RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 LOC400499M0QZD8 3231 aa22.9■■□□□ 1.26
CBX4-201ENST00000269397 SCO2A0A1W2PP80 73 aa22.9■■□□□ 1.26
CBX4-201ENST00000269397 F6UZH7 168 aa22.89■■□□□ 1.26
CBX4-201ENST00000269397 TMPRSS2O15393 492 aa22.89■■□□□ 1.26
CBX4-201ENST00000269397 MEOX1P50221 254 aa22.89■■□□□ 1.26
CBX4-201ENST00000269397 ERVFC1-1P60608 527 aa22.89■■□□□ 1.26
CBX4-201ENST00000269397 RAB4BP61018 213 aa22.89■■□□□ 1.26
CBX4-201ENST00000269397 LYZL6O75951 148 aa22.89■■□□□ 1.25
CBX4-201ENST00000269397 PRAMEF6Q5VXH4 476 aa22.89■■□□□ 1.25
CBX4-201ENST00000269397 MIC13Q5XKP0 118 aa22.89■■□□□ 1.25
CBX4-201ENST00000269397 R3HDM4Q96D70 268 aa22.89■■□□□ 1.25
CBX4-201ENST00000269397 KCNIP2Q9NS61 270 aa22.89■■□□□ 1.25
CBX4-201ENST00000269397 FOXJ2Q9P0K8 574 aa22.89■■□□□ 1.25
CBX4-201ENST00000269397 FZR1Q9UM11 496 aa22.89■■□□□ 1.25
CBX4-201ENST00000269397 MDFIC2A0A1B0GVS7 189 aa22.88■■□□□ 1.25
CBX4-201ENST00000269397 CER1O95813 267 aa22.88■■□□□ 1.25
CBX4-201ENST00000269397 ASPMQ8IZT6 3477 aa22.88■■□□□ 1.25
CBX4-201ENST00000269397 RRHO14718 337 aa22.88■■□□□ 1.25
CBX4-201ENST00000269397 SOX8P57073 446 aa22.88■■□□□ 1.25
CBX4-201ENST00000269397 CYB5R2Q6BCY4 276 aa22.88■■□□□ 1.25
CBX4-201ENST00000269397 TAAR6Q96RI8 345 aa22.88■■□□□ 1.25
CBX4-201ENST00000269397 TBX15Q96SF7 602 aa22.88■■□□□ 1.25
CBX4-201ENST00000269397 DIRC2Q96SL1 478 aa22.88■■□□□ 1.25
CBX4-201ENST00000269397 KITLGP21583 273 aa22.87■■□□□ 1.25
CBX4-201ENST00000269397 CBLN1P23435 193 aa22.87■■□□□ 1.25
CBX4-201ENST00000269397 RPL29P47914 159 aaKnown RBP22.87■■□□□ 1.25
CBX4-201ENST00000269397 FCGR3BO75015 233 aa22.87■■□□□ 1.25
CBX4-201ENST00000269397 FOXF2Q12947 444 aa22.87■■□□□ 1.25
CBX4-201ENST00000269397 FOXL1Q12952 345 aa22.87■■□□□ 1.25
CBX4-201ENST00000269397 TDRG1Q3Y452 100 aa22.87■■□□□ 1.25
CBX4-201ENST00000269397 C1orf194Q5T5A4 169 aa22.87■■□□□ 1.25
CBX4-201ENST00000269397 SLC35E4Q6ICL7 350 aa22.87■■□□□ 1.25
CBX4-201ENST00000269397 OCC1Q8TAD7 63 aa22.87■■□□□ 1.25
CBX4-201ENST00000269397 ZDHHC11Q9H8X9 412 aa22.87■■□□□ 1.25
CBX4-201ENST00000269397 AQP7O14520 342 aa22.86■■□□□ 1.25
CBX4-201ENST00000269397 CD99P14209 185 aa22.86■■□□□ 1.25
CBX4-201ENST00000269397 C11orf53Q8IXP5 236 aa22.86■■□□□ 1.25
CBX4-201ENST00000269397 SSMEM1Q8WWF3 244 aa22.86■■□□□ 1.25
CBX4-201ENST00000269397 C9orf172C9J069 976 aa22.86■■□□□ 1.25
CBX4-201ENST00000269397 SLC17A3O00476 420 aa22.86■■□□□ 1.25
CBX4-201ENST00000269397 EDDM3AQ14507 147 aa22.86■■□□□ 1.25
CBX4-201ENST00000269397 DCAF10Q5QP82 559 aa22.86■■□□□ 1.25
CBX4-201ENST00000269397 TREML4Q6UXN2 200 aa22.86■■□□□ 1.25
CBX4-201ENST00000269397 GCNT2Q8N0V5 402 aa22.86■■□□□ 1.25
CBX4-201ENST00000269397 MRPL49Q13405 166 aaKnown RBP22.85■■□□□ 1.25
CBX4-201ENST00000269397 HES4Q9HCC6 221 aa22.85■■□□□ 1.25
CBX4-201ENST00000269397 PDLIM3Q53GG5 364 aaPredicted RBP22.85■■□□□ 1.25
CBX4-201ENST00000269397 ABHD12Q8N2K0 398 aa22.85■■□□□ 1.25
CBX4-201ENST00000269397 CMTM2Q8TAZ6 248 aa22.85■■□□□ 1.25
CBX4-201ENST00000269397 KLF14Q8TD94 323 aaPredicted RBP22.85■■□□□ 1.25
CBX4-201ENST00000269397 MS4A5Q9H3V2 200 aa22.85■■□□□ 1.25
CBX4-201ENST00000269397 HEYLQ9NQ87 328 aaPredicted RBP22.85■■□□□ 1.25
CBX4-201ENST00000269397 M0R143 59 aa22.85■■□□□ 1.25
CBX4-201ENST00000269397 FRMD6-AS1P0C7T7 363 aa22.85■■□□□ 1.25
CBX4-201ENST00000269397 UBE2NP61088 152 aaKnown RBP22.85■■□□□ 1.25
CBX4-201ENST00000269397 TGFBR3Q03167 851 aa22.85■■□□□ 1.25
CBX4-201ENST00000269397 HLA-DRB5Q30154 266 aa22.85■■□□□ 1.25
CBX4-201ENST00000269397 MGST2Q99735 147 aa22.85■■□□□ 1.25
CBX4-201ENST00000269397 ABI3Q9P2A4 366 aa22.85■■□□□ 1.25
CBX4-201ENST00000269397 PROP1O75360 226 aa22.84■■□□□ 1.25
CBX4-201ENST00000269397 ZNF705AQ6ZN79 300 aaPredicted RBP22.84■■□□□ 1.25
CBX4-201ENST00000269397 TP53TG3Q9ULZ0 132 aa22.84■■□□□ 1.25
CBX4-201ENST00000269397 PRAMEF5Q5TYX0 476 aa22.84■■□□□ 1.25
CBX4-201ENST00000269397 YTHDF2Q9Y5A9 579 aaKnown RBP22.84■■□□□ 1.25
CBX4-201ENST00000269397 GPR179Q6PRD1 2367 aa22.83■■□□□ 1.25
CBX4-201ENST00000269397 TET2Q6N021 2002 aaPredicted RBP22.83■■□□□ 1.25
CBX4-201ENST00000269397 TRAV3A0A0B4J244 114 aa22.83■■□□□ 1.25
CBX4-201ENST00000269397 IQCF6A8MYZ5 107 aa22.83■■□□□ 1.25
CBX4-201ENST00000269397 OR10J1P30954 320 aa22.83■■□□□ 1.25
CBX4-201ENST00000269397 TOMM20LQ6UXN7 152 aa22.83■■□□□ 1.25
CBX4-201ENST00000269397 MSL2Q9HCI7 577 aa22.83■■□□□ 1.25
CBX4-201ENST00000269397 TIMP3P35625 211 aa22.83■■□□□ 1.24
CBX4-201ENST00000269397 ACP7Q6ZNF0 438 aa22.83■■□□□ 1.24
CBX4-201ENST00000269397 HSD17B10Q99714 261 aaKnown RBP22.83■■□□□ 1.24
CBX4-201ENST00000269397 KIR2DL5BA0A0G2JN68 375 aa22.82■■□□□ 1.24
CBX4-201ENST00000269397 KIR2DL5BA0A0G2JPC4 375 aa22.82■■□□□ 1.24
CBX4-201ENST00000269397 AGFG2O95081 481 aa22.82■■□□□ 1.24
CBX4-201ENST00000269397 Q6ZWC4 215 aa22.82■■□□□ 1.24
CBX4-201ENST00000269397 KIR2DL5AQ8N109 375 aa22.82■■□□□ 1.24
CBX4-201ENST00000269397 OR10G8Q8NGN5 311 aa22.82■■□□□ 1.24
CBX4-201ENST00000269397 Q8TCH9 128 aa22.82■■□□□ 1.24
CBX4-201ENST00000269397 ZCCHC14Q8WYQ9 949 aaKnown RBP22.82■■□□□ 1.24
CBX4-201ENST00000269397 RAB1CQ92928 201 aa22.82■■□□□ 1.24
CBX4-201ENST00000269397 SPRR3Q9UBC9 169 aa22.82■■□□□ 1.24
CBX4-201ENST00000269397 ZFHX4Q86UP3 3567 aa22.82■■□□□ 1.24
CBX4-201ENST00000269397 SP1P08047 785 aa22.82■■□□□ 1.24
CBX4-201ENST00000269397 IGHV1-2P23083 117 aa22.82■■□□□ 1.24
CBX4-201ENST00000269397 ZNF90Q03938 601 aa22.82■■□□□ 1.24
CBX4-201ENST00000269397 SPATA31B1PQ5VZV4 182 aa22.82■■□□□ 1.24
CBX4-201ENST00000269397 RYDENQ9NUL5 291 aaKnown RBP22.82■■□□□ 1.24
CBX4-201ENST00000269397 PTPRBP23467 1997 aa22.81■■□□□ 1.24
CBX4-201ENST00000269397 LINC00310P59036 64 aa22.81■■□□□ 1.24
CBX4-201ENST00000269397 RNFT1Q5M7Z0 435 aa22.81■■□□□ 1.24
CBX4-201ENST00000269397 GGTLC1Q9BX51 225 aa22.81■■□□□ 1.24
CBX4-201ENST00000269397 NCOR1O75376 2440 aa22.81■■□□□ 1.24
CBX4-201ENST00000269397 F2Z2F3 143 aa22.81■■□□□ 1.24
CBX4-201ENST00000269397 TDGF1P3P51864 188 aa22.81■■□□□ 1.24
CBX4-201ENST00000269397 ARG2P78540 354 aa22.81■■□□□ 1.24
CBX4-201ENST00000269397 TRIP6Q15654 476 aaKnown RBP22.81■■□□□ 1.24
CBX4-201ENST00000269397 OR4A16Q8NH70 328 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms