RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 UNQ5815/PRO19632Q6UWF5 114 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 ZNF501Q96CX3 271 aaPredicted RBP11.06□□□□□ -0.64
TTC39A-202ENST00000262676 PPIAL4EA0A075B759 164 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 PPIAL4DF5H284 164 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 ISG15P05161 165 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 ADRA2AP08913 450 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 PPIAL4FP0DN26 164 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 RND2P52198 227 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 TMEM252Q8N6L7 170 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 CCL27Q9Y4X3 112 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 PPIAL4AQ9Y536 164 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 QSER1Q2KHR3 1735 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 ZNF318Q5VUA4 2279 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 A0A1W2PQM1 296 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 HMGA2P52926 109 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 MEGF9Q9H1U4 602 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 CISD1Q9NZ45 108 aaKnown RBP11.06□□□□□ -0.64
TTC39A-202ENST00000262676 CXorf66Q5JRM2 361 aaPredicted RBP11.06□□□□□ -0.64
TTC39A-202ENST00000262676 GPHA2Q96T91 129 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 AICDAQ9GZX7 198 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 MUC21A0A0G2JKD1 596 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 MUC21A0A140T8X8 626 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 SCTP09683 121 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 LY6EQ16553 131 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 MUC21Q5SSG8 566 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 TAF15Q92804 592 aaKnown RBP eCLIP11.06□□□□□ -0.64
TTC39A-202ENST00000262676 ZNF430Q9H8G1 570 aaPredicted RBP11.06□□□□□ -0.64
TTC39A-202ENST00000262676 YAE1D1Q9NRH1 226 aa11.06□□□□□ -0.64
TTC39A-202ENST00000262676 TMEM229AB2RXF0 380 aa11.05□□□□□ -0.64
TTC39A-202ENST00000262676 CBLN1P23435 193 aa11.05□□□□□ -0.64
TTC39A-202ENST00000262676 ATG4DQ86TL0 474 aaPredicted RBP11.05□□□□□ -0.64
TTC39A-202ENST00000262676 TTC9CQ8N5M4 171 aa11.05□□□□□ -0.64
TTC39A-202ENST00000262676 MARVELD3Q96A59 401 aa11.05□□□□□ -0.64
TTC39A-202ENST00000262676 KCNK17Q96T54 332 aa11.05□□□□□ -0.64
TTC39A-202ENST00000262676 DSPPQ9NZW4 1301 aa11.05□□□□□ -0.64
TTC39A-202ENST00000262676 RREB1Q92766 1687 aa11.05□□□□□ -0.64
TTC39A-202ENST00000262676 FOXI3A8MTJ6 420 aaPredicted RBP11.05□□□□□ -0.64
TTC39A-202ENST00000262676 THY1P04216 161 aa11.05□□□□□ -0.64
TTC39A-202ENST00000262676 KIAA0040Q15053 153 aa11.05□□□□□ -0.64
TTC39A-202ENST00000262676 STPG3Q8N7X2 389 aa11.05□□□□□ -0.64
TTC39A-202ENST00000262676 RBMY1BA6NDE4 496 aaKnown RBP11.05□□□□□ -0.64
TTC39A-202ENST00000262676 RBMY1EA6NEQ0 496 aaKnown RBP11.05□□□□□ -0.64
TTC39A-202ENST00000262676 RBMY1DP0C7P1 496 aaKnown RBP11.05□□□□□ -0.64
TTC39A-202ENST00000262676 RBMY1A1P0DJD3 496 aaKnown RBP11.05□□□□□ -0.64
TTC39A-202ENST00000262676 RBMY1CP0DJD4 496 aa11.05□□□□□ -0.64
TTC39A-202ENST00000262676 SAA1P0DJI8 122 aaPredicted RBP11.05□□□□□ -0.64
TTC39A-202ENST00000262676 FOXA3P55318 350 aaPredicted RBP11.05□□□□□ -0.64
TTC39A-202ENST00000262676 CACNA1BQ00975 2339 aa11.05□□□□□ -0.64
TTC39A-202ENST00000262676 COL5A3P25940 1745 aaPredicted RBP11.05□□□□□ -0.64
TTC39A-202ENST00000262676 S1PR2O95136 353 aa11.05□□□□□ -0.64
TTC39A-202ENST00000262676 GAPDHP04406 335 aaKnown RBP11.05□□□□□ -0.64
TTC39A-202ENST00000262676 GOLT1AQ6ZVE7 132 aa11.05□□□□□ -0.64
TTC39A-202ENST00000262676 XIRP1Q702N8 1843 aaKnown RBP11.05□□□□□ -0.64
TTC39A-202ENST00000262676 NDUFS8O00217 210 aa11.05□□□□□ -0.64
TTC39A-202ENST00000262676 KLF4O43474 513 aa11.04□□□□□ -0.64
TTC39A-202ENST00000262676 IGHV3-48P01763 117 aa11.04□□□□□ -0.64
TTC39A-202ENST00000262676 RND3P61587 244 aa11.04□□□□□ -0.64
TTC39A-202ENST00000262676 ZNF660Q6AZW8 331 aaPredicted RBP11.04□□□□□ -0.64
TTC39A-202ENST00000262676 FNDC4Q9H6D8 234 aaPredicted RBP11.04□□□□□ -0.64
TTC39A-202ENST00000262676 H0Y980 276 aa11.04□□□□□ -0.64
TTC39A-202ENST00000262676 NMBP08949 121 aa11.04□□□□□ -0.64
TTC39A-202ENST00000262676 LINC00614P0C842 121 aa11.04□□□□□ -0.64
TTC39A-202ENST00000262676 PDLIM4P50479 330 aa11.04□□□□□ -0.64
TTC39A-202ENST00000262676 MMD2Q8IY49 270 aa11.04□□□□□ -0.64
TTC39A-202ENST00000262676 C10orf111Q8N326 155 aa11.04□□□□□ -0.64
TTC39A-202ENST00000262676 CHST5Q9GZS9 411 aa11.04□□□□□ -0.64
TTC39A-202ENST00000262676 TLNRD1Q9H1K6 362 aa11.04□□□□□ -0.64
TTC39A-202ENST00000262676 IGHV3-66A0A0C4DH42 116 aa11.04□□□□□ -0.64
TTC39A-202ENST00000262676 SF3B5Q9BWJ5 86 aaKnown RBP11.04□□□□□ -0.64
TTC39A-202ENST00000262676 C2orf88Q9BSF0 95 aa11.04□□□□□ -0.64
TTC39A-202ENST00000262676 DNAJC4Q9NNZ3 241 aa11.04□□□□□ -0.64
TTC39A-202ENST00000262676 TMEM106BQ9NUM4 274 aa11.04□□□□□ -0.64
TTC39A-202ENST00000262676 LY75O60449 1722 aa11.04□□□□□ -0.64
TTC39A-202ENST00000262676 IGLV3-16A0A075B6K0 115 aa11.04□□□□□ -0.64
TTC39A-202ENST00000262676 C19orf67A6NJJ6 358 aa11.04□□□□□ -0.64
TTC39A-202ENST00000262676 CFDP00746 253 aaPredicted RBP11.04□□□□□ -0.64
TTC39A-202ENST00000262676 KLHDC2Q9Y2U9 406 aa11.04□□□□□ -0.64
TTC39A-202ENST00000262676 A0A1W2PP11 408 aa11.03□□□□□ -0.64
TTC39A-202ENST00000262676 TMEM91Q6ZNR0 172 aa11.03□□□□□ -0.64
TTC39A-202ENST00000262676 PLSCR2Q9NRY7 297 aa11.03□□□□□ -0.64
TTC39A-202ENST00000262676 IGHV1-45A0A0A0MS14 117 aa11.03□□□□□ -0.64
TTC39A-202ENST00000262676 H3BUT2 72 aa11.03□□□□□ -0.64
TTC39A-202ENST00000262676 IGHV3-23P01764 117 aa11.03□□□□□ -0.64
TTC39A-202ENST00000262676 HTN3P15516 51 aa11.03□□□□□ -0.64
TTC39A-202ENST00000262676 EGR1P18146 543 aa11.03□□□□□ -0.64
TTC39A-202ENST00000262676 SPSB4Q96A44 273 aa11.03□□□□□ -0.64
TTC39A-202ENST00000262676 SCGB3A1Q96QR1 104 aa11.03□□□□□ -0.64
TTC39A-202ENST00000262676 TRAV8-4A0A0B4J246 113 aa11.03□□□□□ -0.64
TTC39A-202ENST00000262676 HOXA5P20719 270 aa11.03□□□□□ -0.64
TTC39A-202ENST00000262676 RPL8P62917 257 aaKnown RBP11.03□□□□□ -0.64
TTC39A-202ENST00000262676 SRSF4Q08170 494 aaKnown RBP11.03□□□□□ -0.64
TTC39A-202ENST00000262676 UNC119Q13432 240 aa11.03□□□□□ -0.64
TTC39A-202ENST00000262676 FAM159AQ6UWV7 190 aa11.03□□□□□ -0.64
TTC39A-202ENST00000262676 SHISA5Q8N114 240 aa11.03□□□□□ -0.64
TTC39A-202ENST00000262676 CXorf51AA0A1B0GTR3 108 aa11.03□□□□□ -0.64
TTC39A-202ENST00000262676 APOHP02749 345 aaPredicted RBP11.03□□□□□ -0.64
TTC39A-202ENST00000262676 GLIPR1P48060 266 aa11.03□□□□□ -0.64
TTC39A-202ENST00000262676 TNFSF10P50591 281 aa11.03□□□□□ -0.64
TTC39A-202ENST00000262676 FAM106AQ4KMX7 169 aa11.03□□□□□ -0.64
TTC39A-202ENST00000262676 GPR146Q96CH1 333 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms