RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 QTRT1Q9BXR0 403 aaKnown RBP10.33□□□□□ -0.76
BEST3-201ENST00000266661 PLSCR4Q9NRQ2 329 aa10.33□□□□□ -0.76
BEST3-201ENST00000266661 OR6C3Q9NZP0 311 aa10.33□□□□□ -0.76
BEST3-201ENST00000266661 ZMAT5Q9UDW3 170 aaKnown RBP10.33□□□□□ -0.76
BEST3-201ENST00000266661 PITPNC1Q9UKF7 332 aa10.33□□□□□ -0.76
BEST3-201ENST00000266661 PSG11Q9UQ72 335 aa10.33□□□□□ -0.76
BEST3-201ENST00000266661 USF3Q68DE3 2245 aa10.33□□□□□ -0.76
BEST3-201ENST00000266661 KMT2BQ9UMN6 2715 aaPredicted RBP10.32□□□□□ -0.76
BEST3-201ENST00000266661 MARCH11A6NNE9 402 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 VDAC2P45880 294 aaPredicted RBP10.32□□□□□ -0.76
BEST3-201ENST00000266661 RPS16P62249 146 aaKnown RBP10.32□□□□□ -0.76
BEST3-201ENST00000266661 SMIM21Q3B7S5 101 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 Q3ZCU0 254 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 RFESDQ8TAC1 157 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 RAB1CQ92928 201 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 RPUSD4Q96CM3 377 aaKnown RBP10.32□□□□□ -0.76
BEST3-201ENST00000266661 HIST1H2BLQ99880 126 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 MSL2Q9HCI7 577 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 UFSP2Q9NUQ7 469 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 IGSF10Q6WRI0 2623 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 IGKV1D-17A0A075B6S4 117 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 IGHV2OR16-5A0A0B4J2B6 119 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 IGHV1-18A0A0C4DH31 117 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 SMCO3A2RU48 225 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 TMEM8BA6NDV4 472 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 K7ENP7 123 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 GATCO43716 136 aaKnown RBP10.32□□□□□ -0.76
BEST3-201ENST00000266661 TIMM8AO60220 97 aaPredicted RBP10.32□□□□□ -0.76
BEST3-201ENST00000266661 PAGE4O60829 102 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 GGCTO75223 188 aaKnown RBP10.32□□□□□ -0.76
BEST3-201ENST00000266661 VENTXO95231 258 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 LY86O95711 162 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 CGAP01215 116 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 TYMSP04818 313 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 EGR1P18146 543 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 PRDX2P32119 198 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 CFHR2P36980 270 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 TMPRSS3P57727 454 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 MSMPQ1L6U9 139 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 FAM169BQ8N8A8 192 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 OR52E5Q8NH55 327 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 R3HDM4Q96D70 268 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 NEIL1Q96FI4 390 aaPredicted RBP10.32□□□□□ -0.76
BEST3-201ENST00000266661 MEGF10Q96KG7 1140 aa10.32□□□□□ -0.76
BEST3-201ENST00000266661 KALRNO60229 2985 aa10.31□□□□□ -0.76
BEST3-201ENST00000266661 DEFB108AA8MXU0 73 aa10.31□□□□□ -0.76
BEST3-201ENST00000266661 SRRM5B3KS81 715 aa10.31□□□□□ -0.76
BEST3-201ENST00000266661 RBFOX2O43251 390 aaKnown RBP eCLIP10.31□□□□□ -0.76
BEST3-201ENST00000266661 CGB3P0DN86 165 aa10.31□□□□□ -0.76
BEST3-201ENST00000266661 CGB7P0DN87 165 aa10.31□□□□□ -0.76
BEST3-201ENST00000266661 PAX1P15863 534 aa10.31□□□□□ -0.76
BEST3-201ENST00000266661 FABP6P51161 128 aa10.31□□□□□ -0.76
BEST3-201ENST00000266661 LOXL3P58215 753 aa10.31□□□□□ -0.76
BEST3-201ENST00000266661 TLE1Q04724 770 aa10.31□□□□□ -0.76
BEST3-201ENST00000266661 ZNF718Q3SXZ3 478 aa10.31□□□□□ -0.76
BEST3-201ENST00000266661 MORN2Q502X0 79 aa10.31□□□□□ -0.76
BEST3-201ENST00000266661 C4orf17Q53FE4 359 aa10.31□□□□□ -0.76
BEST3-201ENST00000266661 SPINK9Q5DT21 86 aa10.31□□□□□ -0.76
BEST3-201ENST00000266661 TMEM183AQ8IXX5 376 aa10.31□□□□□ -0.76
BEST3-201ENST00000266661 OR4F5Q8NH21 305 aa10.31□□□□□ -0.76
BEST3-201ENST00000266661 ANAPC16Q96DE5 110 aa10.31□□□□□ -0.76
BEST3-201ENST00000266661 OR4F4Q96R69 305 aa10.31□□□□□ -0.76
BEST3-201ENST00000266661 ELOVL1Q9BW60 279 aa10.31□□□□□ -0.76
BEST3-201ENST00000266661 ZNF71Q9NQZ8 489 aaPredicted RBP10.31□□□□□ -0.76
BEST3-201ENST00000266661 FZR1Q9UM11 496 aa10.31□□□□□ -0.76
BEST3-201ENST00000266661 C17orf112F2Z3M2 114 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 H7BYZ3 331 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 F2RL2O00254 374 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 TMPRSS2O15393 492 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 SPINT2O43291 252 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 YPEL1O60688 119 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 TNFSF13O75888 250 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 HPRT1P00492 218 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 HRASP01112 189 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 GYPAP02724 150 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 DEFA4P12838 97 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 GALR1P47211 349 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 PDLIM4P50479 330 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 ACOT6Q3I5F7 207 aaPredicted RBP10.3□□□□□ -0.76
BEST3-201ENST00000266661 PDZD11Q5EBL8 140 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 CNEP1R1Q8N9A8 125 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 FDCSPQ8NFU4 85 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 RNASEH2CQ8TDP1 164 aaKnown RBP10.3□□□□□ -0.76
BEST3-201ENST00000266661 LRRC29Q8WV35 223 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 TMEM170AQ8WVE7 144 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 C1orf159Q96HA4 380 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 SNX22Q96L94 193 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 YPEL2Q96QA6 119 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 JPT1Q9UK76 154 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 SOX15O60248 233 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 FABP4P15090 132 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 CD1BP29016 333 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 CDC34P49427 236 aaPredicted RBP10.3□□□□□ -0.76
BEST3-201ENST00000266661 SPCS3P61009 180 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 GNB1P62873 340 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 GCSAMLQ5JQS6 135 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 C9orf152Q5JTZ5 239 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 FAM180AQ6UWF9 173 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 C1orf174Q8IYL3 243 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 ZNF709Q8N972 641 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms