RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 IGLV3-16A0A075B6K0 115 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 CEACAM21Q3KPI0 293 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 GGTLC3B5MD39 225 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 NPIPB8E9PQR5 432 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 NPIPB9F8W1W9 429 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 CDC42EP2O14613 210 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 NPIPB7O75200 414 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 ACSF3Q4G176 576 aaPredicted RBP7.55□□□□□ -1.2
NIPBL-201ENST00000282516 DMRTA2Q96SC8 542 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 G6PC2Q9NQR9 355 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 BCORQ6W2J9 1755 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 LIFP15018 202 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 SSTR5P35346 364 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 PAX2Q02962 417 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 TMEM240Q5SV17 173 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 BIVMQ86UB2 503 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 ATOH7Q8N100 152 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 RASL10BQ96S79 203 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 NPIPB4C9JG80 1138 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 THY1P04216 161 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 ADRA2AP08913 450 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 HMGA2P52926 109 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 RUNX1Q01196 453 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 FXYD3Q14802 87 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 Q6AWC8 147 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 MARCH11A6NNE9 402 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 FOXI3A8MTJ6 420 aaPredicted RBP7.55□□□□□ -1.2
NIPBL-201ENST00000282516 C8orf88P0DMB2 117 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 ZNF250P15622 560 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 PAX1P15863 534 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 TMEM196Q5HYL7 178 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 CLDND2Q8NHS1 167 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 MGST2Q99735 147 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 CLDN16Q9Y5I7 305 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 CD1AP06126 327 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 KLK13Q9UKR3 277 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 CASP8AP2Q9UKL3 1982 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 STRCQ7RTU9 1775 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 NPIPB11E5RHQ5 1161 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 LCN2P80188 198 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 Q5PR19 223 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 EDIL3O43854 480 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 PLNP26678 52 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 GOLT1AQ6ZVE7 132 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 NDUFA2O43678 99 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 FSTP19883 344 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 EFNB2P52799 333 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 GLIPR1P48060 266 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 SERGEFQ9UGK8 458 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 PARP14Q460N5 1801 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 MDKP21741 143 aaPredicted RBP7.54□□□□□ -1.2
NIPBL-201ENST00000282516 C1orf185Q5T7R7 199 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 ALX4Q9H161 411 aaPredicted RBP7.54□□□□□ -1.2
NIPBL-201ENST00000282516 SPG11Q96JI7 2443 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 DPRXA6NFQ7 191 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 VSIG8P0DPA2 414 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 TDGF1P13385 188 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 TMEM42Q69YG0 159 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 RNF182Q8N6D2 247 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 TAF15Q92804 592 aaKnown RBP eCLIP7.54□□□□□ -1.2
NIPBL-201ENST00000282516 CLEC7AQ9BXN2 247 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 NDUFS8O00217 210 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 NPPCP23582 126 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 ZFP36L2P47974 494 aaKnown RBP7.54□□□□□ -1.2
NIPBL-201ENST00000282516 PCSK4Q6UW60 755 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 TRAV8-4A0A0B4J246 113 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 TRAV12-3A0A0B4J271 114 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 FAM90A10PA6NDY2 464 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 FAM90A18PA6NE21 464 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 FAM90A16PA6NEW6 464 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 FAM90A20PA6NIJ5 464 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 FAM90A8PA6NJQ4 464 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 FAM90A7PA6NKC0 464 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 FAM90A22PA8MWA6 464 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 FAM90A12PA8MX19 464 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 FAM90A5PA8MXJ8 464 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 FAM90A23PA8MXZ1 464 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 FAM90A15PP0C7V4 464 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 FAM90A13PP0C7W8 464 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 FAM90A14PP0C7W9 464 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 FAM90A24PP0C7X0 464 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 CENPWQ5EE01 88 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 CITED2Q99967 270 aaPredicted RBP7.54□□□□□ -1.2
NIPBL-201ENST00000282516 TNRC6CQ9HCJ0 1690 aaKnown RBP7.54□□□□□ -1.2
NIPBL-201ENST00000282516 F12P00748 615 aaPredicted RBP7.54□□□□□ -1.2
NIPBL-201ENST00000282516 CTAG1AP78358 180 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 TMEM30AQ9NV96 361 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 FLRT3Q9NZU0 649 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 SEMA5BQ9P283 1151 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 TMEM106BQ9NUM4 274 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 SLC25A15Q9Y619 301 aa7.54□□□□□ -1.2
NIPBL-201ENST00000282516 VENTXO95231 258 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 NOVP48745 357 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 TNFRSF9Q07011 255 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 MSRB3Q8IXL7 192 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 ZNF146Q15072 292 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 DUX3Q96PT4 197 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 ST6GALNAC2Q9UJ37 374 aa7.53□□□□□ -1.2
NIPBL-201ENST00000282516 COL22A1Q8NFW1 1626 aaPredicted RBP7.53□□□□□ -1.2
NIPBL-201ENST00000282516 PGPA6NDG6 321 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms