RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 SPINK9Q5DT21 86 aa12.56□□□□□ -0.4
XRCC1-201ENST00000262887 TXNDC17Q9BRA2 123 aa12.56□□□□□ -0.4
XRCC1-201ENST00000262887 SH2D2AQ9NP31 389 aa12.56□□□□□ -0.4
XRCC1-201ENST00000262887 SCO2A0A1W2PP80 73 aa12.55□□□□□ -0.4
XRCC1-201ENST00000262887 SNURFLB1AK76 121 aa12.55□□□□□ -0.4
XRCC1-201ENST00000262887 RHBDL1O75783 438 aa12.55□□□□□ -0.4
XRCC1-201ENST00000262887 IGLC2P0DOY2 106 aa12.55□□□□□ -0.4
XRCC1-201ENST00000262887 IGLC3P0DOY3 106 aa12.55□□□□□ -0.4
XRCC1-201ENST00000262887 TMEM204Q9BSN7 226 aa12.55□□□□□ -0.4
XRCC1-201ENST00000262887 CABIN1Q9Y6J0 2220 aa12.55□□□□□ -0.4
XRCC1-201ENST00000262887 IGHV2-70DA0A0C4DH43 119 aa12.55□□□□□ -0.4
XRCC1-201ENST00000262887 SH2D1BO14796 132 aa12.55□□□□□ -0.4
XRCC1-201ENST00000262887 LGALS4P56470 323 aa12.55□□□□□ -0.4
XRCC1-201ENST00000262887 EDDM3BP56851 147 aa12.55□□□□□ -0.4
XRCC1-201ENST00000262887 GNG3P63215 75 aa12.55□□□□□ -0.4
XRCC1-201ENST00000262887 ARF1P84077 181 aaKnown RBP12.55□□□□□ -0.4
XRCC1-201ENST00000262887 HLA-DRB5Q30154 266 aa12.55□□□□□ -0.4
XRCC1-201ENST00000262887 GNB4Q9HAV0 340 aa12.55□□□□□ -0.4
XRCC1-201ENST00000262887 NRN1Q9NPD7 142 aa12.55□□□□□ -0.4
XRCC1-201ENST00000262887 PRDM6Q9NQX0 595 aa12.55□□□□□ -0.4
XRCC1-201ENST00000262887 TNRC6AQ8NDV7 1962 aaKnown RBP12.54□□□□□ -0.4
XRCC1-201ENST00000262887 LOC102723996A0A087X1L8 192 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 A0A0G2JMM0 328 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 A0A1W2PPB8 328 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 A0A1W2PRS3 328 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 ANKRD30BLA7E2S9 258 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 KIR3DP1A8MWS1 328 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 S1PR2O95136 353 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 P0C879 139 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 RPL19P84098 196 aaKnown RBP12.54□□□□□ -0.4
XRCC1-201ENST00000262887 FBLN7Q53RD9 439 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 RPS19BP1Q86WX3 136 aaKnown RBP12.54□□□□□ -0.4
XRCC1-201ENST00000262887 Q8N7P7 452 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 IMMP1LQ96LU5 166 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 PRRG4Q9BZD6 226 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 TUBG2Q9NRH3 451 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 BDP1A6H8Y1 2624 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 IGHV5-10-1A0A0J9YXX1 117 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 AMTP48728 403 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 ZNF497Q6ZNH5 498 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 Q6ZVH6 145 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 TMPRSS7Q7RTY8 843 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 OR2D2Q9H210 308 aa12.54□□□□□ -0.4
XRCC1-201ENST00000262887 TTC28Q96AY4 2481 aa12.53□□□□□ -0.4
XRCC1-201ENST00000262887 ZDBF2Q9HCK1 2354 aa12.53□□□□□ -0.4
XRCC1-201ENST00000262887 ZNF253O75346 499 aa12.53□□□□□ -0.4
XRCC1-201ENST00000262887 MRPL33O75394 65 aaKnown RBP12.53□□□□□ -0.4
XRCC1-201ENST00000262887 FRMD6-AS1P0C7T7 363 aa12.53□□□□□ -0.4
XRCC1-201ENST00000262887 ARL14EPLP0DKL9 152 aa12.53□□□□□ -0.4
XRCC1-201ENST00000262887 COX6A1P12074 109 aa12.53□□□□□ -0.4
XRCC1-201ENST00000262887 RPEL1Q2QD12 228 aa12.53□□□□□ -0.4
XRCC1-201ENST00000262887 NRN1LQ496H8 165 aa12.53□□□□□ -0.4
XRCC1-201ENST00000262887 WIPI1Q5MNZ9 446 aaPredicted RBP12.53□□□□□ -0.4
XRCC1-201ENST00000262887 C1orf185Q5T7R7 199 aa12.53□□□□□ -0.4
XRCC1-201ENST00000262887 Q6P435 159 aa12.53□□□□□ -0.4
XRCC1-201ENST00000262887 GUSBP11Q6P575 273 aa12.53□□□□□ -0.4
XRCC1-201ENST00000262887 MCEMP1Q8IX19 187 aa12.53□□□□□ -0.4
XRCC1-201ENST00000262887 ZNF808Q8N4W9 903 aaPredicted RBP12.53□□□□□ -0.4
XRCC1-201ENST00000262887 ZNF645Q8N7E2 425 aa12.53□□□□□ -0.4
XRCC1-201ENST00000262887 TRBV9A0A0B4J1U6 114 aa12.53□□□□□ -0.4
XRCC1-201ENST00000262887 A0A1W2PQM1 296 aa12.53□□□□□ -0.4
XRCC1-201ENST00000262887 OR5B21A6NL26 309 aa12.53□□□□□ -0.4
XRCC1-201ENST00000262887 RPL30P62888 115 aaKnown RBP12.53□□□□□ -0.4
XRCC1-201ENST00000262887 MORN2Q502X0 79 aa12.53□□□□□ -0.4
XRCC1-201ENST00000262887 APH1AQ96BI3 265 aa12.53□□□□□ -0.4
XRCC1-201ENST00000262887 WDR83OSQ9Y284 106 aa12.53□□□□□ -0.4
XRCC1-201ENST00000262887 LAMA5O15230 3695 aa12.53□□□□□ -0.4
XRCC1-201ENST00000262887 K7EN84 100 aa12.52□□□□□ -0.4
XRCC1-201ENST00000262887 OR2H2O95918 312 aa12.52□□□□□ -0.4
XRCC1-201ENST00000262887 CD1BP29016 333 aa12.52□□□□□ -0.4
XRCC1-201ENST00000262887 PSG7Q13046 419 aa12.52□□□□□ -0.4
XRCC1-201ENST00000262887 UNQ5815/PRO19632Q6UWF5 114 aa12.52□□□□□ -0.4
XRCC1-201ENST00000262887 GNB1LQ9BYB4 327 aa12.52□□□□□ -0.4
XRCC1-201ENST00000262887 ZNF576Q9H609 170 aa12.52□□□□□ -0.4
XRCC1-201ENST00000262887 IGHV2OR16-5A0A0B4J2B6 119 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 GDF9O60383 454 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 P04436 131 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 CYC1P08574 325 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 RFPL3SP0C7P2 107 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 HOXC12P31275 282 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 CCL7P80098 99 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 IGFBP7Q16270 282 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 KCNS1Q96KK3 526 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 WDR54Q9H977 334 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 RNF24Q9Y225 148 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 MPC1Q9Y5U8 109 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 TRAV34A0A0B4J273 112 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 PMCHP20382 165 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 LTBRP36941 435 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 HTD2P86397 168 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 CATR1Q13166 79 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 H2BFWTQ7Z2G1 175 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 MMD2Q8IY49 270 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 KLHDC1Q8N7A1 406 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 SFXN3Q9BWM7 321 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 PKIBQ9C010 78 aa12.52□□□□□ -0.41
XRCC1-201ENST00000262887 SAA2-SAA4A0A096LPE2 208 aa12.51□□□□□ -0.41
XRCC1-201ENST00000262887 ZNF503-AS2A6NEH8 195 aa12.51□□□□□ -0.41
XRCC1-201ENST00000262887 CXorf1O96002 111 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms