RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 FLYWCH2Q96CP2 140 aaKnown RBP12.84□□□□□ -0.35
CASC3-201ENST00000264645 SMIM12Q96EX1 92 aa12.84□□□□□ -0.35
CASC3-201ENST00000264645 TIMM9Q9Y5J7 89 aa12.84□□□□□ -0.35
CASC3-201ENST00000264645 TRAV1-1A0A0B4J248 108 aa12.84□□□□□ -0.35
CASC3-201ENST00000264645 ODAMA1E959 279 aa12.84□□□□□ -0.35
CASC3-201ENST00000264645 CORTO00230 105 aa12.84□□□□□ -0.35
CASC3-201ENST00000264645 SCGB2A1O75556 95 aa12.84□□□□□ -0.35
CASC3-201ENST00000264645 BTF3P20290 206 aaKnown RBP12.84□□□□□ -0.35
CASC3-201ENST00000264645 RELQ04864 619 aaPredicted RBP12.84□□□□□ -0.35
CASC3-201ENST00000264645 ZNF324BQ6AW86 544 aaPredicted RBP12.84□□□□□ -0.35
CASC3-201ENST00000264645 MUC15Q8N387 334 aa12.84□□□□□ -0.35
CASC3-201ENST00000264645 OR2Z1Q8NG97 314 aa12.84□□□□□ -0.35
CASC3-201ENST00000264645 FAM131CQ96AQ9 280 aa12.84□□□□□ -0.35
CASC3-201ENST00000264645 CACNA1GO43497 2377 aa12.84□□□□□ -0.35
CASC3-201ENST00000264645 RRHO14718 337 aa12.84□□□□□ -0.35
CASC3-201ENST00000264645 HBZP02008 142 aa12.84□□□□□ -0.35
CASC3-201ENST00000264645 PRSS1P07477 247 aa12.84□□□□□ -0.35
CASC3-201ENST00000264645 GCHFRP30047 84 aa12.84□□□□□ -0.35
CASC3-201ENST00000264645 OR10X1Q8NGY0 326 aa12.84□□□□□ -0.35
CASC3-201ENST00000264645 FSCN3Q9NQT6 498 aa12.84□□□□□ -0.35
CASC3-201ENST00000264645 VWA8A3KMH1 1905 aa12.83□□□□□ -0.35
CASC3-201ENST00000264645 TRBV9A0A0B4J1U6 114 aa12.83□□□□□ -0.36
CASC3-201ENST00000264645 CEACAM18A8MTB9 384 aa12.83□□□□□ -0.36
CASC3-201ENST00000264645 CIDEAO60543 219 aa12.83□□□□□ -0.36
CASC3-201ENST00000264645 CNIH1O95406 144 aa12.83□□□□□ -0.36
CASC3-201ENST00000264645 UMODP07911 640 aa12.83□□□□□ -0.36
CASC3-201ENST00000264645 TMEM140Q9NV12 185 aa12.83□□□□□ -0.36
CASC3-201ENST00000264645 OR4C46A6NHA9 309 aa12.83□□□□□ -0.36
CASC3-201ENST00000264645 CEBPDP49716 269 aaPredicted RBP12.83□□□□□ -0.36
CASC3-201ENST00000264645 OCC1Q8TAD7 63 aa12.83□□□□□ -0.36
CASC3-201ENST00000264645 LRRC29Q8WV35 223 aa12.83□□□□□ -0.36
CASC3-201ENST00000264645 IL36GQ9NZH8 169 aa12.83□□□□□ -0.36
CASC3-201ENST00000264645 C3orf80F5H4A9 247 aa12.83□□□□□ -0.36
CASC3-201ENST00000264645 PLAUP00749 431 aa12.83□□□□□ -0.36
CASC3-201ENST00000264645 TMEM45BQ96B21 275 aa12.83□□□□□ -0.36
CASC3-201ENST00000264645 TMEM70Q9BUB7 260 aa12.83□□□□□ -0.36
CASC3-201ENST00000264645 TRGV10A0A0A0MS01 117 aa12.82□□□□□ -0.36
CASC3-201ENST00000264645 A0A1W2PRS3 328 aa12.82□□□□□ -0.36
CASC3-201ENST00000264645 WIPF3A6NGB9 483 aa12.82□□□□□ -0.36
CASC3-201ENST00000264645 GCSAMLQ5JQS6 135 aa12.82□□□□□ -0.36
CASC3-201ENST00000264645 ZNF355PQ9NSJ1 428 aa12.82□□□□□ -0.36
CASC3-201ENST00000264645 ACSF3Q4G176 576 aaPredicted RBP12.82□□□□□ -0.36
CASC3-201ENST00000264645 C9orf50Q5SZB4 431 aa12.82□□□□□ -0.36
CASC3-201ENST00000264645 S100A7AQ86SG5 101 aa12.82□□□□□ -0.36
CASC3-201ENST00000264645 VKORC1L1Q8N0U8 176 aa12.82□□□□□ -0.36
CASC3-201ENST00000264645 DERL1Q9BUN8 251 aa12.82□□□□□ -0.36
CASC3-201ENST00000264645 A0A1B0GWJ7 208 aa12.82□□□□□ -0.36
CASC3-201ENST00000264645 OR2J3O76001 311 aa12.82□□□□□ -0.36
CASC3-201ENST00000264645 CFPP27918 469 aa12.82□□□□□ -0.36
CASC3-201ENST00000264645 MRPS11P82912 194 aaKnown RBP12.82□□□□□ -0.36
CASC3-201ENST00000264645 RNASEH2CQ8TDP1 164 aaKnown RBP12.82□□□□□ -0.36
CASC3-201ENST00000264645 ZNF501Q96CX3 271 aaPredicted RBP12.82□□□□□ -0.36
CASC3-201ENST00000264645 PEF1Q9UBV8 284 aaKnown RBP12.82□□□□□ -0.36
CASC3-201ENST00000264645 LYZL6O75951 148 aa12.81□□□□□ -0.36
CASC3-201ENST00000264645 PFN1P07737 140 aaKnown RBP12.81□□□□□ -0.36
CASC3-201ENST00000264645 LINC00869P0C866 280 aa12.81□□□□□ -0.36
CASC3-201ENST00000264645 TRA2AQ13595 282 aaKnown RBP eCLIP12.81□□□□□ -0.362e-6■■■□□ 15.8
CASC3-201ENST00000264645 OR1B1Q8NGR6 318 aa12.81□□□□□ -0.36
CASC3-201ENST00000264645 WNT5BQ9H1J7 359 aa12.81□□□□□ -0.36
CASC3-201ENST00000264645 IGKV1-12A0A0C4DH73 117 aa12.81□□□□□ -0.36
CASC3-201ENST00000264645 CGAP01215 116 aa12.81□□□□□ -0.36
CASC3-201ENST00000264645 IGKV1D-12P01611 117 aa12.81□□□□□ -0.36
CASC3-201ENST00000264645 RIPPLY3P57055 190 aa12.81□□□□□ -0.36
CASC3-201ENST00000264645 KCNMB1Q16558 191 aa12.81□□□□□ -0.36
CASC3-201ENST00000264645 ACTL10Q5JWF8 245 aa12.81□□□□□ -0.36
CASC3-201ENST00000264645 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.81□□□□□ -0.36
CASC3-201ENST00000264645 FER1L5A0AVI2 2057 aa12.81□□□□□ -0.36
CASC3-201ENST00000264645 LOC389332A0A1B0GUA5 103 aa12.81□□□□□ -0.36
CASC3-201ENST00000264645 J3QR06 171 aa12.81□□□□□ -0.36
CASC3-201ENST00000264645 CLDN14O95500 239 aa12.81□□□□□ -0.36
CASC3-201ENST00000264645 CCL1P22362 96 aa12.81□□□□□ -0.36
CASC3-201ENST00000264645 C3AR1Q16581 482 aa12.81□□□□□ -0.36
CASC3-201ENST00000264645 LINC00596Q86U02 117 aa12.81□□□□□ -0.36
CASC3-201ENST00000264645 ZNF645Q8N7E2 425 aa12.81□□□□□ -0.36
CASC3-201ENST00000264645 KCNS1Q96KK3 526 aa12.81□□□□□ -0.36
CASC3-201ENST00000264645 CNOT1A5YKK6 2376 aaKnown RBP12.81□□□□□ -0.36
CASC3-201ENST00000264645 LINC01551Q86U37 167 aa12.81□□□□□ -0.36
CASC3-201ENST00000264645 RNASE7Q9H1E1 156 aaKnown RBP12.81□□□□□ -0.36
CASC3-201ENST00000264645 IGHV1OR15-9A0A0B4J2B8 117 aa12.8□□□□□ -0.36
CASC3-201ENST00000264645 A8MWL6 223 aa12.8□□□□□ -0.36
CASC3-201ENST00000264645 ZNF324O75467 553 aaPredicted RBP12.8□□□□□ -0.36
CASC3-201ENST00000264645 HLA-DRB1P01911 266 aa12.8□□□□□ -0.36
CASC3-201ENST00000264645 FABP2P12104 132 aa12.8□□□□□ -0.36
CASC3-201ENST00000264645 GPR6P46095 362 aaPredicted RBP12.8□□□□□ -0.36
CASC3-201ENST00000264645 C10orf128Q5T292 105 aa12.8□□□□□ -0.36
CASC3-201ENST00000264645 SPINK14Q6IE38 97 aa12.8□□□□□ -0.36
CASC3-201ENST00000264645 LCN12Q6JVE5 192 aa12.8□□□□□ -0.36
CASC3-201ENST00000264645 SPTBN2O15020 2390 aa12.8□□□□□ -0.36
CASC3-201ENST00000264645 hCG_38984A0A1B0GV85 526 aa12.8□□□□□ -0.36
CASC3-201ENST00000264645 SPRY3O43610 288 aa12.8□□□□□ -0.36
CASC3-201ENST00000264645 CPEB3Q8NE35 698 aaKnown RBP12.8□□□□□ -0.36
CASC3-201ENST00000264645 PLA2G2EQ9NZK7 142 aa12.8□□□□□ -0.36
CASC3-201ENST00000264645 ZNF407Q9C0G0 2248 aa12.8□□□□□ -0.36
CASC3-201ENST00000264645 ZNF826PQ6ZT77 177 aa12.79□□□□□ -0.36
CASC3-201ENST00000264645 NXPH1P58417 271 aa12.79□□□□□ -0.36
CASC3-201ENST00000264645 NMSQ5H8A3 153 aa12.79□□□□□ -0.36
CASC3-201ENST00000264645 STPG3Q8N7X2 389 aa12.79□□□□□ -0.36
CASC3-201ENST00000264645 PMCHL2Q9BQD1 86 aa12.79□□□□□ -0.36
CASC3-201ENST00000264645 CACNA1HO95180 2353 aa12.79□□□□□ -0.36
CASC3-201ENST00000264645 DENND4AQ7Z401 1863 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms