RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 DIRC2Q96SL1 478 aa10.58□□□□□ -0.72
PRPF6-201ENST00000266079 MAP1LC3BQ9GZQ8 125 aa10.58□□□□□ -0.72
PRPF6-201ENST00000266079 LPAR2Q9HBW0 351 aa10.58□□□□□ -0.72
PRPF6-201ENST00000266079 TAAR3PQ9P1P4 343 aa10.58□□□□□ -0.72
PRPF6-201ENST00000266079 USF3Q68DE3 2245 aa10.58□□□□□ -0.72
PRPF6-201ENST00000266079 H3BP45 60 aa10.58□□□□□ -0.72
PRPF6-201ENST00000266079 TNFSF12O43508 249 aa10.58□□□□□ -0.72
PRPF6-201ENST00000266079 MPV17P39210 176 aa10.58□□□□□ -0.72
PRPF6-201ENST00000266079 TMEM267Q0VDI3 215 aaPredicted RBP10.58□□□□□ -0.72
PRPF6-201ENST00000266079 ASCL4Q6XD76 172 aa10.58□□□□□ -0.72
PRPF6-201ENST00000266079 COLCA1Q6ZS62 124 aa10.58□□□□□ -0.72
PRPF6-201ENST00000266079 OSR2Q8N2R0 312 aa10.58□□□□□ -0.72
PRPF6-201ENST00000266079 RPUSD4Q96CM3 377 aaKnown RBP10.58□□□□□ -0.72
PRPF6-201ENST00000266079 ANAPC16Q96DE5 110 aa10.58□□□□□ -0.72
PRPF6-201ENST00000266079 DOPEY2Q9Y3R5 2298 aa10.57□□□□□ -0.72
PRPF6-201ENST00000266079 CACNA1DQ01668 2161 aa10.57□□□□□ -0.72
PRPF6-201ENST00000266079 hCG_38984A0A1B0GV85 526 aa10.57□□□□□ -0.72
PRPF6-201ENST00000266079 BRS3P32247 399 aa10.57□□□□□ -0.72
PRPF6-201ENST00000266079 SRP14P37108 136 aaKnown RBP10.57□□□□□ -0.72
PRPF6-201ENST00000266079 MEF2BQ02080 365 aaPredicted RBP10.57□□□□□ -0.72
PRPF6-201ENST00000266079 BSPH1Q075Z2 132 aa10.57□□□□□ -0.72
PRPF6-201ENST00000266079 DMRTA1Q5VZB9 504 aa10.57□□□□□ -0.72
PRPF6-201ENST00000266079 MS4A10Q96PG2 267 aa10.57□□□□□ -0.72
PRPF6-201ENST00000266079 IMMP2LQ96T52 175 aa10.57□□□□□ -0.72
PRPF6-201ENST00000266079 POLQO75417 2590 aa10.57□□□□□ -0.72
PRPF6-201ENST00000266079 PDCD6O75340 191 aa10.57□□□□□ -0.72
PRPF6-201ENST00000266079 IGLV1-44P01699 117 aa10.57□□□□□ -0.72
PRPF6-201ENST00000266079 SERF2P84101 59 aa10.57□□□□□ -0.72
PRPF6-201ENST00000266079 ZNF818PQ6ZRF7 136 aa10.57□□□□□ -0.72
PRPF6-201ENST00000266079 LRP11Q86VZ4 500 aa10.57□□□□□ -0.72
PRPF6-201ENST00000266079 ZNF295-AS1Q8N0V1 137 aa10.57□□□□□ -0.72
PRPF6-201ENST00000266079 GAPTQ8N292 157 aa10.57□□□□□ -0.72
PRPF6-201ENST00000266079 ITLN2Q8WWU7 325 aaPredicted RBP10.57□□□□□ -0.72
PRPF6-201ENST00000266079 GPHA2Q96T91 129 aa10.57□□□□□ -0.72
PRPF6-201ENST00000266079 C20orf144Q9BQM9 153 aa10.57□□□□□ -0.72
PRPF6-201ENST00000266079 MIEN1Q9BRT3 115 aa10.57□□□□□ -0.72
PRPF6-201ENST00000266079 DPRXA6NFQ7 191 aa10.56□□□□□ -0.72
PRPF6-201ENST00000266079 C3orf80F5H4A9 247 aa10.56□□□□□ -0.72
PRPF6-201ENST00000266079 TMEM250H0YL14 139 aa10.56□□□□□ -0.72
PRPF6-201ENST00000266079 SELEP16581 610 aa10.56□□□□□ -0.72
PRPF6-201ENST00000266079 CD40P25942 277 aa10.56□□□□□ -0.72
PRPF6-201ENST00000266079 TMEM41BQ5BJD5 291 aa10.56□□□□□ -0.72
PRPF6-201ENST00000266079 NEUROG1Q92886 237 aa10.56□□□□□ -0.72
PRPF6-201ENST00000266079 RNASE6Q93091 150 aaKnown RBP10.56□□□□□ -0.72
PRPF6-201ENST00000266079 OBP2BQ9NPH6 170 aa10.56□□□□□ -0.72
PRPF6-201ENST00000266079 ST3GAL6Q9Y274 331 aa10.56□□□□□ -0.72
PRPF6-201ENST00000266079 IGKV1-12A0A0C4DH73 117 aa10.56□□□□□ -0.72
PRPF6-201ENST00000266079 CD300LBA8K4G0 201 aa10.56□□□□□ -0.72
PRPF6-201ENST00000266079 IGKV1D-12P01611 117 aa10.56□□□□□ -0.72
PRPF6-201ENST00000266079 CA6P23280 308 aa10.56□□□□□ -0.72
PRPF6-201ENST00000266079 MSMPQ1L6U9 139 aa10.56□□□□□ -0.72
PRPF6-201ENST00000266079 KLF14Q8TD94 323 aaPredicted RBP10.56□□□□□ -0.72
PRPF6-201ENST00000266079 LHX4Q969G2 390 aa10.56□□□□□ -0.72
PRPF6-201ENST00000266079 RAB40CQ96S21 281 aa10.56□□□□□ -0.72
PRPF6-201ENST00000266079 REPIN1Q9BWE0 567 aaKnown RBP10.56□□□□□ -0.72
PRPF6-201ENST00000266079 ABCA12Q86UK0 2595 aa10.56□□□□□ -0.72
PRPF6-201ENST00000266079 PDCD1Q15116 288 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 CNN3Q15417 329 aaKnown RBP10.55□□□□□ -0.72
PRPF6-201ENST00000266079 PLCXD3Q63HM9 321 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 TMEM256Q8N2U0 113 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 ZNF525Q8N782 197 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 IL22RA2Q969J5 263 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 PINX1Q96BK5 328 aaKnown RBP10.55□□□□□ -0.72
PRPF6-201ENST00000266079 BORCS8Q96FH0 119 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 PARLQ9H300 379 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 ZNF442Q9H7R0 627 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 MSL2Q9HCI7 577 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 CELSR2Q9HCU4 2923 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 C19orf84I3L1E1 186 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 PSG7Q13046 419 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 TMEM108Q6UXF1 575 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 OR5D13Q8NGL4 314 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 SDSLQ96GA7 329 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 PLPPR2Q96GM1 343 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 PLK3Q9H4B4 646 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 SLC39A9Q9NUM3 307 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 IL6RP08887 468 aaPredicted RBP10.55□□□□□ -0.72
PRPF6-201ENST00000266079 RPL15P61313 204 aaKnown RBP10.55□□□□□ -0.72
PRPF6-201ENST00000266079 LCN2P80188 198 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 LRRC75BQ2VPJ9 315 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 KCNIP4Q6PIL6 250 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 LHFPL2Q6ZUX7 228 aa10.55□□□□□ -0.72
PRPF6-201ENST00000266079 MRPL30Q8TCC3 161 aaKnown RBP10.55□□□□□ -0.72
PRPF6-201ENST00000266079 PTPN13Q12923 2485 aa10.54□□□□□ -0.72
PRPF6-201ENST00000266079 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.54□□□□□ -0.72
PRPF6-201ENST00000266079 KIAA1324LA8MWY0 1029 aaPredicted RBP10.54□□□□□ -0.72
PRPF6-201ENST00000266079 NUPR1O60356 82 aa10.54□□□□□ -0.72
PRPF6-201ENST00000266079 CLDN14O95500 239 aa10.54□□□□□ -0.72
PRPF6-201ENST00000266079 PLAUP00749 431 aa10.54□□□□□ -0.72
PRPF6-201ENST00000266079 NRASP01111 189 aa10.54□□□□□ -0.72
PRPF6-201ENST00000266079 GYPAP02724 150 aa10.54□□□□□ -0.72
PRPF6-201ENST00000266079 GNG10P50151 68 aa10.54□□□□□ -0.72
PRPF6-201ENST00000266079 GCN1Q92616 2671 aaKnown RBP10.54□□□□□ -0.72
PRPF6-201ENST00000266079 A0A0G2JRQ6 117 aa10.54□□□□□ -0.72
PRPF6-201ENST00000266079 PSMB3P49720 205 aa10.54□□□□□ -0.72
PRPF6-201ENST00000266079 ARL16Q0P5N6 197 aa10.54□□□□□ -0.72
PRPF6-201ENST00000266079 GPR146Q96CH1 333 aa10.54□□□□□ -0.72
PRPF6-201ENST00000266079 IL36GQ9NZH8 169 aa10.54□□□□□ -0.72
PRPF6-201ENST00000266079 ATP23Q9Y6H3 246 aa10.54□□□□□ -0.72
PRPF6-201ENST00000266079 IGKV1D-13A0A0B4J2D9 117 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms