RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 ZFPL1O95159 310 aa13.71□□□□□ -0.21
UBR3-201ENST00000272793 KLK2P20151 261 aa13.71□□□□□ -0.21
UBR3-201ENST00000272793 RND2P52198 227 aa13.71□□□□□ -0.21
UBR3-201ENST00000272793 ZNF142P52746 1687 aaPredicted RBP13.71□□□□□ -0.21
UBR3-201ENST00000272793 BCL2P10415 239 aa13.71□□□□□ -0.22
UBR3-201ENST00000272793 GFI1BQ5VTD9 330 aa13.71□□□□□ -0.22
UBR3-201ENST00000272793 OR8B12Q8NGG6 310 aa13.71□□□□□ -0.22
UBR3-201ENST00000272793 CCL4L1Q8NHW4 92 aa13.71□□□□□ -0.22
UBR3-201ENST00000272793 ZNF707Q96C28 371 aaPredicted RBP13.71□□□□□ -0.22
UBR3-201ENST00000272793 C4AP0C0L4 1744 aa13.71□□□□□ -0.22
UBR3-201ENST00000272793 C4BP0C0L5 1744 aa13.71□□□□□ -0.22
UBR3-201ENST00000272793 H3BTX0 84 aa13.71□□□□□ -0.22
UBR3-201ENST00000272793 DLL1O00548 723 aa13.71□□□□□ -0.22
UBR3-201ENST00000272793 QTRT1Q9BXR0 403 aaKnown RBP13.71□□□□□ -0.22
UBR3-201ENST00000272793 ISG15P05161 165 aa13.7□□□□□ -0.22
UBR3-201ENST00000272793 CXorf66Q5JRM2 361 aaPredicted RBP13.7□□□□□ -0.22
UBR3-201ENST00000272793 AGRNO00468 2067 aa13.7□□□□□ -0.22
UBR3-201ENST00000272793 GZMHP20718 246 aa13.7□□□□□ -0.22
UBR3-201ENST00000272793 C1orf185Q5T7R7 199 aa13.7□□□□□ -0.22
UBR3-201ENST00000272793 EPDR1Q9UM22 224 aa13.7□□□□□ -0.22
UBR3-201ENST00000272793 ASAH2BP0C7U1 165 aa13.7□□□□□ -0.22
UBR3-201ENST00000272793 WFDC5Q8TCV5 224 aa13.7□□□□□ -0.22
UBR3-201ENST00000272793 COQ2Q96H96 371 aa13.7□□□□□ -0.22
UBR3-201ENST00000272793 NPIPB4C9JG80 1138 aa13.7□□□□□ -0.22
UBR3-201ENST00000272793 UNQ5815/PRO19632Q6UWF5 114 aa13.7□□□□□ -0.22
UBR3-201ENST00000272793 SPTAN1Q13813 2472 aaKnown RBP13.7□□□□□ -0.22
UBR3-201ENST00000272793 IGHV3-48P01763 117 aa13.7□□□□□ -0.22
UBR3-201ENST00000272793 OR11H7Q8NGC8 314 aa13.7□□□□□ -0.22
UBR3-201ENST00000272793 MARVELD1Q9BSK0 173 aa13.7□□□□□ -0.22
UBR3-201ENST00000272793 NUP188Q5SRE5 1749 aa13.7□□□□□ -0.22
UBR3-201ENST00000272793 LOC285556D6RIA3 1793 aa13.7□□□□□ -0.22
UBR3-201ENST00000272793 SOCS1O15524 211 aa13.7□□□□□ -0.22
UBR3-201ENST00000272793 C2orf16Q68DN1 1984 aa13.7□□□□□ -0.22
UBR3-201ENST00000272793 CLDN14O95500 239 aa13.7□□□□□ -0.22
UBR3-201ENST00000272793 APOHP02749 345 aaPredicted RBP13.7□□□□□ -0.22
UBR3-201ENST00000272793 GABRG2P18507 467 aa13.7□□□□□ -0.22
UBR3-201ENST00000272793 SURF2Q15527 256 aaPredicted RBP13.7□□□□□ -0.22
UBR3-201ENST00000272793 R4GN57 208 aa13.7□□□□□ -0.22
UBR3-201ENST00000272793 SOX8P57073 446 aa13.69□□□□□ -0.22
UBR3-201ENST00000272793 CD69Q07108 199 aa13.69□□□□□ -0.22
UBR3-201ENST00000272793 MZB1Q8WU39 189 aa13.69□□□□□ -0.22
UBR3-201ENST00000272793 JMJD8Q96S16 334 aa13.69□□□□□ -0.22
UBR3-201ENST00000272793 SERGEFQ9UGK8 458 aa13.69□□□□□ -0.22
UBR3-201ENST00000272793 MPZL1O95297 269 aa13.69□□□□□ -0.22
UBR3-201ENST00000272793 TRAV5A0A0B4J249 113 aa13.69□□□□□ -0.22
UBR3-201ENST00000272793 CTDSPLO15194 276 aa13.69□□□□□ -0.22
UBR3-201ENST00000272793 LDLRAD2Q5SZI1 272 aa13.69□□□□□ -0.22
UBR3-201ENST00000272793 LRTM2Q8N967 370 aa13.69□□□□□ -0.22
UBR3-201ENST00000272793 PLPP2O43688 288 aa13.69□□□□□ -0.22
UBR3-201ENST00000272793 LEPP41159 167 aa13.69□□□□□ -0.22
UBR3-201ENST00000272793 ZNF275Q9NSD4 429 aaPredicted RBP13.69□□□□□ -0.22
UBR3-201ENST00000272793 TRBV9A0A0B4J1U6 114 aa13.69□□□□□ -0.22
UBR3-201ENST00000272793 A0A1W2PRX2 142 aa13.69□□□□□ -0.22
UBR3-201ENST00000272793 C9orf153Q5TBE3 101 aa13.69□□□□□ -0.22
UBR3-201ENST00000272793 PCSK4Q6UW60 755 aa13.69□□□□□ -0.22
UBR3-201ENST00000272793 GSN-AS1Q9NRJ2 163 aa13.69□□□□□ -0.22
UBR3-201ENST00000272793 SEMA5BQ9P283 1151 aa13.69□□□□□ -0.22
UBR3-201ENST00000272793 COX6B1P14854 86 aa13.68□□□□□ -0.22
UBR3-201ENST00000272793 FGF22Q9HCT0 170 aa13.68□□□□□ -0.22
UBR3-201ENST00000272793 YAE1D1Q9NRH1 226 aa13.68□□□□□ -0.22
UBR3-201ENST00000272793 RNF7Q9UBF6 113 aa13.68□□□□□ -0.22
UBR3-201ENST00000272793 TET2Q6N021 2002 aaPredicted RBP13.68□□□□□ -0.22
UBR3-201ENST00000272793 IGHV3-49A0A0A0MS15 119 aa13.68□□□□□ -0.22
UBR3-201ENST00000272793 IGKV6-21A0A0C4DH24 114 aa13.68□□□□□ -0.22
UBR3-201ENST00000272793 TMEM258P61165 79 aa13.68□□□□□ -0.22
UBR3-201ENST00000272793 MRGPRX3Q96LB0 322 aa13.68□□□□□ -0.22
UBR3-201ENST00000272793 MRGPRX1Q96LB2 322 aa13.68□□□□□ -0.22
UBR3-201ENST00000272793 SSBP2P81877 361 aaPredicted RBP13.68□□□□□ -0.22
UBR3-201ENST00000272793 MAFAQ8NHW3 353 aaPredicted RBP13.68□□□□□ -0.22
UBR3-201ENST00000272793 ZNF576Q9H609 170 aa13.68□□□□□ -0.22
UBR3-201ENST00000272793 SDF2L1Q9HCN8 221 aa13.68□□□□□ -0.22
UBR3-201ENST00000272793 IGHV3-23P01764 117 aa13.68□□□□□ -0.22
UBR3-201ENST00000272793 CBLN1P23435 193 aa13.68□□□□□ -0.22
UBR3-201ENST00000272793 NPPCP23582 126 aa13.68□□□□□ -0.22
UBR3-201ENST00000272793 TIMM23BQ5SRD1 257 aa13.68□□□□□ -0.22
UBR3-201ENST00000272793 C3P01024 1663 aa13.68□□□□□ -0.22
UBR3-201ENST00000272793 RPL27AP46776 148 aaKnown RBP13.67□□□□□ -0.22
UBR3-201ENST00000272793 GAGE13Q4V321 117 aa13.67□□□□□ -0.22
UBR3-201ENST00000272793 DTX2Q86UW9 622 aa13.67□□□□□ -0.22
UBR3-201ENST00000272793 STPG2Q8N412 459 aa13.67□□□□□ -0.22
UBR3-201ENST00000272793 PAX4O43316 350 aa13.67□□□□□ -0.22
UBR3-201ENST00000272793 CRYBB3P26998 211 aa13.67□□□□□ -0.22
UBR3-201ENST00000272793 IGHV3-35A0A0C4DH35 117 aa13.67□□□□□ -0.22
UBR3-201ENST00000272793 ADARB2-AS1A8MUL3 147 aa13.67□□□□□ -0.22
UBR3-201ENST00000272793 XAF1Q6GPH4 301 aa13.67□□□□□ -0.22
UBR3-201ENST00000272793 OR10W1Q8NGF6 305 aa13.67□□□□□ -0.22
UBR3-201ENST00000272793 BAALCQ8WXS3 180 aa13.67□□□□□ -0.22
UBR3-201ENST00000272793 C5orf30Q96GV9 206 aa13.67□□□□□ -0.22
UBR3-201ENST00000272793 CLEC7AQ9BXN2 247 aa13.67□□□□□ -0.22
UBR3-201ENST00000272793 HSPB1P04792 205 aaKnown RBP13.67□□□□□ -0.22
UBR3-201ENST00000272793 STHQ8IWL8 128 aa13.67□□□□□ -0.22
UBR3-201ENST00000272793 C9orf62Q8N4C0 152 aa13.67□□□□□ -0.22
UBR3-201ENST00000272793 VN1R2Q8NFZ6 395 aa13.67□□□□□ -0.22
UBR3-201ENST00000272793 SMDT1Q9H4I9 107 aa13.67□□□□□ -0.22
UBR3-201ENST00000272793 PAQR9Q6ZVX9 377 aa13.67□□□□□ -0.22
UBR3-201ENST00000272793 EEF1AKMT3Q96AZ1 226 aa13.67□□□□□ -0.22
UBR3-201ENST00000272793 SIRT4Q9Y6E7 314 aaPredicted RBP13.67□□□□□ -0.22
UBR3-201ENST00000272793 COL2A1P02458 1487 aaPredicted RBP13.67□□□□□ -0.22
UBR3-201ENST00000272793 IFI27P40305 119 aaPredicted RBP13.67□□□□□ -0.22
UBR3-201ENST00000272793 GTF3AQ92664 365 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms