RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 DLX1P56177 255 aa4.05□□□□□ -1.76
UBR1-201ENST00000290650 ARF6P62330 175 aa4.05□□□□□ -1.76
UBR1-201ENST00000290650 SUPT4H1P63272 117 aaKnown RBP4.05□□□□□ -1.76
UBR1-201ENST00000290650 VMA21Q3ZAQ7 101 aa4.05□□□□□ -1.76
UBR1-201ENST00000290650 GAL3ST2Q9H3Q3 398 aa4.05□□□□□ -1.76
UBR1-201ENST00000290650 SH2D2AQ9NP31 389 aa4.05□□□□□ -1.76
UBR1-201ENST00000290650 ZNRD1Q9P1U0 126 aa4.05□□□□□ -1.76
UBR1-201ENST00000290650 DNPH1O43598 174 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 SRSF10O75494 262 aaKnown RBP4.04□□□□□ -1.76
UBR1-201ENST00000290650 CD81P60033 236 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 TNFRSF9Q07011 255 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 TGIF2LYQ8IUE0 185 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 ZNF383Q8NA42 475 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 FAM222BQ8WU58 562 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 NEIL1Q96FI4 390 aaPredicted RBP4.04□□□□□ -1.76
UBR1-201ENST00000290650 TMEM140Q9NV12 185 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 VAX2Q9UIW0 290 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 LY6G6EA0A0G2JKS1 128 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 NDUFS8O00217 210 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 TCAPO15273 167 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 CD8AP01732 235 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 BPIFB3P59826 476 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 CCL20P78556 96 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 SCGB2A2Q13296 93 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 AARDQ4LEZ3 155 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 RNFT1Q5M7Z0 435 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 RIPPLY2Q5TAB7 128 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 C17orf82Q86X59 251 aaPredicted RBP4.04□□□□□ -1.76
UBR1-201ENST00000290650 TMUB1Q9BVT8 246 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 REPIN1Q9BWE0 567 aaKnown RBP4.04□□□□□ -1.76
UBR1-201ENST00000290650 LYRM2Q9NU23 88 aaPredicted RBP4.04□□□□□ -1.76
UBR1-201ENST00000290650 CRIM1Q9NZV1 1036 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 U3KQA8 63 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 FAM208BQ5VWN6 2430 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 TRAV24A0A0B4J272 114 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 AP4M1O00189 453 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 RAB7AP51149 207 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 RHOBP62745 196 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 C20orf204Q6ZNR8 217 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 LINC00469Q8N7U9 141 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 OR2D3Q8NGH3 330 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 CHRNA10Q9GZZ6 450 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 VSIRQ9H7M9 311 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 RPRMQ9NS64 109 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 CALYQ9NYX4 217 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 IGHV3-49A0A0A0MS15 119 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 MUC21A0A0G2JKD1 596 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 MUC21A0A140T8X8 626 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 CCL3L1P16619 93 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 GZMHP20718 246 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 CNN1P51911 297 aaKnown RBP4.04□□□□□ -1.76
UBR1-201ENST00000290650 BSPH1Q075Z2 132 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 MMDQ15546 238 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 MAJINQ3KP22 176 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 GCSAMLQ5JQS6 135 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 MUC21Q5SSG8 566 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 C11orf42Q8N5U0 333 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 KDF1Q8NAX2 398 aaPredicted RBP4.04□□□□□ -1.76
UBR1-201ENST00000290650 TAF15Q92804 592 aaKnown RBP eCLIP4.04□□□□□ -1.76
UBR1-201ENST00000290650 TMEM56Q96MV1 263 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 C1QTNF5Q9BXJ0 243 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 GLRX2Q9NS18 164 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 CISD1Q9NZ45 108 aaKnown RBP4.04□□□□□ -1.76
UBR1-201ENST00000290650 PPIAL4EA0A075B759 164 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 IGHV3-66A0A0C4DH42 116 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 GRIFINA4D1Z8 144 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 PGPEP1LA6NFU8 196 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 PPIAL4DF5H284 164 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 NTN3O00634 580 aaPredicted RBP4.04□□□□□ -1.76
UBR1-201ENST00000290650 MOSP00540 346 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 SEC11BP0C7V7 166 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 PGA5P0DJD9 388 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 PPIAL4FP0DN26 164 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 MYOD1P15172 320 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 RPRMLQ8N4K4 120 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 OR1L6Q8NGR2 347 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 PPIAL4AQ9Y536 164 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 LOC389332A0A1B0GUA5 103 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 RAB29O14966 203 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 LY6HO94772 140 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 NAAAQ02083 359 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 Q6ZT83 130 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 WFDC3Q8IUB2 231 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 MUC15Q8N387 334 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 EIF4E3Q8N5X7 224 aaKnown RBP4.04□□□□□ -1.76
UBR1-201ENST00000290650 OR2T6Q8NHC8 308 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 KCNIP2Q9NS61 270 aa4.04□□□□□ -1.76
UBR1-201ENST00000290650 MALRD1Q5VYJ5 2156 aa4.03□□□□□ -1.76
UBR1-201ENST00000290650 PQLC2LA1A4F0 135 aa4.03□□□□□ -1.76
UBR1-201ENST00000290650 K7N7A8 449 aa4.03□□□□□ -1.76
UBR1-201ENST00000290650 IFI6P09912 130 aa4.03□□□□□ -1.76
UBR1-201ENST00000290650 ADCYAP1P18509 176 aa4.03□□□□□ -1.76
UBR1-201ENST00000290650 OR10J1P30954 320 aa4.03□□□□□ -1.76
UBR1-201ENST00000290650 RPL29P47914 159 aaKnown RBP4.03□□□□□ -1.76
UBR1-201ENST00000290650 PET117Q6UWS5 81 aa4.03□□□□□ -1.76
UBR1-201ENST00000290650 ACP7Q6ZNF0 438 aa4.03□□□□□ -1.76
UBR1-201ENST00000290650 SLC24A4Q8NFF2 622 aa4.03□□□□□ -1.76
UBR1-201ENST00000290650 RAB24Q969Q5 203 aa4.03□□□□□ -1.76
UBR1-201ENST00000290650 HIST1H2BAQ96A08 127 aa4.03□□□□□ -1.76
UBR1-201ENST00000290650 TM2D1Q9BX74 207 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms