RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 PYY3Q5JQD4 70 aa8.36□□□□□ -1.07
CTDSPL2-201ENST00000260327 RTBDNQ9BSG5 229 aaPredicted RBP8.36□□□□□ -1.07
CTDSPL2-201ENST00000260327 NRN1Q9NPD7 142 aa8.36□□□□□ -1.07
CTDSPL2-201ENST00000260327 SCO2A0A1W2PP80 73 aa8.36□□□□□ -1.07
CTDSPL2-201ENST00000260327 DNPH1O43598 174 aa8.36□□□□□ -1.07
CTDSPL2-201ENST00000260327 IL4P05112 153 aa8.36□□□□□ -1.07
CTDSPL2-201ENST00000260327 CEACAM1P13688 526 aa8.36□□□□□ -1.07
CTDSPL2-201ENST00000260327 KLRB1Q12918 225 aa8.36□□□□□ -1.07
CTDSPL2-201ENST00000260327 ICAM4Q14773 271 aa8.36□□□□□ -1.07
CTDSPL2-201ENST00000260327 TXNDC17Q9BRA2 123 aa8.36□□□□□ -1.07
CTDSPL2-201ENST00000260327 PLXNA1Q9UIW2 1896 aa8.36□□□□□ -1.07
CTDSPL2-201ENST00000260327 WFDC3Q8IUB2 231 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 NUDT11Q96G61 164 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 IGHV5-10-1A0A0J9YXX1 117 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 MPDU1O75352 247 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 HYPMO75409 117 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 GZMHP20718 246 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 CYP2G1PQ6ZSU1 146 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 VKORC1L1Q8N0U8 176 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 OR1L8Q8NGR8 309 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 TMEM170AQ8WVE7 144 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 IL36BQ9NZH7 164 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 TMEM14DPA8MWL7 114 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 TMEM250H0YL14 139 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 SNRNP200O75643 2136 aaKnown RBP8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 AREGP15514 252 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 CTSSP25774 331 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 GFRA1P56159 465 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 CCL20P78556 96 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 LCN2P80188 198 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 SMAGPQ0VAQ4 97 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 FAM27BQ5VT28 67 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 ABHD12Q8N2K0 398 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 OR4D5Q8NGN0 318 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 ZPBPQ9BS86 351 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 JKAMPQ9P055 326 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 PATJQ8NI35 1801 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 FGF12P61328 243 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 SLC25A47Q6Q0C1 308 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 ZNF645Q8N7E2 425 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 WNT5BQ9H1J7 359 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 TMEM160Q9NX00 188 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 CLDN14O95500 239 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 AMBPP02760 352 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 ZNF735P0CB33 412 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 RPL23P62829 140 aaKnown RBP8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 TFF3Q07654 80 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 C1QL2Q7Z5L3 287 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 FAM169BQ8N8A8 192 aa8.35□□□□□ -1.07
CTDSPL2-201ENST00000260327 CGB1A6NKQ9 187 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 TMEM229AB2RXF0 380 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 H0YIZ8 118 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 VENTXO95231 258 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 IGHV3-48P01763 117 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 GCHFRP30047 84 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 RPL31P62899 125 aaKnown RBP8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 KIF26BQ2KJY2 2108 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 CT55Q8WUE5 264 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 TMEM106BQ9NUM4 274 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 MRPL16Q9NX20 251 aaKnown RBP8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 TET1Q8NFU7 2136 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 HCP5Q6MZN7 132 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 FOXD3Q9UJU5 478 aaPredicted RBP8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 PRSS2P07478 247 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 ACSF3Q4G176 576 aaPredicted RBP8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 SFTA2Q6UW10 78 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 ZDHHC16Q969W1 377 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 MARS2Q96GW9 593 aaKnown RBP8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 Q96M66 194 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 TCFL5Q9UL49 500 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 AMMECR1Q9Y4X0 333 aaPredicted RBP8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 FGF16O43320 207 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 OR2H2O95918 312 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 COX6CP09669 75 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 PRDM13Q9H4Q3 707 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 UBTD1Q9HAC8 227 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 A0A1B0GTI1 187 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 MBNL2Q5VZF2 373 aaKnown RBP8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 LINC00596Q86U02 117 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 MAP1LC3AQ9H492 121 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 WNK3Q9BYP7 1800 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 CACNA1DQ01668 2161 aa8.34□□□□□ -1.07
CTDSPL2-201ENST00000260327 TRA2AQ13595 282 aaKnown RBP eCLIP8.34□□□□□ -1.08
CTDSPL2-201ENST00000260327 ZNF501Q96CX3 271 aaPredicted RBP8.34□□□□□ -1.08
CTDSPL2-201ENST00000260327 PSME4Q14997 1843 aa8.33□□□□□ -1.08
CTDSPL2-201ENST00000260327 SCN8AQ9UQD0 1980 aa8.33□□□□□ -1.08
CTDSPL2-201ENST00000260327 MARCH11A6NNE9 402 aa8.33□□□□□ -1.08
CTDSPL2-201ENST00000260327 ZNF324BQ6AW86 544 aaPredicted RBP8.33□□□□□ -1.08
CTDSPL2-201ENST00000260327 LURAP1LQ8IV03 231 aa8.33□□□□□ -1.08
CTDSPL2-201ENST00000260327 ZNF414Q96IQ9 312 aa8.33□□□□□ -1.08
CTDSPL2-201ENST00000260327 NAA38Q9BRA0 125 aaKnown RBP8.33□□□□□ -1.08
CTDSPL2-201ENST00000260327 IGKV1D-43A0A0B4J1Z2 117 aa8.33□□□□□ -1.08
CTDSPL2-201ENST00000260327 C1QTNF9BB2RNN3 333 aa8.33□□□□□ -1.08
CTDSPL2-201ENST00000260327 C1QTNF9P0C862 333 aa8.33□□□□□ -1.08
CTDSPL2-201ENST00000260327 AMMECR1LQ6DCA0 310 aa8.33□□□□□ -1.08
CTDSPL2-201ENST00000260327 MDP1Q86V88 176 aa8.33□□□□□ -1.08
CTDSPL2-201ENST00000260327 BRCA1P38398 1863 aaKnown RBP8.33□□□□□ -1.08
CTDSPL2-201ENST00000260327 LTBP4Q8N2S1 1624 aa8.33□□□□□ -1.08
CTDSPL2-201ENST00000260327 LIPFP07098 398 aa8.33□□□□□ -1.08
CTDSPL2-201ENST00000260327 HBBP68871 147 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms