RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 LCN12Q6JVE5 192 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 TCF24Q7RTU0 167 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 MRPL21Q7Z2W9 205 aaKnown RBP12.01□□□□□ -0.49
SCARF1-201ENST00000263071 RPS19BP1Q86WX3 136 aaKnown RBP12.01□□□□□ -0.49
SCARF1-201ENST00000263071 TP53TG3Q9ULZ0 132 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 MPPED1O15442 326 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 RFPL3SP0C7P2 107 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 PTGDSP41222 190 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 ZNF90Q03938 601 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 HLA-DRB5Q30154 266 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 C12orf54Q6X4T0 127 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 ZNF788Q6ZQV5 615 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 CCDC71LQ8N9Z2 235 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 GEMIN7Q9H840 131 aaKnown RBP12.01□□□□□ -0.49
SCARF1-201ENST00000263071 GPR27Q9NS67 375 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 ZNF318Q5VUA4 2279 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 IGKV1D-13A0A0B4J2D9 117 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 PATE3B3GLJ2 98 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 IGKV1-13P0DP09 117 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 GPR6P46095 362 aaPredicted RBP12.01□□□□□ -0.49
SCARF1-201ENST00000263071 PSG4Q00888 419 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 Q56UQ5 140 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 ZNF818PQ6ZRF7 136 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.01□□□□□ -0.49
SCARF1-201ENST00000263071 UHRF2Q96PU4 802 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 VSIRQ9H7M9 311 aa12.01□□□□□ -0.49
SCARF1-201ENST00000263071 TUSC2O75896 110 aa12□□□□□ -0.49
SCARF1-201ENST00000263071 ECI1P42126 302 aa12□□□□□ -0.49
SCARF1-201ENST00000263071 ODF1Q14990 250 aa12□□□□□ -0.49
SCARF1-201ENST00000263071 C12orf49Q9H741 205 aa12□□□□□ -0.49
SCARF1-201ENST00000263071 BOD1L1Q8NFC6 3051 aa12□□□□□ -0.49
SCARF1-201ENST00000263071 PPIAL4EA0A075B759 164 aa12□□□□□ -0.49
SCARF1-201ENST00000263071 PPIAL4CA0A0B4J2A2 164 aa12□□□□□ -0.49
SCARF1-201ENST00000263071 PPIAL4DF5H284 164 aa12□□□□□ -0.49
SCARF1-201ENST00000263071 IGHV3-13P01766 116 aa12□□□□□ -0.49
SCARF1-201ENST00000263071 IGHV3-7P01780 117 aa12□□□□□ -0.49
SCARF1-201ENST00000263071 PPIAL4FP0DN26 164 aa12□□□□□ -0.49
SCARF1-201ENST00000263071 PMP22Q01453 160 aa12□□□□□ -0.49
SCARF1-201ENST00000263071 TGFBR3Q03167 851 aa12□□□□□ -0.49
SCARF1-201ENST00000263071 DEFB125Q8N687 156 aa12□□□□□ -0.49
SCARF1-201ENST00000263071 ZIC4Q8N9L1 334 aa12□□□□□ -0.49
SCARF1-201ENST00000263071 AGMATQ9BSE5 352 aa12□□□□□ -0.49
SCARF1-201ENST00000263071 IGHV5-10-1A0A0J9YXX1 117 aa11.99□□□□□ -0.49
SCARF1-201ENST00000263071 FOXG1P55316 489 aaPredicted RBP11.99□□□□□ -0.49
SCARF1-201ENST00000263071 GABRA6Q16445 453 aa11.99□□□□□ -0.49
SCARF1-201ENST00000263071 PSG3Q16557 428 aa11.99□□□□□ -0.49
SCARF1-201ENST00000263071 SRSF7Q16629 238 aaKnown RBP eCLIP11.99□□□□□ -0.49
SCARF1-201ENST00000263071 FOXB1Q99853 325 aa11.99□□□□□ -0.49
SCARF1-201ENST00000263071 HINT2Q9BX68 163 aa11.99□□□□□ -0.49
SCARF1-201ENST00000263071 ERRFI1Q9UJM3 462 aaPredicted RBP11.99□□□□□ -0.49
SCARF1-201ENST00000263071 DCHS1Q96JQ0 3298 aa11.99□□□□□ -0.49
SCARF1-201ENST00000263071 ABCA1O95477 2261 aa11.99□□□□□ -0.49
SCARF1-201ENST00000263071 ZNF816-ZNF321PA0A0X1KG74 233 aa11.99□□□□□ -0.49
SCARF1-201ENST00000263071 LRP5LA4QPB2 252 aa11.99□□□□□ -0.49
SCARF1-201ENST00000263071 ZNF207O43670 478 aaKnown RBP11.99□□□□□ -0.49
SCARF1-201ENST00000263071 PDE6DO43924 150 aa11.99□□□□□ -0.49
SCARF1-201ENST00000263071 P04436 131 aa11.99□□□□□ -0.49
SCARF1-201ENST00000263071 KITLGP21583 273 aa11.99□□□□□ -0.49
SCARF1-201ENST00000263071 SSR4P51571 173 aa11.99□□□□□ -0.49
SCARF1-201ENST00000263071 ZNF808Q8N4W9 903 aaPredicted RBP11.99□□□□□ -0.49
SCARF1-201ENST00000263071 OR10V1Q8NGI7 309 aa11.99□□□□□ -0.49
SCARF1-201ENST00000263071 CHCHD2Q9Y6H1 151 aaPredicted RBP11.99□□□□□ -0.49
SCARF1-201ENST00000263071 TRAV9-2A0A087WT02 112 aa11.99□□□□□ -0.49
SCARF1-201ENST00000263071 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.99□□□□□ -0.49
SCARF1-201ENST00000263071 LINC00310P59036 64 aa11.99□□□□□ -0.49
SCARF1-201ENST00000263071 KIAA1644Q3SXP7 199 aa11.99□□□□□ -0.49
SCARF1-201ENST00000263071 CENPVQ7Z7K6 275 aaPredicted RBP11.99□□□□□ -0.49
SCARF1-201ENST00000263071 Q8N976 141 aa11.99□□□□□ -0.49
SCARF1-201ENST00000263071 USF3Q68DE3 2245 aa11.99□□□□□ -0.49
SCARF1-201ENST00000263071 PTPRZ1P23471 2315 aaPredicted RBP11.99□□□□□ -0.49
SCARF1-201ENST00000263071 MDFIC2A0A1B0GVS7 189 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 C17orf112F2Z3M2 114 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 PDCD6O75340 191 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 S1PR2O95136 353 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 EGR1P18146 543 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 SUMO3P55854 103 aaPredicted RBP11.98□□□□□ -0.49
SCARF1-201ENST00000263071 CXorf67Q86X51 503 aaPredicted RBP11.98□□□□□ -0.49
SCARF1-201ENST00000263071 OR4F17Q8NGA8 305 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 CRIM1Q9NZV1 1036 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 SS18L2Q9UHA2 77 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 NBASA2RRP1 2371 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 SIRPB1O00241 398 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 NGFP01138 241 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 PPOXP50336 477 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 FUT6P51993 359 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 HERV-K104P63124 156 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 CEACAM21Q3KPI0 293 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 SPINK14Q6IE38 97 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 CRIP3Q6Q6R5 217 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 FAM19A2Q8N3H0 131 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 ZNF439Q8NDP4 499 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 FAM234AQ9H0X4 552 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 TMEM50AO95807 157 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 LHX2P50458 406 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 MSI2Q96DH6 328 aaKnown RBP11.98□□□□□ -0.49
SCARF1-201ENST00000263071 WDR61Q9GZS3 305 aaKnown RBP11.98□□□□□ -0.49
SCARF1-201ENST00000263071 ARL2-SNX15V9GYD0 113 aa11.98□□□□□ -0.49
SCARF1-201ENST00000263071 TMEM250H0YL14 139 aa11.97□□□□□ -0.49
SCARF1-201ENST00000263071 SYNGR1O43759 233 aa11.97□□□□□ -0.49
SCARF1-201ENST00000263071 CNIH1O95406 144 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms