RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 BATF2Q8N1L9 274 aa17.17■□□□□ 0.34
RARA-201ENST00000254066 Q8N7P7 452 aa17.17■□□□□ 0.34
RARA-201ENST00000254066 MTCH1Q9NZJ7 389 aa17.17■□□□□ 0.34
RARA-201ENST00000254066 DNPH1O43598 174 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 DKK1O94907 266 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 CXorf1O96002 111 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 IGLV3-19P01714 112 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 ZNF83P51522 516 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 MLF1P58340 268 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 MUC15Q8N387 334 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 OR4P4Q8NGL7 312 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 LMX1AQ8TE12 382 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 C11orf52Q96A22 123 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 UCN2Q96RP3 112 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 HSPB6O14558 160 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 OR10J4P0C629 311 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 SRD5A2P31213 254 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 LRRC10Q5BKY1 277 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 COLCA1Q6ZS62 124 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 NIT1Q86X76 327 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 PLXDC1Q8IUK5 500 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 ZBTB34Q8NCN2 500 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 BORCS7Q96B45 105 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 UHRF2Q96PU4 802 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 HS3ST6Q96QI5 342 aa17.16■□□□□ 0.34
RARA-201ENST00000254066 IGHV3-15A0A0B4J1V0 119 aa17.15■□□□□ 0.34
RARA-201ENST00000254066 A0A1W2PPC4 97 aa17.15■□□□□ 0.34
RARA-201ENST00000254066 STAG3L2P0CL84 134 aa17.15■□□□□ 0.34
RARA-201ENST00000254066 OR2M7Q8NG81 312 aa17.15■□□□□ 0.34
RARA-201ENST00000254066 OR1A1Q9P1Q5 309 aa17.15■□□□□ 0.34
RARA-201ENST00000254066 RBM7Q9Y580 266 aaKnown RBP17.15■□□□□ 0.34
RARA-201ENST00000254066 CX3CL1P78423 397 aa17.15■□□□□ 0.34
RARA-201ENST00000254066 ODF1Q14990 250 aa17.15■□□□□ 0.34
RARA-201ENST00000254066 C1orf210Q8IVY1 113 aa17.15■□□□□ 0.34
RARA-201ENST00000254066 NAT8BQ9UHF3 227 aa17.15■□□□□ 0.34
RARA-201ENST00000254066 PIEZO1Q92508 2521 aa17.14■□□□□ 0.33
RARA-201ENST00000254066 TRGV10A0A0A0MS01 117 aa17.14■□□□□ 0.33
RARA-201ENST00000254066 OR5B21A6NL26 309 aa17.14■□□□□ 0.33
RARA-201ENST00000254066 THBS3P49746 956 aa17.14■□□□□ 0.33
RARA-201ENST00000254066 CLN8Q9UBY8 286 aa17.14■□□□□ 0.33
RARA-201ENST00000254066 TRAV9-2A0A087WT02 112 aa17.13■□□□□ 0.33
RARA-201ENST00000254066 SCO2A0A1W2PP80 73 aa17.13■□□□□ 0.33
RARA-201ENST00000254066 A0A1W2PR80 420 aa17.13■□□□□ 0.33
RARA-201ENST00000254066 RAET1LQ5VY80 246 aa17.13■□□□□ 0.33
RARA-201ENST00000254066 V9GYV3 84 aa17.13■□□□□ 0.33
RARA-201ENST00000254066 PCDH15Q96QU1 1955 aa17.13■□□□□ 0.33
RARA-201ENST00000254066 K7EN84 100 aa17.13■□□□□ 0.33
RARA-201ENST00000254066 SLC17A3O00476 420 aa17.13■□□□□ 0.33
RARA-201ENST00000254066 GFRA3O60609 400 aa17.13■□□□□ 0.33
RARA-201ENST00000254066 CA2P00918 260 aa17.13■□□□□ 0.33
RARA-201ENST00000254066 HLA-DQA1P01909 254 aa17.13■□□□□ 0.33
RARA-201ENST00000254066 PSG7Q13046 419 aa17.13■□□□□ 0.33
RARA-201ENST00000254066 OCIAD2Q56VL3 154 aa17.13■□□□□ 0.33
RARA-201ENST00000254066 TMEM136Q6ZRR5 245 aa17.13■□□□□ 0.33
RARA-201ENST00000254066 DRAM1Q8N682 238 aa17.13■□□□□ 0.33
RARA-201ENST00000254066 OR4F17Q8NGA8 305 aa17.13■□□□□ 0.33
RARA-201ENST00000254066 LOXL4Q96JB6 756 aa17.13■□□□□ 0.33
RARA-201ENST00000254066 IL36RNQ9UBH0 155 aa17.13■□□□□ 0.33
RARA-201ENST00000254066 KCNS2Q9ULS6 477 aa17.13■□□□□ 0.33
RARA-201ENST00000254066 A0A1W2PRS3 328 aa17.12■□□□□ 0.33
RARA-201ENST00000254066 PMCHP20382 165 aa17.12■□□□□ 0.33
RARA-201ENST00000254066 MC5RP33032 325 aa17.12■□□□□ 0.33
RARA-201ENST00000254066 OPRK1P41145 380 aa17.12■□□□□ 0.33
RARA-201ENST00000254066 GPM6AP51674 278 aa17.12■□□□□ 0.33
RARA-201ENST00000254066 GFRA1P56159 465 aa17.12■□□□□ 0.33
RARA-201ENST00000254066 ZNF718Q3SXZ3 478 aa17.12■□□□□ 0.33
RARA-201ENST00000254066 ST6GALNAC3Q8NDV1 305 aa17.12■□□□□ 0.33
RARA-201ENST00000254066 IL1F10Q8WWZ1 152 aa17.12■□□□□ 0.33
RARA-201ENST00000254066 FOXB1Q99853 325 aa17.12■□□□□ 0.33
RARA-201ENST00000254066 FGF23Q9GZV9 251 aaPredicted RBP17.12■□□□□ 0.33
RARA-201ENST00000254066 CST9LQ9H4G1 147 aa17.12■□□□□ 0.33
RARA-201ENST00000254066 CHCHD2Q9Y6H1 151 aaPredicted RBP17.12■□□□□ 0.33
RARA-201ENST00000254066 TRAV38-1A0A0B4J264 116 aa17.12■□□□□ 0.33
RARA-201ENST00000254066 TRAV24A0A0B4J272 114 aa17.12■□□□□ 0.33
RARA-201ENST00000254066 TRAV34A0A0B4J273 112 aa17.12■□□□□ 0.33
RARA-201ENST00000254066 EAF1Q96JC9 268 aaPredicted RBP17.12■□□□□ 0.33
RARA-201ENST00000254066 FGF21Q9NSA1 209 aa17.12■□□□□ 0.33
RARA-201ENST00000254066 ODAMA1E959 279 aa17.11■□□□□ 0.33
RARA-201ENST00000254066 WISP2O76076 250 aa17.11■□□□□ 0.33
RARA-201ENST00000254066 B4GALT1P15291 398 aa17.11■□□□□ 0.33
RARA-201ENST00000254066 GABRA2P47869 451 aa17.11■□□□□ 0.33
RARA-201ENST00000254066 VAMP3Q15836 100 aa17.11■□□□□ 0.33
RARA-201ENST00000254066 VASH2Q86V25 355 aa17.11■□□□□ 0.33
RARA-201ENST00000254066 ABHD3Q8WU67 409 aa17.11■□□□□ 0.33
RARA-201ENST00000254066 DLL3Q9NYJ7 618 aa17.11■□□□□ 0.33
RARA-201ENST00000254066 SEC16AO15027 2179 aa17.11■□□□□ 0.33
RARA-201ENST00000254066 RAB29O14966 203 aa17.11■□□□□ 0.33
RARA-201ENST00000254066 LAMTOR5O43504 91 aa17.11■□□□□ 0.33
RARA-201ENST00000254066 ZG16O60844 167 aa17.11■□□□□ 0.33
RARA-201ENST00000254066 DSCR4P56555 118 aaPredicted RBP17.11■□□□□ 0.33
RARA-201ENST00000254066 WNT10AQ9GZT5 417 aa17.11■□□□□ 0.33
RARA-201ENST00000254066 CACNA1HO95180 2353 aa17.11■□□□□ 0.33
RARA-201ENST00000254066 FER1L5A0AVI2 2057 aa17.11■□□□□ 0.33
RARA-201ENST00000254066 IGHV1OR21-1A0A087WYE8 117 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 GJE1A6NN92 205 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 GDF9O60383 454 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 CYC1P08574 325 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 PATE4P0C8F1 98 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 ARL14EPLP0DKL9 152 aa17.1■□□□□ 0.33
RARA-201ENST00000254066 ARG2P78540 354 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms