RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 OR5I1Q13606 314 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 PCSK4Q6UW60 755 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 OR2M7Q8NG81 312 aa11.31□□□□□ -0.6
SCAF4-201ENST00000286835 CELSR3Q9NYQ7 3312 aa11.3□□□□□ -0.6
SCAF4-201ENST00000286835 TMEM250H0YL14 139 aa11.3□□□□□ -0.6
SCAF4-201ENST00000286835 CD1BP29016 333 aa11.3□□□□□ -0.6
SCAF4-201ENST00000286835 ATP6V1FQ16864 119 aa11.3□□□□□ -0.6
SCAF4-201ENST00000286835 R3HDM4Q96D70 268 aa11.3□□□□□ -0.6
SCAF4-201ENST00000286835 NPCDR1Q9BY65 106 aa11.3□□□□□ -0.6
SCAF4-201ENST00000286835 OR6C3Q9NZP0 311 aa11.3□□□□□ -0.6
SCAF4-201ENST00000286835 SNURFLB1AK76 121 aa11.3□□□□□ -0.6
SCAF4-201ENST00000286835 IGKV1-39P01597 117 aa11.3□□□□□ -0.6
SCAF4-201ENST00000286835 IGKV1D-39P04432 117 aa11.3□□□□□ -0.6
SCAF4-201ENST00000286835 OR10J1P30954 320 aa11.3□□□□□ -0.6
SCAF4-201ENST00000286835 SSTR5P35346 364 aa11.3□□□□□ -0.6
SCAF4-201ENST00000286835 CISD2Q8N5K1 135 aaKnown RBP11.3□□□□□ -0.6
SCAF4-201ENST00000286835 SPG11Q96JI7 2443 aa11.3□□□□□ -0.6
SCAF4-201ENST00000286835 TRAV1-1A0A0B4J248 108 aa11.3□□□□□ -0.6
SCAF4-201ENST00000286835 AMTP48728 403 aa11.3□□□□□ -0.6
SCAF4-201ENST00000286835 RND2P52198 227 aa11.3□□□□□ -0.6
SCAF4-201ENST00000286835 FOXL2NBQ6ZUU3 175 aa11.3□□□□□ -0.6
SCAF4-201ENST00000286835 HAPLN4Q86UW8 402 aa11.3□□□□□ -0.6
SCAF4-201ENST00000286835 DEFB108BQ8NET1 73 aa11.3□□□□□ -0.6
SCAF4-201ENST00000286835 SLC25A40Q8TBP6 338 aa11.3□□□□□ -0.6
SCAF4-201ENST00000286835 TRGV8A0A0C4DH27 118 aa11.29□□□□□ -0.6
SCAF4-201ENST00000286835 LRRC30A6NM36 301 aa11.29□□□□□ -0.6
SCAF4-201ENST00000286835 A8MWP6 167 aa11.29□□□□□ -0.6
SCAF4-201ENST00000286835 TMEM170AQ8WVE7 144 aa11.29□□□□□ -0.6
SCAF4-201ENST00000286835 TMEM242Q9NWH2 141 aa11.29□□□□□ -0.6
SCAF4-201ENST00000286835 ARL14EPLP0DKL9 152 aa11.29□□□□□ -0.6
SCAF4-201ENST00000286835 SPCS3P61009 180 aa11.29□□□□□ -0.6
SCAF4-201ENST00000286835 MRPL54Q6P161 138 aaKnown RBP11.29□□□□□ -0.6
SCAF4-201ENST00000286835 OR4P4Q8NGL7 312 aa11.29□□□□□ -0.6
SCAF4-201ENST00000286835 DCTN5Q9BTE1 182 aa11.29□□□□□ -0.6
SCAF4-201ENST00000286835 FAM208BQ5VWN6 2430 aa11.29□□□□□ -0.6
SCAF4-201ENST00000286835 AGFG2O95081 481 aa11.29□□□□□ -0.6
SCAF4-201ENST00000286835 SELLP14151 372 aa11.29□□□□□ -0.6
SCAF4-201ENST00000286835 ODF3L1Q8IXM7 274 aa11.29□□□□□ -0.6
SCAF4-201ENST00000286835 ZNF586Q9NXT0 402 aa11.29□□□□□ -0.6
SCAF4-201ENST00000286835 ACACBO00763 2458 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 PFN1P07737 140 aaKnown RBP11.28□□□□□ -0.6
SCAF4-201ENST00000286835 PRR27Q6MZM9 219 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 ABHD12Q8N2K0 398 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 OR1L6Q8NGR2 347 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 TAAR6Q96RI8 345 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 LRFN3Q9BTN0 628 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 SAXO1Q8IYX7 474 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 OR5AU1Q8NGC0 362 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 SEMA5BQ9P283 1151 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 MED12LQ86YW9 2145 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 IGF2RP11717 2491 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 SP1P08047 785 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 CELA3BP08861 270 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 SRP14P37108 136 aaKnown RBP11.28□□□□□ -0.6
SCAF4-201ENST00000286835 TTTY12Q9BZ98 90 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 FGF23Q9GZV9 251 aaPredicted RBP11.28□□□□□ -0.6
SCAF4-201ENST00000286835 C9orf172C9J069 976 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 H0Y8G0 127 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 IRF2P14316 349 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 RPL30P62888 115 aaKnown RBP11.28□□□□□ -0.6
SCAF4-201ENST00000286835 TMEM183BQ1AE95 376 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 ZNF585BQ52M93 769 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 TEX38Q6PEX7 206 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 TMEM251Q8N6I4 163 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 PROCRQ9UNN8 238 aa11.28□□□□□ -0.6
SCAF4-201ENST00000286835 ZNF503-AS2A6NEH8 195 aa11.27□□□□□ -0.6
SCAF4-201ENST00000286835 MARCH11A6NNE9 402 aa11.27□□□□□ -0.6
SCAF4-201ENST00000286835 ZNF883P0CG24 379 aa11.27□□□□□ -0.6
SCAF4-201ENST00000286835 CD59P13987 128 aa11.27□□□□□ -0.6
SCAF4-201ENST00000286835 MAS1LP35410 378 aa11.27□□□□□ -0.6
SCAF4-201ENST00000286835 SUMO1P63165 101 aaKnown RBP11.27□□□□□ -0.6
SCAF4-201ENST00000286835 Q8IYB0 196 aa11.27□□□□□ -0.6
SCAF4-201ENST00000286835 S1PR3Q99500 378 aa11.27□□□□□ -0.6
SCAF4-201ENST00000286835 QTRT1Q9BXR0 403 aaKnown RBP11.27□□□□□ -0.6
SCAF4-201ENST00000286835 SCO2A0A1W2PP80 73 aa11.27□□□□□ -0.61
SCAF4-201ENST00000286835 C12orf77C9JDV5 145 aa11.27□□□□□ -0.61
SCAF4-201ENST00000286835 PDE6DO43924 150 aa11.27□□□□□ -0.61
SCAF4-201ENST00000286835 B3GALT5-AS1P59052 145 aa11.27□□□□□ -0.61
SCAF4-201ENST00000286835 FXYD3Q14802 87 aa11.27□□□□□ -0.61
SCAF4-201ENST00000286835 BORCS7Q96B45 105 aa11.27□□□□□ -0.61
SCAF4-201ENST00000286835 SFRP2Q96HF1 295 aa11.27□□□□□ -0.61
SCAF4-201ENST00000286835 NOTCH2Q04721 2471 aa11.27□□□□□ -0.61
SCAF4-201ENST00000286835 C19orf67A6NJJ6 358 aa11.27□□□□□ -0.61
SCAF4-201ENST00000286835 HPRT1P00492 218 aa11.27□□□□□ -0.61
SCAF4-201ENST00000286835 RPLP1P05386 114 aaKnown RBP11.27□□□□□ -0.61
SCAF4-201ENST00000286835 ZFP36L1Q07352 338 aaKnown RBP11.27□□□□□ -0.61
SCAF4-201ENST00000286835 LBHQ53QV2 105 aaPredicted RBP11.27□□□□□ -0.61
SCAF4-201ENST00000286835 ABLIM2Q6H8Q1 611 aa11.27□□□□□ -0.61
SCAF4-201ENST00000286835 GFRALQ6UXV0 394 aa11.27□□□□□ -0.61
SCAF4-201ENST00000286835 TGIF2LYQ8IUE0 185 aa11.27□□□□□ -0.61
SCAF4-201ENST00000286835 CPAMD8Q8IZJ3 1885 aa11.27□□□□□ -0.61
SCAF4-201ENST00000286835 OR8I2Q8N0Y5 310 aa11.27□□□□□ -0.61
SCAF4-201ENST00000286835 ZNF645Q8N7E2 425 aa11.27□□□□□ -0.61
SCAF4-201ENST00000286835 LEAP2Q969E1 77 aa11.27□□□□□ -0.61
SCAF4-201ENST00000286835 YPEL4Q96NS1 127 aa11.27□□□□□ -0.61
SCAF4-201ENST00000286835 HSD17B10Q99714 261 aaKnown RBP11.27□□□□□ -0.61
SCAF4-201ENST00000286835 GOLT1BQ9Y3E0 138 aa11.27□□□□□ -0.61
SCAF4-201ENST00000286835 PXMP4Q9Y6I8 212 aa11.27□□□□□ -0.61
SCAF4-201ENST00000286835 LOC102723996A0A087X1L8 192 aa11.26□□□□□ -0.61
SCAF4-201ENST00000286835 TIGITQ495A1 244 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms