RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 FAM96BQ9Y3D0 163 aa17.14■□□□□ 0.33
YBX3-202ENST00000279550 YLPM1P49750 1951 aaKnown RBP17.13■□□□□ 0.33
YBX3-202ENST00000279550 NDUFA2O43678 99 aa17.13■□□□□ 0.33
YBX3-202ENST00000279550 KIR2DS2P43631 304 aa17.13■□□□□ 0.33
YBX3-202ENST00000279550 CAMLGP49069 296 aa17.13■□□□□ 0.33
YBX3-202ENST00000279550 THBS3P49746 956 aa17.13■□□□□ 0.33
YBX3-202ENST00000279550 TMEM14EPQ6UXP3 125 aa17.13■□□□□ 0.33
YBX3-202ENST00000279550 HEPN1Q6WQI6 88 aa17.13■□□□□ 0.33
YBX3-202ENST00000279550 NARS2Q96I59 477 aaKnown RBP17.13■□□□□ 0.33
YBX3-202ENST00000279550 TRAV3A0A0B4J244 114 aa17.13■□□□□ 0.33
YBX3-202ENST00000279550 AGPAT2O15120 278 aa17.13■□□□□ 0.33
YBX3-202ENST00000279550 DLX6P56179 175 aa17.13■□□□□ 0.33
YBX3-202ENST00000279550 OR10A7Q8NGE5 316 aa17.13■□□□□ 0.33
YBX3-202ENST00000279550 STRAPQ9Y3F4 350 aaKnown RBP17.13■□□□□ 0.33
YBX3-202ENST00000279550 DFFBO76075 338 aa17.12■□□□□ 0.33
YBX3-202ENST00000279550 F2RL1P55085 397 aa17.12■□□□□ 0.33
YBX3-202ENST00000279550 DTD1Q8TEA8 209 aa17.12■□□□□ 0.33
YBX3-202ENST00000279550 TIMD4Q96H15 378 aa17.12■□□□□ 0.33
YBX3-202ENST00000279550 TMEM218A2RU14 115 aa17.11■□□□□ 0.33
YBX3-202ENST00000279550 PPIHO43447 177 aaKnown RBP17.11■□□□□ 0.33
YBX3-202ENST00000279550 RBMXL2O75526 392 aaKnown RBP17.11■□□□□ 0.33
YBX3-202ENST00000279550 CRYZL1O95825 349 aa17.11■□□□□ 0.33
YBX3-202ENST00000279550 PRH1P02810 166 aa17.11■□□□□ 0.33
YBX3-202ENST00000279550 ZNF616Q08AN1 781 aa17.11■□□□□ 0.33
YBX3-202ENST00000279550 AARDQ4LEZ3 155 aa17.11■□□□□ 0.33
YBX3-202ENST00000279550 AVPI1Q5T686 147 aa17.11■□□□□ 0.33
YBX3-202ENST00000279550 OR4S2Q8NH73 311 aa17.11■□□□□ 0.33
YBX3-202ENST00000279550 FAM213BQ8TBF2 198 aa17.11■□□□□ 0.33
YBX3-202ENST00000279550 RAB1CQ92928 201 aa17.11■□□□□ 0.33
YBX3-202ENST00000279550 NUP50Q9UKX7 468 aa17.11■□□□□ 0.33
YBX3-202ENST00000279550 ADCYAP1P18509 176 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 RAB5CP51148 216 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 ARHGDIBP52566 201 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 RPS16P62249 146 aaKnown RBP17.1■□□□□ 0.33
YBX3-202ENST00000279550 TREM1Q9NP99 234 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 TMEM140Q9NV12 185 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 USP9YO00507 2555 aaPredicted RBP17.1■□□□□ 0.33
YBX3-202ENST00000279550 FAM90A9PA6NNJ1 464 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 CEBPZOSA8MTT3 80 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 IFNA5P01569 189 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 APOC3P02656 99 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 CT45A6P0DMU7 189 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 CT45A5P0DMU8 189 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 CT45A7P0DMV0 189 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 NQO2P16083 231 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 ERVK-16P61578 105 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 RELBQ01201 579 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 SLC38A11Q08AI6 406 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 TMEM155Q4W5P6 130 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 OR8G2PQ6IF36 304 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 ATRAIDQ6UW56 229 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 THNSL2Q86YJ6 484 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 GNPNAT1Q96EK6 184 aaPredicted RBP17.1■□□□□ 0.33
YBX3-202ENST00000279550 ADTRPQ96IZ2 230 aa17.1■□□□□ 0.33
YBX3-202ENST00000279550 IGHV4-39P01824 125 aa17.09■□□□□ 0.33
YBX3-202ENST00000279550 PMS2P5A8MQ11 134 aa17.08■□□□□ 0.32
YBX3-202ENST00000279550 C9JQL5 133 aa17.08■□□□□ 0.32
YBX3-202ENST00000279550 TRIM77I1YAP6 450 aa17.08■□□□□ 0.32
YBX3-202ENST00000279550 TSPAN15O95858 294 aa17.08■□□□□ 0.32
YBX3-202ENST00000279550 HBG1P69891 147 aa17.08■□□□□ 0.32
YBX3-202ENST00000279550 HBG2P69892 147 aa17.08■□□□□ 0.32
YBX3-202ENST00000279550 ZNF787Q6DD87 383 aa17.08■□□□□ 0.32
YBX3-202ENST00000279550 ZNF833PQ6ZTB9 187 aa17.08■□□□□ 0.32
YBX3-202ENST00000279550 LILRB2Q8N423 598 aa17.08■□□□□ 0.32
YBX3-202ENST00000279550 NRGNQ92686 78 aa17.08■□□□□ 0.32
YBX3-202ENST00000279550 RSG1Q9BU20 258 aa17.08■□□□□ 0.32
YBX3-202ENST00000279550 AKAP6Q13023 2319 aa17.08■□□□□ 0.32
YBX3-202ENST00000279550 OR4A16Q8NH70 328 aa17.07■□□□□ 0.32
YBX3-202ENST00000279550 SCRT1Q9BWW7 348 aa17.07■□□□□ 0.32
YBX3-202ENST00000279550 MRPL20Q9BYC9 149 aaKnown RBP17.07■□□□□ 0.32
YBX3-202ENST00000279550 FBXO7Q9Y3I1 522 aa17.07■□□□□ 0.32
YBX3-202ENST00000279550 FBN2P35556 2912 aa17.07■□□□□ 0.32
YBX3-202ENST00000279550 RNASEK-C17orf49H0YIS7 233 aa17.07■□□□□ 0.32
YBX3-202ENST00000279550 LRRC75BQ2VPJ9 315 aa17.07■□□□□ 0.32
YBX3-202ENST00000279550 SLC25A24Q6NUK1 477 aa17.07■□□□□ 0.32
YBX3-202ENST00000279550 ZNF841Q6ZN19 808 aa17.07■□□□□ 0.32
YBX3-202ENST00000279550 UQCC1Q9NVA1 299 aa17.07■□□□□ 0.32
YBX3-202ENST00000279550 A0A1B0GV50 99 aa17.06■□□□□ 0.32
YBX3-202ENST00000279550 C15orf62A8K5M9 175 aa17.06■□□□□ 0.32
YBX3-202ENST00000279550 UMAD1C9J7I0 102 aa17.06■□□□□ 0.32
YBX3-202ENST00000279550 IFNA17P01571 189 aa17.06■□□□□ 0.32
YBX3-202ENST00000279550 CD5P06127 495 aa17.06■□□□□ 0.32
YBX3-202ENST00000279550 SNCAP37840 140 aa17.06■□□□□ 0.32
YBX3-202ENST00000279550 GPR6P46095 362 aaPredicted RBP17.06■□□□□ 0.32
YBX3-202ENST00000279550 OR4A47Q6IF82 309 aa17.06■□□□□ 0.32
YBX3-202ENST00000279550 C11orf42Q8N5U0 333 aa17.06■□□□□ 0.32
YBX3-202ENST00000279550 RHOVQ96L33 236 aa17.06■□□□□ 0.32
YBX3-202ENST00000279550 CIB3Q96Q77 187 aaPredicted RBP17.06■□□□□ 0.32
YBX3-202ENST00000279550 HELZ2Q9BYK8 2649 aaKnown RBP17.06■□□□□ 0.32
YBX3-202ENST00000279550 SPCS3P61009 180 aa17.05■□□□□ 0.32
YBX3-202ENST00000279550 TAGLNQ01995 201 aaKnown RBP17.05■□□□□ 0.32
YBX3-202ENST00000279550 SCGB1C1Q8TD33 95 aa17.05■□□□□ 0.32
YBX3-202ENST00000279550 SLC35D1Q9NTN3 355 aa17.05■□□□□ 0.32
YBX3-202ENST00000279550 MIOXQ9UGB7 285 aa17.05■□□□□ 0.32
YBX3-202ENST00000279550 UBE2L5PA0A1B0GUS4 154 aa17.04■□□□□ 0.32
YBX3-202ENST00000279550 VDAC2P45880 294 aaPredicted RBP17.04■□□□□ 0.32
YBX3-202ENST00000279550 CCL20P78556 96 aa17.04■□□□□ 0.32
YBX3-202ENST00000279550 DEFA5Q01523 94 aa17.04■□□□□ 0.32
YBX3-202ENST00000279550 C10orf91Q5T1B1 145 aa17.04■□□□□ 0.32
YBX3-202ENST00000279550 SPSB3Q6PJ21 355 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms