RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 CD74P04233 296 aa14.66□□□□□ -0.06
SDF4-201ENST00000263741 NMBP08949 121 aa14.66□□□□□ -0.06
SDF4-201ENST00000263741 NUP62P37198 522 aaPredicted RBP14.66□□□□□ -0.06
SDF4-201ENST00000263741 ZNF660Q6AZW8 331 aaPredicted RBP14.66□□□□□ -0.06
SDF4-201ENST00000263741 DHRS7BQ6IAN0 325 aaPredicted RBP14.66□□□□□ -0.06
SDF4-201ENST00000263741 TMED4Q7Z7H5 227 aa14.66□□□□□ -0.06
SDF4-201ENST00000263741 COQ8AQ8NI60 647 aa14.66□□□□□ -0.06
SDF4-201ENST00000263741 SLC25A33Q9BSK2 321 aa14.66□□□□□ -0.06
SDF4-201ENST00000263741 SH2D7A6NKC9 451 aaPredicted RBP14.65□□□□□ -0.06
SDF4-201ENST00000263741 IGLV2-14P01704 120 aa14.65□□□□□ -0.06
SDF4-201ENST00000263741 TMEM11P17152 192 aa14.65□□□□□ -0.06
SDF4-201ENST00000263741 UBE2MP61081 183 aaKnown RBP14.65□□□□□ -0.06
SDF4-201ENST00000263741 ALKAL2Q6UX46 152 aa14.65□□□□□ -0.06
SDF4-201ENST00000263741 C1RLQ9NZP8 487 aa14.65□□□□□ -0.06
SDF4-201ENST00000263741 FAM106CPP0CH98 169 aa14.65□□□□□ -0.06
SDF4-201ENST00000263741 TAGLNQ01995 201 aaKnown RBP14.65□□□□□ -0.06
SDF4-201ENST00000263741 C2orf68Q2NKX9 166 aa14.65□□□□□ -0.06
SDF4-201ENST00000263741 FAM71F2Q6NXP2 309 aa14.65□□□□□ -0.06
SDF4-201ENST00000263741 ZNF383Q8NA42 475 aa14.65□□□□□ -0.06
SDF4-201ENST00000263741 EAF1Q96JC9 268 aaPredicted RBP14.65□□□□□ -0.06
SDF4-201ENST00000263741 CCL28Q9NRJ3 127 aa14.65□□□□□ -0.06
SDF4-201ENST00000263741 COMMD9Q9P000 198 aa14.65□□□□□ -0.06
SDF4-201ENST00000263741 PLXNB1O43157 2135 aa14.65□□□□□ -0.06
SDF4-201ENST00000263741 A0A0D9SG52 128 aa14.64□□□□□ -0.07
SDF4-201ENST00000263741 HERV-K104P61576 105 aa14.64□□□□□ -0.07
SDF4-201ENST00000263741 RNASE10Q5GAN6 216 aaKnown RBP14.64□□□□□ -0.07
SDF4-201ENST00000263741 ZNF645Q8N7E2 425 aa14.64□□□□□ -0.07
SDF4-201ENST00000263741 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.64□□□□□ -0.07
SDF4-201ENST00000263741 RITA1Q96K30 269 aa14.64□□□□□ -0.07
SDF4-201ENST00000263741 SLC2A8Q9NY64 477 aa14.64□□□□□ -0.07
SDF4-201ENST00000263741 PITPNC1Q9UKF7 332 aa14.64□□□□□ -0.07
SDF4-201ENST00000263741 LOC105371267A0A1B0GV96 52 aa14.64□□□□□ -0.07
SDF4-201ENST00000263741 TNFSF12O43508 249 aa14.64□□□□□ -0.07
SDF4-201ENST00000263741 SCO1O75880 301 aa14.64□□□□□ -0.07
SDF4-201ENST00000263741 CRYBA1P05813 215 aa14.64□□□□□ -0.07
SDF4-201ENST00000263741 SCGB2B2Q4G0G5 96 aa14.64□□□□□ -0.07
SDF4-201ENST00000263741 SLC38A6Q8IZM9 456 aa14.64□□□□□ -0.07
SDF4-201ENST00000263741 OR5M8Q8NGP6 311 aa14.64□□□□□ -0.07
SDF4-201ENST00000263741 SLC5A7Q9GZV3 580 aa14.64□□□□□ -0.07
SDF4-201ENST00000263741 H0YJW9 148 aa14.63□□□□□ -0.07
SDF4-201ENST00000263741 CD1BP29016 333 aa14.63□□□□□ -0.07
SDF4-201ENST00000263741 Q6ZS46 218 aa14.63□□□□□ -0.07
SDF4-201ENST00000263741 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.63□□□□□ -0.07
SDF4-201ENST00000263741 TMEM158Q8WZ71 300 aa14.63□□□□□ -0.07
SDF4-201ENST00000263741 WDR89Q96FK6 387 aaPredicted RBP14.63□□□□□ -0.07
SDF4-201ENST00000263741 CXorf58Q96LI9 332 aa14.63□□□□□ -0.07
SDF4-201ENST00000263741 PDCD10Q9BUL8 212 aa14.63□□□□□ -0.07
SDF4-201ENST00000263741 LINC00473A8K010 186 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 H7C2Y5 167 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 TBPP20226 339 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 CNTFRP26992 372 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 ACTBL2Q562R1 376 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 OR2B11Q5JQS5 317 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 VAX1Q5SQQ9 334 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 Q6ZSV7 163 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 HSD17B13Q7Z5P4 300 aaPredicted RBP14.62□□□□□ -0.07
SDF4-201ENST00000263741 MOB3AQ96BX8 217 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 RBM14Q96PK6 669 aaKnown RBP14.62□□□□□ -0.07
SDF4-201ENST00000263741 SLC25A32Q9H2D1 315 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 SIGLEC9Q9Y336 463 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 KANTRA0A1W2PQU2 76 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 OR5H14A6NHG9 310 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 OR2F2O95006 317 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 HLA-AP01891 365 aaKnown RBP14.62□□□□□ -0.07
SDF4-201ENST00000263741 BLCAPP62952 87 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 DHRS2Q13268 280 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 ZNF345Q14585 488 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 DHRS11Q6UWP2 260 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 ZNF546Q86UE3 836 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 THNSL2Q86YJ6 484 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 Q8N6K4 173 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 OR2T10Q8NGZ9 312 aa14.62□□□□□ -0.07
SDF4-201ENST00000263741 MOSP00540 346 aa14.61□□□□□ -0.07
SDF4-201ENST00000263741 IGKV1-16P04430 117 aa14.61□□□□□ -0.07
SDF4-201ENST00000263741 ZNF735P0CB33 412 aa14.61□□□□□ -0.07
SDF4-201ENST00000263741 F2RL1P55085 397 aa14.61□□□□□ -0.07
SDF4-201ENST00000263741 RPL30P62888 115 aaKnown RBP14.61□□□□□ -0.07
SDF4-201ENST00000263741 SRSF4Q08170 494 aaKnown RBP14.61□□□□□ -0.07
SDF4-201ENST00000263741 LIAT1Q6ZQX7 453 aa14.61□□□□□ -0.07
SDF4-201ENST00000263741 ZNF818PQ6ZRF7 136 aa14.61□□□□□ -0.07
SDF4-201ENST00000263741 OR5AN1Q8NGI8 311 aa14.61□□□□□ -0.07
SDF4-201ENST00000263741 AMY1AP04745 511 aa14.61□□□□□ -0.07
SDF4-201ENST00000263741 IFNA6P05013 189 aa14.61□□□□□ -0.07
SDF4-201ENST00000263741 HKR1P10072 659 aa14.61□□□□□ -0.07
SDF4-201ENST00000263741 MDKP21741 143 aaPredicted RBP14.61□□□□□ -0.07
SDF4-201ENST00000263741 DUTP33316 252 aaKnown RBP14.61□□□□□ -0.07
SDF4-201ENST00000263741 OR2F1Q13607 317 aa14.61□□□□□ -0.07
SDF4-201ENST00000263741 EBI3Q14213 229 aa14.61□□□□□ -0.07
SDF4-201ENST00000263741 TMEM95Q3KNT9 176 aa14.61□□□□□ -0.07
SDF4-201ENST00000263741 MOB4Q9Y3A3 225 aa14.61□□□□□ -0.07
SDF4-201ENST00000263741 WASHC3Q9Y3C0 194 aa14.61□□□□□ -0.07
SDF4-201ENST00000263741 NCBP2LA6PVI3 153 aaKnown RBP14.6□□□□□ -0.07
SDF4-201ENST00000263741 SPDEFO95238 335 aa14.6□□□□□ -0.07
SDF4-201ENST00000263741 SLC25A4P12235 298 aa14.6□□□□□ -0.07
SDF4-201ENST00000263741 ABCA11PQ4W5N1 156 aa14.6□□□□□ -0.07
SDF4-201ENST00000263741 AADACL3Q5VUY0 350 aa14.6□□□□□ -0.07
SDF4-201ENST00000263741 KCTD9Q7L273 389 aa14.6□□□□□ -0.07
SDF4-201ENST00000263741 LYG2Q86SG7 212 aa14.6□□□□□ -0.07
SDF4-201ENST00000263741 SLC25A42Q86VD7 318 aa14.6□□□□□ -0.07
SDF4-201ENST00000263741 LINC00052Q96N35 136 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms