RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 PPIAL4AQ9Y536 164 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 TMEM131Q92545 1883 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 C7orf77A4D0Y5 90 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 SYNGR2O43760 224 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 SPINK4O60575 86 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 ZNF737O75373 536 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 CRYBA1P05813 215 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 CD200P41217 278 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 SUB1P53999 127 aaKnown RBP eCLIP2.42□□□□□ -2.025e-7■■■■■ 33
HERC4-201ENST00000277817 ATP5J2P56134 94 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 ZP1P60852 638 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 RPS23P62266 143 aaKnown RBP2.42□□□□□ -2.02
HERC4-201ENST00000277817 ERHP84090 104 aaKnown RBP2.42□□□□□ -2.02
HERC4-201ENST00000277817 UBE2V2Q15819 145 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 GUCA2BQ16661 112 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 RTL8BQ17RB0 113 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 SNAI3Q3KNW1 292 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 ZNF658BQ4V348 819 aaPredicted RBP2.42□□□□□ -2.02
HERC4-201ENST00000277817 AWAT1Q58HT5 328 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 Q5PR19 223 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 DCAF10Q5QP82 559 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 OR2A2Q6IF42 318 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 TMEM65Q6PI78 240 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 SLC25A47Q6Q0C1 308 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 FGFRL1Q8N441 504 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 LRRC29Q8WV35 223 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 AQP3Q92482 292 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 C10orf35Q96D05 121 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 FBXO17Q96EF6 278 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 ACY3Q96HD9 319 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 FAM103A1Q9BTL3 118 aaKnown RBP2.42□□□□□ -2.02
HERC4-201ENST00000277817 TOLLIPQ9H0E2 274 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 SLC25A22Q9H936 323 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 KCNIP2Q9NS61 270 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 MPC1Q9Y5U8 109 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 MYLKQ15746 1914 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 NOTCH1P46531 2555 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 TRGV10A0A0A0MS01 117 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 IGHV1-45A0A0A0MS14 117 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 TRGV8A0A0C4DH27 118 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 MAP1LC3B2A6NCE7 125 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 OR5B21A6NL26 309 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 S100A8P05109 93 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 SCTP09683 121 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 FABP4P15090 132 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 NTF3P20783 257 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 CFHR2P36980 270 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 P2RY1P47900 373 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 THBS3P49746 956 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 NOVA1P51513 510 aaKnown RBP2.42□□□□□ -2.02
HERC4-201ENST00000277817 TMEM50BP56557 158 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 H3F3AP84243 136 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 EWSR1Q01844 656 aaKnown RBP eCLIP2.42□□□□□ -2.02
HERC4-201ENST00000277817 AESQ08117 197 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 RIGQ13278 110 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 EIF3IQ13347 325 aaKnown RBP2.42□□□□□ -2.02
HERC4-201ENST00000277817 TMEM241Q24JQ0 296 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 TIGITQ495A1 244 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 RNF212Q495C1 297 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 TEX30Q5JUR7 227 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 NCMAPQ5T1S8 102 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 STUMQ69YW2 141 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 ZNF66Q6ZN08 573 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 SLC16A13Q7RTY0 426 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 COX8CQ7Z4L0 72 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 C1QL2Q7Z5L3 287 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 APCDD1LQ8NCL9 501 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 OR2M7Q8NG81 312 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 OR10G4Q8NGN3 311 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 OR10G9Q8NGN4 311 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 OR10G7Q8NGN6 311 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 OR10D4PQ8NGN7 298 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 OR1K1Q8NGR3 316 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 CCL17Q92583 94 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 SLC35E1Q96K37 410 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 OR2J1Q9GZK6 312 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 MAP1LC3BQ9GZQ8 125 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 ZNF331Q9NQX6 463 aaPredicted RBP2.42□□□□□ -2.02
HERC4-201ENST00000277817 HS3ST3B1Q9Y662 390 aa2.42□□□□□ -2.02
HERC4-201ENST00000277817 POLQO75417 2590 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 KIAA1549Q9HCM3 1950 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 SONP18583 2426 aaKnown RBP2.41□□□□□ -2.02
HERC4-201ENST00000277817 XIRP2A4UGR9 3374 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 DCHS1Q96JQ0 3298 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 CLDN34H7C241 214 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 TRAF3IP2O43734 574 aaPredicted RBP2.41□□□□□ -2.02
HERC4-201ENST00000277817 OR2A4O95047 310 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 NDUFB4O95168 129 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 IGLV3-19P01714 112 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 FCGR3AP08637 254 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 CT45A6P0DMU7 189 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 CT45A5P0DMU8 189 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 CT45A7P0DMV0 189 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 EGR2P11161 476 aaPredicted RBP2.41□□□□□ -2.02
HERC4-201ENST00000277817 PSG2P11465 335 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 ZNF17P17021 662 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 IL3RAP26951 378 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 PMELP40967 661 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 P2RY4P51582 365 aa2.41□□□□□ -2.02
HERC4-201ENST00000277817 GAS1P54826 345 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms