RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 SNAPC5O75971 98 aa16.92■□□□□ 0.3
SMCO4-201ENST00000298966 OPN1MWP04001 364 aa16.92■□□□□ 0.3
SMCO4-201ENST00000298966 OPN1MW2P0DN77 364 aa16.92■□□□□ 0.3
SMCO4-201ENST00000298966 OPN1MW3P0DN78 364 aa16.92■□□□□ 0.3
SMCO4-201ENST00000298966 THBS3P49746 956 aa16.92■□□□□ 0.3
SMCO4-201ENST00000298966 ZNF137PP52743 207 aa16.92■□□□□ 0.3
SMCO4-201ENST00000298966 FGL1Q08830 312 aa16.92■□□□□ 0.3
SMCO4-201ENST00000298966 ZNF695Q8IW36 515 aa16.92■□□□□ 0.3
SMCO4-201ENST00000298966 LYG1Q8N1E2 194 aa16.92■□□□□ 0.3
SMCO4-201ENST00000298966 RBPMSQ93062 196 aaKnown RBP16.92■□□□□ 0.3
SMCO4-201ENST00000298966 PDCD10Q9BUL8 212 aa16.92■□□□□ 0.3
SMCO4-201ENST00000298966 CLEC7AQ9BXN2 247 aa16.92■□□□□ 0.3
SMCO4-201ENST00000298966 NMES1Q9C002 83 aa16.92■□□□□ 0.3
SMCO4-201ENST00000298966 HEXA-AS1Q9H8Q6 139 aa16.92■□□□□ 0.3
SMCO4-201ENST00000298966 PRR13Q9NZ81 148 aa16.92■□□□□ 0.3
SMCO4-201ENST00000298966 ONECUT1Q9UBC0 465 aa16.92■□□□□ 0.3
SMCO4-201ENST00000298966 PRELID3BQ9Y3B1 194 aa16.92■□□□□ 0.3
SMCO4-201ENST00000298966 AMMECR1Q9Y4X0 333 aaPredicted RBP16.92■□□□□ 0.3
SMCO4-201ENST00000298966 C5orf51A6NDU8 294 aa16.91■□□□□ 0.3
SMCO4-201ENST00000298966 BTBD17A6NE02 478 aa16.91■□□□□ 0.3
SMCO4-201ENST00000298966 RBFOX2O43251 390 aaKnown RBP eCLIP16.91■□□□□ 0.31e-6■■□□□ 12.9
SMCO4-201ENST00000298966 TNFSF12O43508 249 aa16.91■□□□□ 0.3
SMCO4-201ENST00000298966 ADAP1O75689 374 aa16.91■□□□□ 0.3
SMCO4-201ENST00000298966 TSPAN9O75954 239 aa16.91■□□□□ 0.3
SMCO4-201ENST00000298966 GNG10P50151 68 aa16.91■□□□□ 0.3
SMCO4-201ENST00000298966 NKX2-5P52952 324 aaPredicted RBP16.91■□□□□ 0.3
SMCO4-201ENST00000298966 SP6Q3SY56 376 aa16.91■□□□□ 0.3
SMCO4-201ENST00000298966 ABHD12Q8N2K0 398 aa16.91■□□□□ 0.3
SMCO4-201ENST00000298966 DRAXINQ8NBI3 349 aaPredicted RBP16.91■□□□□ 0.3
SMCO4-201ENST00000298966 OR51H1Q8NH63 302 aa16.91■□□□□ 0.3
SMCO4-201ENST00000298966 SPIN2AQ99865 258 aa16.91■□□□□ 0.3
SMCO4-201ENST00000298966 SPIN2BQ9BPZ2 258 aa16.91■□□□□ 0.3
SMCO4-201ENST00000298966 SIRPDQ9H106 197 aa16.91■□□□□ 0.3
SMCO4-201ENST00000298966 FAM96BQ9Y3D0 163 aa16.91■□□□□ 0.3
SMCO4-201ENST00000298966 FAM25EA8MYX2 175 aa16.9■□□□□ 0.3
SMCO4-201ENST00000298966 SLC31A2O15432 143 aa16.9■□□□□ 0.3
SMCO4-201ENST00000298966 DUTP33316 252 aaKnown RBP16.9■□□□□ 0.3
SMCO4-201ENST00000298966 NCR3LG1Q68D85 454 aa16.9■□□□□ 0.3
SMCO4-201ENST00000298966 FAM53AQ6NSI3 398 aaPredicted RBP16.9■□□□□ 0.3
SMCO4-201ENST00000298966 ZNF833PQ6ZTB9 187 aa16.9■□□□□ 0.3
SMCO4-201ENST00000298966 OR10X1Q8NGY0 326 aa16.9■□□□□ 0.3
SMCO4-201ENST00000298966 WDR89Q96FK6 387 aaPredicted RBP16.9■□□□□ 0.3
SMCO4-201ENST00000298966 C2orf50Q96LR7 162 aa16.9■□□□□ 0.3
SMCO4-201ENST00000298966 RYR3Q15413 4870 aa16.89■□□□□ 0.29
SMCO4-201ENST00000298966 SAA2-SAA4A0A096LPE2 208 aa16.89■□□□□ 0.29
SMCO4-201ENST00000298966 IGHV2-26A0A0B4J1V2 119 aa16.89■□□□□ 0.29
SMCO4-201ENST00000298966 M0R1X1 148 aa16.89■□□□□ 0.29
SMCO4-201ENST00000298966 TXNL1O43396 289 aa16.89■□□□□ 0.29
SMCO4-201ENST00000298966 HOXB5P09067 269 aa16.89■□□□□ 0.29
SMCO4-201ENST00000298966 SAA2P0DJI9 122 aaPredicted RBP16.89■□□□□ 0.29
SMCO4-201ENST00000298966 VDAC1P21796 283 aa16.89■□□□□ 0.29
SMCO4-201ENST00000298966 GGNBP1Q5YKI7 109 aa16.89■□□□□ 0.29
SMCO4-201ENST00000298966 ODF3L1Q8IXM7 274 aa16.89■□□□□ 0.29
SMCO4-201ENST00000298966 OR11H4Q8NGC9 324 aa16.89■□□□□ 0.29
SMCO4-201ENST00000298966 TCTEX1D2Q8WW35 142 aa16.89■□□□□ 0.29
SMCO4-201ENST00000298966 ZFP57Q9NU63 452 aa16.89■□□□□ 0.29
SMCO4-201ENST00000298966 COMMD9Q9P000 198 aa16.89■□□□□ 0.29
SMCO4-201ENST00000298966 VPREB3Q9UKI3 123 aa16.89■□□□□ 0.29
SMCO4-201ENST00000298966 C13orf42A0A1B0GVH6 325 aa16.88■□□□□ 0.29
SMCO4-201ENST00000298966 RRASP10301 218 aa16.88■□□□□ 0.29
SMCO4-201ENST00000298966 ARF6P62330 175 aa16.88■□□□□ 0.29
SMCO4-201ENST00000298966 Q5BKY6 102 aa16.88■□□□□ 0.29
SMCO4-201ENST00000298966 TMEM268Q5VZI3 342 aa16.88■□□□□ 0.29
SMCO4-201ENST00000298966 PDZD9Q8IXQ8 264 aa16.88■□□□□ 0.29
SMCO4-201ENST00000298966 SELENOHQ8IZQ5 122 aaKnown RBP16.88■□□□□ 0.29
SMCO4-201ENST00000298966 OR11H6Q8NGC7 330 aa16.88■□□□□ 0.29
SMCO4-201ENST00000298966 LHFPL5Q8TAF8 219 aa16.88■□□□□ 0.29
SMCO4-201ENST00000298966 LEAP2Q969E1 77 aa16.88■□□□□ 0.29
SMCO4-201ENST00000298966 LSM10Q969L4 123 aaKnown RBP16.88■□□□□ 0.29
SMCO4-201ENST00000298966 C5orf30Q96GV9 206 aa16.88■□□□□ 0.29
SMCO4-201ENST00000298966 ZNF251Q9BRH9 671 aa16.88■□□□□ 0.29
SMCO4-201ENST00000298966 HMSDA8MTL9 139 aa16.87■□□□□ 0.29
SMCO4-201ENST00000298966 IGLV1-47P01700 117 aa16.87■□□□□ 0.29
SMCO4-201ENST00000298966 FBP1P09467 338 aa16.87■□□□□ 0.29
SMCO4-201ENST00000298966 SLC25A6P12236 298 aa16.87■□□□□ 0.29
SMCO4-201ENST00000298966 IL15RAQ13261 267 aa16.87■□□□□ 0.29
SMCO4-201ENST00000298966 HLA-DRB5Q30154 266 aa16.87■□□□□ 0.29
SMCO4-201ENST00000298966 FAM219AQ8IW50 185 aa16.87■□□□□ 0.29
SMCO4-201ENST00000298966 SPAG16Q8N0X2 631 aa16.87■□□□□ 0.29
SMCO4-201ENST00000298966 C9orf62Q8N4C0 152 aa16.87■□□□□ 0.29
SMCO4-201ENST00000298966 Q8N7P7 452 aa16.87■□□□□ 0.29
SMCO4-201ENST00000298966 SEC22AQ96IW7 307 aa16.87■□□□□ 0.29
SMCO4-201ENST00000298966 TRAV14DV4A0A0A6YYC5 116 aa16.86■□□□□ 0.29
SMCO4-201ENST00000298966 PROP1O75360 226 aa16.86■□□□□ 0.29
SMCO4-201ENST00000298966 SLC25A4P12235 298 aa16.86■□□□□ 0.29
SMCO4-201ENST00000298966 ARHGDIBP52566 201 aa16.86■□□□□ 0.29
SMCO4-201ENST00000298966 LYZL2Q7Z4W2 148 aa16.86■□□□□ 0.29
SMCO4-201ENST00000298966 PIP4P2Q8N4L2 257 aa16.86■□□□□ 0.29
SMCO4-201ENST00000298966 SLC35G3Q8N808 338 aa16.86■□□□□ 0.29
SMCO4-201ENST00000298966 OR4S2Q8NH73 311 aa16.86■□□□□ 0.29
SMCO4-201ENST00000298966 PPP1R1CQ8WVI7 109 aa16.86■□□□□ 0.29
SMCO4-201ENST00000298966 OR10C1Q96KK4 312 aa16.86■□□□□ 0.29
SMCO4-201ENST00000298966 GPHA2Q96T91 129 aa16.86■□□□□ 0.29
SMCO4-201ENST00000298966 AIFM2Q9BRQ8 373 aa16.86■□□□□ 0.29
SMCO4-201ENST00000298966 PLEKHA2Q9HB19 425 aa16.86■□□□□ 0.29
SMCO4-201ENST00000298966 ZNRD1Q9P1U0 126 aa16.86■□□□□ 0.29
SMCO4-201ENST00000298966 A0A1W2PPE3 182 aa16.85■□□□□ 0.29
SMCO4-201ENST00000298966 HPRT1P00492 218 aa16.85■□□□□ 0.29
SMCO4-201ENST00000298966 IGHV3-7P01780 117 aa16.85■□□□□ 0.29
SMCO4-201ENST00000298966 PSMB6P28072 239 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms