RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ZNF519Q8TB69 540 aa5.8□□□□□ -1.48
PDGFRA-201ENST00000257290 NINQ8N4C6 2090 aa5.8□□□□□ -1.48
PDGFRA-201ENST00000257290 MYO10Q9HD67 2058 aa5.8□□□□□ -1.48
PDGFRA-201ENST00000257290 LAMTOR5O43504 91 aa5.8□□□□□ -1.48
PDGFRA-201ENST00000257290 PTGER1P34995 402 aa5.8□□□□□ -1.48
PDGFRA-201ENST00000257290 ERVK11-1P61568 191 aa5.8□□□□□ -1.48
PDGFRA-201ENST00000257290 FAM159AQ6UWV7 190 aa5.8□□□□□ -1.48
PDGFRA-201ENST00000257290 BCL6BQ8N143 479 aaPredicted RBP5.8□□□□□ -1.48
PDGFRA-201ENST00000257290 PLA2G3Q9NZ20 509 aa5.8□□□□□ -1.48
PDGFRA-201ENST00000257290 PSME4Q14997 1843 aa5.8□□□□□ -1.48
PDGFRA-201ENST00000257290 KIF13BQ9NQT8 1826 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 VDAC2P45880 294 aaPredicted RBP5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 MST1LQ2TV78 715 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 ADAMTSL4Q6UY14 1074 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 OR13A1Q8NGR1 328 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 ARPC1AQ92747 370 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 PRR13Q9NZ81 148 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 FBXL7Q9UJT9 491 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 TNFSF14O43557 240 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 PSMB5P28074 263 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 PSG4Q00888 419 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 RIGQ13278 110 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 BRK1Q8WUW1 75 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 ZNF414Q96IQ9 312 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 LINC00615Q96LM1 132 aaPredicted RBP5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 GNB1LQ9BYB4 327 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 CYTL1Q9NRR1 136 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 TWIST1Q15672 202 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 LIAT1Q6ZQX7 453 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 SLC52A3Q9NQ40 469 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 TMEM213A2RRL7 107 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 SSUH2Q9Y2M2 353 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 TRAV8-6A0A0B4J262 113 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 C11orf98E9PRG8 122 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 PGFP49763 221 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 TCF23Q7RTU1 214 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 SARAFQ96BY9 339 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 NEURL3Q96EH8 262 aa5.79□□□□□ -1.48
PDGFRA-201ENST00000257290 PRKNO60260 465 aaPredicted RBP5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 ZNF708P17019 499 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 NDUFV3P56181 108 aaKnown RBP5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 Q0VG73 95 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 ZNF56Q15929 161 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 SPATA46Q5T0L3 261 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 TSPO2Q5TGU0 170 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 TSACCQ96A04 125 aaPredicted RBP5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 TAAR6Q96RI8 345 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 TNFRSF13CQ96RJ3 184 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 S1PR3Q99500 378 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 GNB4Q9HAV0 340 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 TMEM167BQ9NRX6 74 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 GPR75O95800 540 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 C1QAP02745 245 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 WFDC5Q8TCV5 224 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 TMEM255BQ8WV15 326 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 FLYWCH2Q96CP2 140 aaKnown RBP5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 ABHD14BQ96IU4 210 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 AAMDCQ9H7C9 122 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 TINCRA0A1B0GVN0 87 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 SH2D7A6NKC9 451 aaPredicted RBP5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 ZNF732B4DXR9 585 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 GGTLC3B5MD39 225 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 DLX1P56177 255 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 LCN12Q6JVE5 192 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 C19orf25Q9UFG5 118 aaPredicted RBP5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 C9JQL5 133 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 VPREB1P12018 145 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 CFHR2P36980 270 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 DEFB119Q8N690 84 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 TMEM252Q8N6L7 170 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 SLC25A2Q9BXI2 301 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 ZNF576Q9H609 170 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 A0A1W2PPI3 338 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 KIR2DS2P43631 304 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 SRYQ05066 204 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 TDRG1Q3Y452 100 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 HOGA1Q86XE5 327 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 TDHQ8IZJ6 230 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 TMEM178AQ8NBL3 297 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 MYOZ3Q8TDC0 251 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 NRGNQ92686 78 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 SLC25A38Q96DW6 304 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 SIRPDQ9H106 197 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 WFDC1Q9HC57 220 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 SIGLEC8Q9NYZ4 499 aa5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 ZNF443Q9Y2A4 671 aaPredicted RBP5.78□□□□□ -1.48
PDGFRA-201ENST00000257290 TRBV6-7A0A0A0MS04 114 aa5.77□□□□□ -1.48
PDGFRA-201ENST00000257290 PRSS38A1L453 326 aa5.77□□□□□ -1.48
PDGFRA-201ENST00000257290 H7C2G1 150 aa5.77□□□□□ -1.48
PDGFRA-201ENST00000257290 K7N7A8 449 aa5.77□□□□□ -1.48
PDGFRA-201ENST00000257290 NDUFB8O95169 186 aa5.77□□□□□ -1.48
PDGFRA-201ENST00000257290 C1orf105O95561 183 aa5.77□□□□□ -1.48
PDGFRA-201ENST00000257290 OPRK1P41145 380 aa5.77□□□□□ -1.48
PDGFRA-201ENST00000257290 GNB2P62879 340 aa5.77□□□□□ -1.48
PDGFRA-201ENST00000257290 RFLNAQ6ZTI6 216 aa5.77□□□□□ -1.48
PDGFRA-201ENST00000257290 CDRT4Q8N9R6 151 aa5.77□□□□□ -1.48
PDGFRA-201ENST00000257290 OR1L1Q8NH94 360 aa5.77□□□□□ -1.48
PDGFRA-201ENST00000257290 C10orf35Q96D05 121 aa5.77□□□□□ -1.48
PDGFRA-201ENST00000257290 RNF126Q9BV68 326 aa5.77□□□□□ -1.48
PDGFRA-201ENST00000257290 hDV102S1A0JD36 115 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms