RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 AADACP22760 399 aa12.37□□□□□ -0.43
USE1-201ENST00000263897 FCGR2CP31995 323 aa12.37□□□□□ -0.43
USE1-201ENST00000263897 CDK10Q15131 360 aa12.37□□□□□ -0.43
USE1-201ENST00000263897 MFSD4AQ8N468 514 aa12.37□□□□□ -0.43
USE1-201ENST00000263897 SRSF12Q8WXF0 261 aaKnown RBP12.37□□□□□ -0.43
USE1-201ENST00000263897 S100A16Q96FQ6 103 aaKnown RBP12.37□□□□□ -0.43
USE1-201ENST00000263897 PHB2Q99623 299 aa12.37□□□□□ -0.43
USE1-201ENST00000263897 ZNF430Q9H8G1 570 aaPredicted RBP12.37□□□□□ -0.43
USE1-201ENST00000263897 RANGRFQ9HD47 186 aaPredicted RBP12.37□□□□□ -0.43
USE1-201ENST00000263897 MRPS7Q9Y2R9 242 aaKnown RBP12.37□□□□□ -0.43
USE1-201ENST00000263897 XRCC3O43542 346 aa12.36□□□□□ -0.43
USE1-201ENST00000263897 APELAP0DMC3 54 aa12.36□□□□□ -0.43
USE1-201ENST00000263897 CBX5P45973 191 aa12.36□□□□□ -0.43
USE1-201ENST00000263897 BRWD1-AS2P59051 145 aa12.36□□□□□ -0.43
USE1-201ENST00000263897 LSM3P62310 102 aaKnown RBP12.36□□□□□ -0.43
USE1-201ENST00000263897 OR2B11Q5JQS5 317 aa12.36□□□□□ -0.43
USE1-201ENST00000263897 C11orf87Q6NUJ2 197 aa12.36□□□□□ -0.43
USE1-201ENST00000263897 ZNF66Q6ZN08 573 aa12.36□□□□□ -0.43
USE1-201ENST00000263897 MMD2Q8IY49 270 aa12.36□□□□□ -0.43
USE1-201ENST00000263897 ACOT12Q8WYK0 555 aa12.36□□□□□ -0.43
USE1-201ENST00000263897 CCL28Q9NRJ3 127 aa12.36□□□□□ -0.43
USE1-201ENST00000263897 COA4Q9NYJ1 87 aa12.36□□□□□ -0.43
USE1-201ENST00000263897 TRIM64CA6NLI5 447 aa12.35□□□□□ -0.43
USE1-201ENST00000263897 CREBL2O60519 120 aaPredicted RBP12.35□□□□□ -0.43
USE1-201ENST00000263897 ACTL6BO94805 426 aa12.35□□□□□ -0.43
USE1-201ENST00000263897 FCER2P06734 321 aa12.35□□□□□ -0.43
USE1-201ENST00000263897 OR9G9P0C7N8 305 aa12.35□□□□□ -0.43
USE1-201ENST00000263897 MSMO1Q15800 293 aa12.35□□□□□ -0.43
USE1-201ENST00000263897 ADAD2Q8NCV1 583 aaKnown RBP12.35□□□□□ -0.43
USE1-201ENST00000263897 OR4S2Q8NH73 311 aa12.35□□□□□ -0.43
USE1-201ENST00000263897 SECTM1Q8WVN6 248 aa12.35□□□□□ -0.43
USE1-201ENST00000263897 TCTEX1D2Q8WW35 142 aa12.35□□□□□ -0.43
USE1-201ENST00000263897 GIMAP1Q8WWP7 306 aa12.35□□□□□ -0.43
USE1-201ENST00000263897 USMG5Q96IX5 58 aa12.35□□□□□ -0.43
USE1-201ENST00000263897 OR4C12Q96R67 309 aa12.35□□□□□ -0.43
USE1-201ENST00000263897 TAS2R8Q9NYW2 309 aa12.35□□□□□ -0.43
USE1-201ENST00000263897 ANKRD34BA5PLL1 514 aa12.34□□□□□ -0.43
USE1-201ENST00000263897 LY86O95711 162 aa12.34□□□□□ -0.43
USE1-201ENST00000263897 PPYP01298 95 aa12.34□□□□□ -0.43
USE1-201ENST00000263897 ZP3P21754 424 aa12.34□□□□□ -0.43
USE1-201ENST00000263897 UBE2NLQ5JXB2 153 aa12.34□□□□□ -0.43
USE1-201ENST00000263897 ZNF343Q6P1L6 599 aa12.34□□□□□ -0.43
USE1-201ENST00000263897 VKORC1L1Q8N0U8 176 aa12.34□□□□□ -0.43
USE1-201ENST00000263897 SAMD12Q8N8I0 201 aa12.34□□□□□ -0.43
USE1-201ENST00000263897 ZBTB34Q8NCN2 500 aa12.34□□□□□ -0.43
USE1-201ENST00000263897 OR5AP2Q8NGF4 316 aa12.34□□□□□ -0.43
USE1-201ENST00000263897 OR13F1Q8NGS4 319 aa12.34□□□□□ -0.43
USE1-201ENST00000263897 SNAPC3Q92966 411 aa12.34□□□□□ -0.43
USE1-201ENST00000263897 GPHA2Q96T91 129 aa12.34□□□□□ -0.43
USE1-201ENST00000263897 SPIN2AQ99865 258 aa12.34□□□□□ -0.43
USE1-201ENST00000263897 SPIN2BQ9BPZ2 258 aa12.34□□□□□ -0.43
USE1-201ENST00000263897 MEIS3P1A6NDR6 274 aa12.33□□□□□ -0.44
USE1-201ENST00000263897 MPPED1O15442 326 aa12.33□□□□□ -0.44
USE1-201ENST00000263897 RBMXL2O75526 392 aaKnown RBP12.33□□□□□ -0.44
USE1-201ENST00000263897 OR2A4O95047 310 aa12.33□□□□□ -0.44
USE1-201ENST00000263897 NHLRC4P0CG21 123 aaPredicted RBP12.33□□□□□ -0.44
USE1-201ENST00000263897 SPNP16150 400 aa12.33□□□□□ -0.44
USE1-201ENST00000263897 DYRK1AQ13627 763 aa12.33□□□□□ -0.44
USE1-201ENST00000263897 KLF5Q13887 457 aaPredicted RBP12.33□□□□□ -0.44
USE1-201ENST00000263897 PUSL1Q8N0Z8 303 aaKnown RBP12.33□□□□□ -0.44
USE1-201ENST00000263897 TTC9CQ8N5M4 171 aa12.33□□□□□ -0.44
USE1-201ENST00000263897 VSTM2AQ8TAG5 236 aa12.33□□□□□ -0.44
USE1-201ENST00000263897 TMEM167AQ8TBQ9 72 aa12.33□□□□□ -0.44
USE1-201ENST00000263897 SLC25A46Q96AG3 418 aa12.33□□□□□ -0.44
USE1-201ENST00000263897 OR2A7Q96R45 310 aa12.33□□□□□ -0.44
USE1-201ENST00000263897 ELOVL1Q9BW60 279 aa12.33□□□□□ -0.44
USE1-201ENST00000263897 SLC5A7Q9GZV3 580 aa12.33□□□□□ -0.44
USE1-201ENST00000263897 PEF1Q9UBV8 284 aaKnown RBP12.33□□□□□ -0.44
USE1-201ENST00000263897 TNFSF12O43508 249 aa12.32□□□□□ -0.44
USE1-201ENST00000263897 HRASP01112 189 aa12.32□□□□□ -0.44
USE1-201ENST00000263897 KIR2DS2P43631 304 aa12.32□□□□□ -0.44
USE1-201ENST00000263897 DEFA5Q01523 94 aa12.32□□□□□ -0.44
USE1-201ENST00000263897 C10orf55Q5SWW7 151 aa12.32□□□□□ -0.44
USE1-201ENST00000263897 DHRS11Q6UWP2 260 aa12.32□□□□□ -0.44
USE1-201ENST00000263897 OR6Q1Q8NGQ2 317 aa12.32□□□□□ -0.44
USE1-201ENST00000263897 KCTD12Q96CX2 325 aaKnown RBP12.32□□□□□ -0.44
USE1-201ENST00000263897 FUNDC2Q9BWH2 189 aa12.32□□□□□ -0.44
USE1-201ENST00000263897 SMAD5-AS1Q9Y6J3 95 aa12.32□□□□□ -0.44
USE1-201ENST00000263897 TENM3Q9P273 2699 aa12.32□□□□□ -0.44
USE1-201ENST00000263897 TRBV9A0A0B4J1U6 114 aa12.31□□□□□ -0.44
USE1-201ENST00000263897 KBTBD11O94819 623 aa12.31□□□□□ -0.44
USE1-201ENST00000263897 IL6RP08887 468 aaPredicted RBP12.31□□□□□ -0.44
USE1-201ENST00000263897 MAS1LP35410 378 aa12.31□□□□□ -0.44
USE1-201ENST00000263897 TAS2R20P59543 309 aa12.31□□□□□ -0.44
USE1-201ENST00000263897 FXYD4P59646 89 aa12.31□□□□□ -0.44
USE1-201ENST00000263897 TMEM69Q5SWH9 247 aa12.31□□□□□ -0.44
USE1-201ENST00000263897 SPAG16Q8N0X2 631 aa12.31□□□□□ -0.44
USE1-201ENST00000263897 AIFM2Q9BRQ8 373 aa12.31□□□□□ -0.44
USE1-201ENST00000263897 AKIP1Q9NQ31 210 aa12.31□□□□□ -0.44
USE1-201ENST00000263897 IFT46Q9NQC8 304 aa12.31□□□□□ -0.44
USE1-201ENST00000263897 HMX3A6NHT5 357 aa12.3□□□□□ -0.44
USE1-201ENST00000263897 FAM223BA6NKX1 122 aa12.3□□□□□ -0.44
USE1-201ENST00000263897 E7EUB6 86 aa12.3□□□□□ -0.44
USE1-201ENST00000263897 RBFOX2O43251 390 aaKnown RBP eCLIP12.3□□□□□ -0.44
USE1-201ENST00000263897 TRBV12-3P01733 135 aa12.3□□□□□ -0.44
USE1-201ENST00000263897 PRH1P02810 166 aa12.3□□□□□ -0.44
USE1-201ENST00000263897 GP9P14770 177 aa12.3□□□□□ -0.44
USE1-201ENST00000263897 NAT1P18440 290 aa12.3□□□□□ -0.44
USE1-201ENST00000263897 PRSS3P35030 304 aa12.3□□□□□ -0.44
USE1-201ENST00000263897 RFX2P48378 723 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms