64
ABR-202ENST00000302538 M0R2Z0 102 aa11.06□□□□□ -0.64
ABR-202ENST00000302538 EFNA4P52798 201 aa11.06□□□□□ -0.64
ABR-202ENST00000302538 HIST3H3Q16695 136 aa11.06□□□□□ -0.64
ABR-202ENST00000302538 FAM74A4Q5TZK3 123 aa11.06□□□□□ -0.64
ABR-202ENST00000302538 TEX261Q6UWH6 196 aa11.06□□□□□ -0.64
ABR-202ENST00000302538 ST6GALNAC3Q8NDV1 305 aa11.06□□□□□ -0.64
ABR-202ENST00000302538 VAX1Q5SQQ9 334 aa11.06□□□□□ -0.64
ABR-202ENST00000302538 C3orf56Q8N813 242 aa11.06□□□□□ -0.64
ABR-202ENST00000302538 HSF4Q9ULV5 492 aa11.06□□□□□ -0.64
ABR-202ENST00000302538 TCF19Q9Y242 345 aa11.06□□□□□ -0.64
ABR-202ENST00000302538 ZFC3H1O60293 1989 aaKnown RBP11.06□□□□□ -0.64
ABR-202ENST00000302538 PINLYPA6NC86 204 aa11.06□□□□□ -0.64
ABR-202ENST00000302538 WDR25Q64LD2 544 aaPredicted RBP11.06□□□□□ -0.64
ABR-202ENST00000302538 MPDU1O75352 247 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 PGA5P0DJD9 388 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 HKR1P10072 659 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 TIMP3P35625 211 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 PSMB2P49721 201 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 FAM159AQ6UWV7 190 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 TOMM20LQ6UXN7 152 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 Q96M66 194 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 SPOCK3Q9BQ16 436 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 H3BTX0 84 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 ISLRO14498 428 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 DLX6P56179 175 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 CD69Q07108 199 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 MIC13Q5XKP0 118 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 NPIPB3Q92617 1050 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 AURKAIP1Q9NWT8 199 aaPredicted RBP11.05□□□□□ -0.64
ABR-202ENST00000302538 ZNF253O75346 499 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 CCKARP32238 428 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 GPR183P32249 361 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 CLEC19AQ6UXS0 136 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 POC1AQ8NBT0 407 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 WFIKKN1Q96NZ8 548 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 DNAJC4Q9NNZ3 241 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 ANAPC16Q96DE5 110 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 MARVELD1Q9BSK0 173 aa11.05□□□□□ -0.64
ABR-202ENST00000302538 SNURFLB1AK76 121 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 FOXF2Q12947 444 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 IRF3Q14653 427 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 ZNF56Q15929 161 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 GPR146Q96CH1 333 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 RSG1Q9BU20 258 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 VAMP8Q9BV40 100 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 TTC28Q96AY4 2481 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 KBTBD11-OT1A0A1B0GTJ5 212 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 C1QTNF9BB2RNN3 333 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 ZNF324O75467 553 aaPredicted RBP11.04□□□□□ -0.64
ABR-202ENST00000302538 C1QTNF9P0C862 333 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 SRSF6Q13247 344 aaKnown RBP11.04□□□□□ -0.64
ABR-202ENST00000302538 C1orf100Q5SVJ3 147 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 PHYHIPLQ96FC7 376 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 PITX3O75364 302 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 IL18BPO95998 194 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 ANOS1P23352 680 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 GALNT14Q96FL9 552 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 NIT2Q9NQR4 276 aa11.04□□□□□ -0.64
ABR-202ENST00000302538 GCM2O75603 506 aaPredicted RBP11.04□□□□□ -0.64
ABR-202ENST00000302538 ATP6V0CP27449 155 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms