RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 OR4A16Q8NH70 328 aa22.62■■□□□ 1.21
CCM2-201ENST00000258781 QTRT1Q9BXR0 403 aaKnown RBP22.62■■□□□ 1.21
CCM2-201ENST00000258781 HELZ2Q9BYK8 2649 aaKnown RBP22.62■■□□□ 1.21
CCM2-201ENST00000258781 A0A087X0M5 115 aa22.62■■□□□ 1.21
CCM2-201ENST00000258781 A0A1B0GX30 115 aa22.62■■□□□ 1.21
CCM2-201ENST00000258781 UMAD1C9J7I0 102 aa22.62■■□□□ 1.21
CCM2-201ENST00000258781 POU2AF1Q16633 256 aa22.62■■□□□ 1.21
CCM2-201ENST00000258781 DHRS7BQ6IAN0 325 aaPredicted RBP22.62■■□□□ 1.21
CCM2-201ENST00000258781 ZNF841Q6ZN19 808 aa22.62■■□□□ 1.21
CCM2-201ENST00000258781 OR52E5Q8NH55 327 aa22.62■■□□□ 1.21
CCM2-201ENST00000258781 TMEM140Q9NV12 185 aa22.62■■□□□ 1.21
CCM2-201ENST00000258781 CT45A6P0DMU7 189 aa22.61■■□□□ 1.21
CCM2-201ENST00000258781 CT45A5P0DMU8 189 aa22.61■■□□□ 1.21
CCM2-201ENST00000258781 CT45A7P0DMV0 189 aa22.61■■□□□ 1.21
CCM2-201ENST00000258781 ARL16Q0P5N6 197 aa22.61■■□□□ 1.21
CCM2-201ENST00000258781 FAM71F2Q6NXP2 309 aa22.61■■□□□ 1.21
CCM2-201ENST00000258781 SSX9Q7RTT3 188 aa22.61■■□□□ 1.21
CCM2-201ENST00000258781 ZNF525Q8N782 197 aa22.61■■□□□ 1.21
CCM2-201ENST00000258781 OR2G3Q8NGZ4 309 aa22.61■■□□□ 1.21
CCM2-201ENST00000258781 DOCK11Q5JSL3 2073 aa22.61■■□□□ 1.21
CCM2-201ENST00000258781 CEBPZOSA8MTT3 80 aa22.6■■□□□ 1.21
CCM2-201ENST00000258781 PDLIM3Q53GG5 364 aaPredicted RBP22.6■■□□□ 1.21
CCM2-201ENST00000258781 TMEM182Q6ZP80 229 aaPredicted RBP22.6■■□□□ 1.21
CCM2-201ENST00000258781 CAMLGP49069 296 aa22.6■■□□□ 1.21
CCM2-201ENST00000258781 SPCS3P61009 180 aa22.6■■□□□ 1.21
CCM2-201ENST00000258781 RELBQ01201 579 aa22.6■■□□□ 1.21
CCM2-201ENST00000258781 RTL8BQ17RB0 113 aa22.6■■□□□ 1.21
CCM2-201ENST00000258781 BPIFCQ8NFQ6 507 aa22.6■■□□□ 1.21
CCM2-201ENST00000258781 ZDHHC16Q969W1 377 aa22.6■■□□□ 1.21
CCM2-201ENST00000258781 OR4C12Q96R67 309 aa22.6■■□□□ 1.21
CCM2-201ENST00000258781 PARD6GQ9BYG4 376 aaPredicted RBP22.6■■□□□ 1.21
CCM2-201ENST00000258781 ZNRD1Q9P1U0 126 aa22.6■■□□□ 1.21
CCM2-201ENST00000258781 J3QR06 171 aa22.59■■□□□ 1.21
CCM2-201ENST00000258781 HRASP01112 189 aa22.59■■□□□ 1.21
CCM2-201ENST00000258781 OR2B8PP59922 312 aa22.59■■□□□ 1.21
CCM2-201ENST00000258781 VKORC1L1Q8N0U8 176 aa22.59■■□□□ 1.21
CCM2-201ENST00000258781 TIMD4Q96H15 378 aa22.59■■□□□ 1.21
CCM2-201ENST00000258781 MIOXQ9UGB7 285 aa22.59■■□□□ 1.21
CCM2-201ENST00000258781 J3QKU1 62 aa22.58■■□□□ 1.21
CCM2-201ENST00000258781 PRH1P02810 166 aa22.58■■□□□ 1.21
CCM2-201ENST00000258781 IGHV1-8P0DP01 117 aa22.58■■□□□ 1.21
CCM2-201ENST00000258781 TAGLNQ01995 201 aaKnown RBP22.58■■□□□ 1.21
CCM2-201ENST00000258781 ZNF429Q86V71 674 aa22.58■■□□□ 1.21
CCM2-201ENST00000258781 LILRB2Q8N423 598 aa22.58■■□□□ 1.21
CCM2-201ENST00000258781 RAB1CQ92928 201 aa22.58■■□□□ 1.21
CCM2-201ENST00000258781 RHOVQ96L33 236 aa22.58■■□□□ 1.21
CCM2-201ENST00000258781 SLC35D1Q9NTN3 355 aa22.58■■□□□ 1.21
CCM2-201ENST00000258781 PPIHO43447 177 aaKnown RBP22.58■■□□□ 1.2
CCM2-201ENST00000258781 SCAF4O95104 1147 aaKnown RBP22.58■■□□□ 1.2
CCM2-201ENST00000258781 GOSR1O95249 250 aa22.58■■□□□ 1.2
CCM2-201ENST00000258781 IFNA17P01571 189 aa22.58■■□□□ 1.2
CCM2-201ENST00000258781 SLC38A11Q08AI6 406 aa22.58■■□□□ 1.2
CCM2-201ENST00000258781 TUSC1Q2TAM9 212 aa22.58■■□□□ 1.2
CCM2-201ENST00000258781 AVPI1Q5T686 147 aa22.58■■□□□ 1.2
CCM2-201ENST00000258781 SLC25A24Q6NUK1 477 aa22.58■■□□□ 1.2
CCM2-201ENST00000258781 LY6HO94772 140 aa22.57■■□□□ 1.2
CCM2-201ENST00000258781 OR8U8P0C7N1 319 aa22.57■■□□□ 1.2
CCM2-201ENST00000258781 COMMD1Q8N668 190 aa22.57■■□□□ 1.2
CCM2-201ENST00000258781 OR8B3Q8NGG8 313 aa22.57■■□□□ 1.2
CCM2-201ENST00000258781 OR9G1Q8NH87 305 aa22.57■■□□□ 1.2
CCM2-201ENST00000258781 SCGB1C1Q8TD33 95 aa22.57■■□□□ 1.2
CCM2-201ENST00000258781 OR8B2Q96RD0 313 aa22.57■■□□□ 1.2
CCM2-201ENST00000258781 A0A1W2PPH5 198 aa22.56■■□□□ 1.2
CCM2-201ENST00000258781 CDKN1AP38936 164 aa22.56■■□□□ 1.2
CCM2-201ENST00000258781 ZNF137PP52743 207 aa22.56■■□□□ 1.2
CCM2-201ENST00000258781 ATP6V1FQ16864 119 aa22.56■■□□□ 1.2
CCM2-201ENST00000258781 OR4A47Q6IF82 309 aa22.56■■□□□ 1.2
CCM2-201ENST00000258781 C11orf42Q8N5U0 333 aa22.56■■□□□ 1.2
CCM2-201ENST00000258781 OR10X1Q8NGY0 326 aa22.56■■□□□ 1.2
CCM2-201ENST00000258781 C8orf46Q8TAG6 207 aa22.56■■□□□ 1.2
CCM2-201ENST00000258781 TMEM186Q96B77 213 aa22.56■■□□□ 1.2
CCM2-201ENST00000258781 NEIL1Q96FI4 390 aaPredicted RBP22.56■■□□□ 1.2
CCM2-201ENST00000258781 C15orf61A6NNL5 157 aa22.56■■□□□ 1.2
CCM2-201ENST00000258781 RBP4P02753 201 aa22.56■■□□□ 1.2
CCM2-201ENST00000258781 RUNX1Q01196 453 aa22.56■■□□□ 1.2
CCM2-201ENST00000258781 CLCC1Q96S66 551 aa22.56■■□□□ 1.2
CCM2-201ENST00000258781 AIFM2Q9BRQ8 373 aa22.56■■□□□ 1.2
CCM2-201ENST00000258781 MRPL20Q9BYC9 149 aaKnown RBP22.56■■□□□ 1.2
CCM2-201ENST00000258781 NUP50Q9UKX7 468 aa22.56■■□□□ 1.2
CCM2-201ENST00000258781 APOA2P02652 100 aa22.55■■□□□ 1.2
CCM2-201ENST00000258781 ZNF616Q08AN1 781 aa22.55■■□□□ 1.2
CCM2-201ENST00000258781 LRRC75BQ2VPJ9 315 aa22.55■■□□□ 1.2
CCM2-201ENST00000258781 OR13D1Q8NGV5 346 aa22.55■■□□□ 1.2
CCM2-201ENST00000258781 TMEM133Q9H2Q1 129 aa22.55■■□□□ 1.2
CCM2-201ENST00000258781 FOXA2Q9Y261 457 aaPredicted RBP22.55■■□□□ 1.2
CCM2-201ENST00000258781 TET2Q6N021 2002 aaPredicted RBP22.55■■□□□ 1.2
CCM2-201ENST00000258781 CENPEQ02224 2701 aa22.55■■□□□ 1.2
CCM2-201ENST00000258781 TRAV3A0A0B4J244 114 aa22.54■■□□□ 1.2
CCM2-201ENST00000258781 PMS2P5A8MQ11 134 aa22.54■■□□□ 1.2
CCM2-201ENST00000258781 TSPAN15O95858 294 aa22.54■■□□□ 1.2
CCM2-201ENST00000258781 ARG1P05089 322 aa22.54■■□□□ 1.2
CCM2-201ENST00000258781 TLE4Q04727 773 aa22.54■■□□□ 1.2
CCM2-201ENST00000258781 SP5Q6BEB4 398 aaPredicted RBP22.54■■□□□ 1.2
CCM2-201ENST00000258781 OR8G2PQ6IF36 304 aa22.54■■□□□ 1.2
CCM2-201ENST00000258781 DOPEY2Q9Y3R5 2298 aa22.54■■□□□ 1.2
CCM2-201ENST00000258781 RFNGQ9Y644 331 aa22.54■■□□□ 1.2
CCM2-201ENST00000258781 FHITP49789 147 aa22.54■■□□□ 1.2
CCM2-201ENST00000258781 SPINK9Q5DT21 86 aa22.54■■□□□ 1.2
CCM2-201ENST00000258781 THNSL2Q86YJ6 484 aa22.54■■□□□ 1.2
CCM2-201ENST00000258781 OR5AN1Q8NGI8 311 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 250.4 ms