RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 IGKV3-11P04433 115 aa12.15□□□□□ -0.47
CDT1-201ENST00000301019 MSR1P21757 451 aa12.15□□□□□ -0.47
CDT1-201ENST00000301019 TMEM196Q5HYL7 178 aa12.15□□□□□ -0.47
CDT1-201ENST00000301019 EBLN2Q6P2I7 272 aa12.15□□□□□ -0.47
CDT1-201ENST00000301019 TMEM116Q8NCL8 245 aa12.15□□□□□ -0.47
CDT1-201ENST00000301019 TSKUQ8WUA8 353 aa12.15□□□□□ -0.47
CDT1-201ENST00000301019 SGK494Q96LW2 274 aa12.15□□□□□ -0.47
CDT1-201ENST00000301019 OR8B2Q96RD0 313 aa12.15□□□□□ -0.47
CDT1-201ENST00000301019 NPCDR1Q9BY65 106 aa12.15□□□□□ -0.47
CDT1-201ENST00000301019 HILPDAQ9Y5L2 63 aa12.15□□□□□ -0.47
CDT1-201ENST00000301019 LRP5LA4QPB2 252 aa12.14□□□□□ -0.47
CDT1-201ENST00000301019 SYNGR4O95473 234 aa12.14□□□□□ -0.47
CDT1-201ENST00000301019 CA6P23280 308 aa12.14□□□□□ -0.47
CDT1-201ENST00000301019 FOXA3P55318 350 aaPredicted RBP12.14□□□□□ -0.47
CDT1-201ENST00000301019 RPL8P62917 257 aaKnown RBP12.14□□□□□ -0.47
CDT1-201ENST00000301019 RPL24P83731 157 aaKnown RBP12.14□□□□□ -0.47
CDT1-201ENST00000301019 KCNS1Q96KK3 526 aa12.14□□□□□ -0.47
CDT1-201ENST00000301019 RRHO14718 337 aa12.14□□□□□ -0.47
CDT1-201ENST00000301019 ARL4DP49703 201 aa12.14□□□□□ -0.47
CDT1-201ENST00000301019 FOXL1Q12952 345 aa12.14□□□□□ -0.47
CDT1-201ENST00000301019 LTC4SQ16873 150 aa12.14□□□□□ -0.47
CDT1-201ENST00000301019 RAET1LQ5VY80 246 aa12.14□□□□□ -0.47
CDT1-201ENST00000301019 ZNF324BQ6AW86 544 aaPredicted RBP12.14□□□□□ -0.47
CDT1-201ENST00000301019 SLC25A47Q6Q0C1 308 aa12.14□□□□□ -0.47
CDT1-201ENST00000301019 ZIC4Q8N9L1 334 aa12.14□□□□□ -0.47
CDT1-201ENST00000301019 OR4F17Q8NGA8 305 aa12.14□□□□□ -0.47
CDT1-201ENST00000301019 OR10G3Q8NGC4 313 aa12.14□□□□□ -0.47
CDT1-201ENST00000301019 PSMG3Q9BT73 122 aaPredicted RBP12.14□□□□□ -0.47
CDT1-201ENST00000301019 PHF7Q9BWX1 381 aaPredicted RBP12.14□□□□□ -0.47
CDT1-201ENST00000301019 LSM4Q9Y4Z0 139 aaKnown RBP12.14□□□□□ -0.47
CDT1-201ENST00000301019 PRR14LQ5THK1 2151 aa12.13□□□□□ -0.47
CDT1-201ENST00000301019 IGHV1-69-2A0A0G2JMI3 117 aa12.13□□□□□ -0.47
CDT1-201ENST00000301019 FABP6P51161 128 aa12.13□□□□□ -0.47
CDT1-201ENST00000301019 SPATA31B1PQ5VZV4 182 aa12.13□□□□□ -0.47
CDT1-201ENST00000301019 SLC23A3Q6PIS1 610 aa12.13□□□□□ -0.47
CDT1-201ENST00000301019 OR10P1Q8NGE3 313 aa12.13□□□□□ -0.47
CDT1-201ENST00000301019 ALKBH4Q9NXW9 302 aa12.13□□□□□ -0.47
CDT1-201ENST00000301019 FOXH1O75593 365 aa12.13□□□□□ -0.47
CDT1-201ENST00000301019 S1PR2O95136 353 aa12.13□□□□□ -0.47
CDT1-201ENST00000301019 CCL1P22362 96 aa12.13□□□□□ -0.47
CDT1-201ENST00000301019 NPY1RP25929 384 aa12.13□□□□□ -0.47
CDT1-201ENST00000301019 YPEL3P61236 119 aaPredicted RBP12.13□□□□□ -0.47
CDT1-201ENST00000301019 IGLV3-21P80748 117 aaPredicted RBP12.13□□□□□ -0.47
CDT1-201ENST00000301019 MIC13Q5XKP0 118 aa12.13□□□□□ -0.47
CDT1-201ENST00000301019 SLC22A18ASQ8N1D0 253 aa12.13□□□□□ -0.47
CDT1-201ENST00000301019 OR1F12Q8NHA8 337 aa12.13□□□□□ -0.47
CDT1-201ENST00000301019 CDX2Q99626 313 aaPredicted RBP12.13□□□□□ -0.47
CDT1-201ENST00000301019 IGHV2-26A0A0B4J1V2 119 aa12.13□□□□□ -0.47
CDT1-201ENST00000301019 OR7C2O60412 319 aa12.13□□□□□ -0.47
CDT1-201ENST00000301019 MRPL52Q86TS9 123 aaKnown RBP12.13□□□□□ -0.47
CDT1-201ENST00000301019 FGFRL1Q8N441 504 aa12.13□□□□□ -0.47
CDT1-201ENST00000301019 ULBP2Q9BZM5 246 aa12.13□□□□□ -0.47
CDT1-201ENST00000301019 CORTO00230 105 aa12.12□□□□□ -0.47
CDT1-201ENST00000301019 DRD1P21728 446 aa12.12□□□□□ -0.47
CDT1-201ENST00000301019 RPEL1Q2QD12 228 aa12.12□□□□□ -0.47
CDT1-201ENST00000301019 TM4SF20Q53R12 229 aa12.12□□□□□ -0.47
CDT1-201ENST00000301019 PQLC2Q6ZP29 291 aa12.12□□□□□ -0.47
CDT1-201ENST00000301019 FAM166BA8MTA8 275 aa12.12□□□□□ -0.47
CDT1-201ENST00000301019 H0Y980 276 aa12.12□□□□□ -0.47
CDT1-201ENST00000301019 VENTXO95231 258 aa12.12□□□□□ -0.47
CDT1-201ENST00000301019 SSX8Q7RTT4 187 aa12.12□□□□□ -0.47
CDT1-201ENST00000301019 NANOS1Q8WY41 292 aaKnown RBP12.12□□□□□ -0.47
CDT1-201ENST00000301019 SPTSSAQ969W0 71 aa12.12□□□□□ -0.47
CDT1-201ENST00000301019 CHTOPQ9Y3Y2 248 aaKnown RBP12.12□□□□□ -0.47
CDT1-201ENST00000301019 YTHDF2Q9Y5A9 579 aaKnown RBP12.12□□□□□ -0.47
CDT1-201ENST00000301019 RP1L1Q8IWN7 2480 aaPredicted RBP12.12□□□□□ -0.47
CDT1-201ENST00000301019 GAGE10A6NGK3 116 aa12.11□□□□□ -0.47
CDT1-201ENST00000301019 M0R1X1 148 aa12.11□□□□□ -0.47
CDT1-201ENST00000301019 SLAQ13239 276 aa12.11□□□□□ -0.47
CDT1-201ENST00000301019 CNN3Q15417 329 aaKnown RBP12.11□□□□□ -0.47
CDT1-201ENST00000301019 OR1B1Q8NGR6 318 aa12.11□□□□□ -0.47
CDT1-201ENST00000301019 TPRP12270 2363 aaKnown RBP12.11□□□□□ -0.47
CDT1-201ENST00000301019 BMPR1BO00238 502 aa12.11□□□□□ -0.47
CDT1-201ENST00000301019 ZNF138P52744 262 aa12.11□□□□□ -0.47
CDT1-201ENST00000301019 FGFBP3Q8TAT2 258 aa12.11□□□□□ -0.47
CDT1-201ENST00000301019 CLDN23Q96B33 292 aa12.11□□□□□ -0.47
CDT1-201ENST00000301019 OR2D2Q9H210 308 aa12.11□□□□□ -0.47
CDT1-201ENST00000301019 IL36BQ9NZH7 164 aa12.11□□□□□ -0.47
CDT1-201ENST00000301019 NPIPA3F8WFD2 350 aa12.11□□□□□ -0.47
CDT1-201ENST00000301019 SYNGR1O43759 233 aa12.11□□□□□ -0.47
CDT1-201ENST00000301019 CTSSP25774 331 aa12.11□□□□□ -0.47
CDT1-201ENST00000301019 THYN1Q9P016 225 aa12.11□□□□□ -0.47
CDT1-201ENST00000301019 TFF1P04155 84 aa12.1□□□□□ -0.47
CDT1-201ENST00000301019 CTXN2P0C2S0 81 aa12.1□□□□□ -0.47
CDT1-201ENST00000301019 ZNF32P17041 273 aa12.1□□□□□ -0.47
CDT1-201ENST00000301019 C17orf67Q0P5P2 114 aa12.1□□□□□ -0.47
CDT1-201ENST00000301019 DAZAP2Q15038 168 aaPredicted RBP12.1□□□□□ -0.47
CDT1-201ENST00000301019 OR2M7Q8NG81 312 aa12.1□□□□□ -0.47
CDT1-201ENST00000301019 IL36GQ9NZH8 169 aa12.1□□□□□ -0.47
CDT1-201ENST00000301019 A0A1W2PQF6 199 aa12.1□□□□□ -0.47
CDT1-201ENST00000301019 TLX3O43711 291 aaPredicted RBP12.1□□□□□ -0.47
CDT1-201ENST00000301019 DNAJC13O75165 2243 aa12.1□□□□□ -0.47
CDT1-201ENST00000301019 CT55Q8WUE5 264 aa12.1□□□□□ -0.47
CDT1-201ENST00000301019 TRAV9-2A0A087WT02 112 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 OR4C46A6NHA9 309 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 TOX4O94842 621 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 TNFP01375 233 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 CRYBB3P26998 211 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 SMIM21Q3B7S5 101 aa12.09□□□□□ -0.47
CDT1-201ENST00000301019 TMEM211Q6ICI0 200 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms