RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 CCL13Q99616 98 aa11.3□□□□□ -0.6
CDH8-201ENST00000299345 FAM215AQ9Y5M1 114 aa11.3□□□□□ -0.6
CDH8-201ENST00000299345 YIF1AO95070 293 aa11.29□□□□□ -0.6
CDH8-201ENST00000299345 TRGC2P03986 189 aa11.29□□□□□ -0.6
CDH8-201ENST00000299345 OPN1MWP04001 364 aa11.29□□□□□ -0.6
CDH8-201ENST00000299345 OPN1MW2P0DN77 364 aa11.29□□□□□ -0.6
CDH8-201ENST00000299345 OPN1MW3P0DN78 364 aa11.29□□□□□ -0.6
CDH8-201ENST00000299345 C1QL4Q86Z23 238 aa11.29□□□□□ -0.6
CDH8-201ENST00000299345 TP53TG5Q9Y2B4 290 aa11.29□□□□□ -0.6
CDH8-201ENST00000299345 PPP1R2P9O14990 202 aa11.29□□□□□ -0.6
CDH8-201ENST00000299345 EIF4EBP1Q13541 118 aaPredicted RBP11.29□□□□□ -0.6
CDH8-201ENST00000299345 TMEM108Q6UXF1 575 aa11.29□□□□□ -0.6
CDH8-201ENST00000299345 ABHD12Q8N2K0 398 aa11.29□□□□□ -0.6
CDH8-201ENST00000299345 NEIL1Q96FI4 390 aaPredicted RBP11.29□□□□□ -0.6
CDH8-201ENST00000299345 CTDSP1Q9GZU7 261 aa11.29□□□□□ -0.6
CDH8-201ENST00000299345 CFHR2P36980 270 aa11.29□□□□□ -0.6
CDH8-201ENST00000299345 IGFL3Q6UXB1 125 aa11.29□□□□□ -0.6
CDH8-201ENST00000299345 ZNF251Q9BRH9 671 aa11.29□□□□□ -0.6
CDH8-201ENST00000299345 PATZ1Q9HBE1 687 aaKnown RBP11.29□□□□□ -0.6
CDH8-201ENST00000299345 DEFA4P12838 97 aa11.28□□□□□ -0.6
CDH8-201ENST00000299345 KRTCAP3Q53RY4 240 aa11.28□□□□□ -0.6
CDH8-201ENST00000299345 SPRNQ5BIV9 151 aa11.28□□□□□ -0.6
CDH8-201ENST00000299345 DOK5Q9P104 306 aa11.28□□□□□ -0.6
CDH8-201ENST00000299345 C15orf62A8K5M9 175 aa11.28□□□□□ -0.6
CDH8-201ENST00000299345 VSTM5A8MXK1 200 aa11.28□□□□□ -0.6
CDH8-201ENST00000299345 C11orf94C9JXX5 98 aa11.28□□□□□ -0.6
CDH8-201ENST00000299345 TMEM250H0YL14 139 aa11.28□□□□□ -0.6
CDH8-201ENST00000299345 KBTBD11O94819 623 aa11.28□□□□□ -0.6
CDH8-201ENST00000299345 GYPAP02724 150 aa11.28□□□□□ -0.6
CDH8-201ENST00000299345 TIMP3P35625 211 aa11.28□□□□□ -0.6
CDH8-201ENST00000299345 CCL8P80075 99 aa11.28□□□□□ -0.6
CDH8-201ENST00000299345 PDZD11Q5EBL8 140 aa11.28□□□□□ -0.6
CDH8-201ENST00000299345 GFOD1Q9NXC2 390 aa11.28□□□□□ -0.6
CDH8-201ENST00000299345 GAB2Q9UQC2 676 aa11.28□□□□□ -0.6
CDH8-201ENST00000299345 TCF19Q9Y242 345 aa11.28□□□□□ -0.6
CDH8-201ENST00000299345 TRAV38-1A0A0B4J264 116 aa11.27□□□□□ -0.6
CDH8-201ENST00000299345 RBFOX2O43251 390 aaKnown RBP eCLIP11.27□□□□□ -0.6
CDH8-201ENST00000299345 TGOLN2O43493 480 aa11.27□□□□□ -0.6
CDH8-201ENST00000299345 CLEC12BQ2HXU8 276 aa11.27□□□□□ -0.6
CDH8-201ENST00000299345 IGF2-ASQ6U949 168 aa11.27□□□□□ -0.6
CDH8-201ENST00000299345 PARLQ9H300 379 aa11.27□□□□□ -0.6
CDH8-201ENST00000299345 KBTBD11-OT1A0A1B0GTJ5 212 aa11.27□□□□□ -0.61
CDH8-201ENST00000299345 NKX6-3A6NJ46 265 aa11.27□□□□□ -0.61
CDH8-201ENST00000299345 HRASP01112 189 aa11.27□□□□□ -0.61
CDH8-201ENST00000299345 CD40P25942 277 aa11.27□□□□□ -0.61
CDH8-201ENST00000299345 THBS3P49746 956 aa11.27□□□□□ -0.61
CDH8-201ENST00000299345 CD81P60033 236 aa11.27□□□□□ -0.61
CDH8-201ENST00000299345 CYP2G1PQ6ZSU1 146 aa11.27□□□□□ -0.61
CDH8-201ENST00000299345 CENPVQ7Z7K6 275 aaPredicted RBP11.27□□□□□ -0.61
CDH8-201ENST00000299345 GATAD1Q8WUU5 269 aa11.27□□□□□ -0.61
CDH8-201ENST00000299345 ADTRPQ96IZ2 230 aa11.27□□□□□ -0.61
CDH8-201ENST00000299345 IFI27L2Q9H2X8 130 aa11.27□□□□□ -0.61
CDH8-201ENST00000299345 WDR83OSQ9Y284 106 aa11.27□□□□□ -0.61
CDH8-201ENST00000299345 F2RL2O00254 374 aa11.27□□□□□ -0.61
CDH8-201ENST00000299345 TMPRSS2O15393 492 aa11.27□□□□□ -0.61
CDH8-201ENST00000299345 SLC31A2O15432 143 aa11.27□□□□□ -0.61
CDH8-201ENST00000299345 TNFRSF1AP19438 455 aa11.27□□□□□ -0.61
CDH8-201ENST00000299345 ZNF134P52741 427 aa11.27□□□□□ -0.61
CDH8-201ENST00000299345 SP5Q6BEB4 398 aaPredicted RBP11.27□□□□□ -0.61
CDH8-201ENST00000299345 OR13D1Q8NGV5 346 aa11.27□□□□□ -0.61
CDH8-201ENST00000299345 KCNIP2Q9NS61 270 aa11.27□□□□□ -0.61
CDH8-201ENST00000299345 GAR1Q9NY12 217 aaKnown RBP11.27□□□□□ -0.61
CDH8-201ENST00000299345 IL19Q9UHD0 177 aa11.27□□□□□ -0.61
CDH8-201ENST00000299345 PCNX1Q96RV3 2341 aa11.27□□□□□ -0.61
CDH8-201ENST00000299345 MPDU1O75352 247 aa11.26□□□□□ -0.61
CDH8-201ENST00000299345 MAS1LP35410 378 aa11.26□□□□□ -0.61
CDH8-201ENST00000299345 S100A12P80511 92 aa11.26□□□□□ -0.61
CDH8-201ENST00000299345 GCM1Q9NP62 436 aa11.26□□□□□ -0.61
CDH8-201ENST00000299345 PMS2P5A8MQ11 134 aa11.26□□□□□ -0.61
CDH8-201ENST00000299345 PROP1O75360 226 aa11.26□□□□□ -0.61
CDH8-201ENST00000299345 IGHV1-46P01743 117 aa11.26□□□□□ -0.61
CDH8-201ENST00000299345 IGHV2-5P01817 119 aa11.26□□□□□ -0.61
CDH8-201ENST00000299345 WDR25Q64LD2 544 aaPredicted RBP11.26□□□□□ -0.61
CDH8-201ENST00000299345 FAM216BQ8N7L0 139 aa11.26□□□□□ -0.61
CDH8-201ENST00000299345 FAM57AQ8TBR7 257 aa11.26□□□□□ -0.61
CDH8-201ENST00000299345 SSMEM1Q8WWF3 244 aa11.26□□□□□ -0.61
CDH8-201ENST00000299345 SPTA1P02549 2419 aa11.26□□□□□ -0.61
CDH8-201ENST00000299345 TRAV3A0A0B4J244 114 aa11.26□□□□□ -0.61
CDH8-201ENST00000299345 hADV38S2A0JD32 116 aa11.26□□□□□ -0.61
CDH8-201ENST00000299345 FAM90A9PA6NNJ1 464 aa11.26□□□□□ -0.61
CDH8-201ENST00000299345 C16orf97H3BN30 126 aa11.26□□□□□ -0.61
CDH8-201ENST00000299345 RRHO14718 337 aa11.26□□□□□ -0.61
CDH8-201ENST00000299345 CLN5O75503 358 aa11.26□□□□□ -0.61
CDH8-201ENST00000299345 PAX5Q02548 391 aa11.26□□□□□ -0.61
CDH8-201ENST00000299345 C16orf82Q7Z2V1 217 aa11.26□□□□□ -0.61
CDH8-201ENST00000299345 SAA2-SAA4A0A096LPE2 208 aa11.25□□□□□ -0.61
CDH8-201ENST00000299345 A8MXE2 369 aa11.25□□□□□ -0.61
CDH8-201ENST00000299345 PPP5D1E7EU14 171 aa11.25□□□□□ -0.61
CDH8-201ENST00000299345 SAA2P0DJI9 122 aaPredicted RBP11.25□□□□□ -0.61
CDH8-201ENST00000299345 MDKP21741 143 aaPredicted RBP11.25□□□□□ -0.61
CDH8-201ENST00000299345 NPY1RP25929 384 aa11.25□□□□□ -0.61
CDH8-201ENST00000299345 PLA2G5P39877 138 aa11.25□□□□□ -0.61
CDH8-201ENST00000299345 LOXL3P58215 753 aa11.25□□□□□ -0.61
CDH8-201ENST00000299345 RTL8BQ17RB0 113 aa11.25□□□□□ -0.61
CDH8-201ENST00000299345 CT45A1Q5HYN5 189 aa11.25□□□□□ -0.61
CDH8-201ENST00000299345 GCSAMLQ5JQS6 135 aa11.25□□□□□ -0.61
CDH8-201ENST00000299345 CISD2Q8N5K1 135 aaKnown RBP11.25□□□□□ -0.61
CDH8-201ENST00000299345 CT45A3Q8NHU0 189 aa11.25□□□□□ -0.61
CDH8-201ENST00000299345 TMEM242Q9NWH2 141 aa11.25□□□□□ -0.61
CDH8-201ENST00000299345 A0A1W2PPQ1 181 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms