RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ZNF709Q8N972 641 aa16.13■□□□□ 0.17
CDC42EP1-201ENST00000249014 CT45A3Q8NHU0 189 aa16.13■□□□□ 0.17
CDC42EP1-201ENST00000249014 S1PR3Q99500 378 aa16.13■□□□□ 0.17
CDC42EP1-201ENST00000249014 ACTR3CQ9C0K3 210 aaPredicted RBP16.13■□□□□ 0.17
CDC42EP1-201ENST00000249014 ATMQ13315 3056 aa16.12■□□□□ 0.17
CDC42EP1-201ENST00000249014 CYB5BO43169 146 aa16.12■□□□□ 0.17
CDC42EP1-201ENST00000249014 S100A8P05109 93 aa16.12■□□□□ 0.17
CDC42EP1-201ENST00000249014 SPCS3P61009 180 aa16.12■□□□□ 0.17
CDC42EP1-201ENST00000249014 TNFAIP6P98066 277 aaPredicted RBP16.12■□□□□ 0.17
CDC42EP1-201ENST00000249014 KIAA0141Q14154 515 aaPredicted RBP16.12■□□□□ 0.17
CDC42EP1-201ENST00000249014 ZNF674Q2M3X9 581 aa16.12■□□□□ 0.17
CDC42EP1-201ENST00000249014 SLC16A13Q7RTY0 426 aa16.12■□□□□ 0.17
CDC42EP1-201ENST00000249014 TGIF2LYQ8IUE0 185 aa16.12■□□□□ 0.17
CDC42EP1-201ENST00000249014 FAM57AQ8TBR7 257 aa16.12■□□□□ 0.17
CDC42EP1-201ENST00000249014 SSX3Q99909 188 aa16.12■□□□□ 0.17
CDC42EP1-201ENST00000249014 RNF7Q9UBF6 113 aa16.12■□□□□ 0.17
CDC42EP1-201ENST00000249014 BSNQ9UPA5 3926 aa16.12■□□□□ 0.17
CDC42EP1-201ENST00000249014 SMG1Q96Q15 3661 aaKnown RBP16.12■□□□□ 0.17
CDC42EP1-201ENST00000249014 CD1BP29016 333 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 NUBP1P53384 320 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 STUMQ69YW2 141 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 TCF23Q7RTU1 214 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 DEFB108BQ8NET1 73 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 TMEM140Q9NV12 185 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 TMEM242Q9NWH2 141 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 GFOD1Q9NXC2 390 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 WDR83OSQ9Y284 106 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 DYSFO75923 2080 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 CUL9Q8IWT3 2517 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 KBTBD11-OT1A0A1B0GTJ5 212 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 RRHO14718 337 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 CD40P25942 277 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 CCKARP32238 428 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 VDAC2P45880 294 aaPredicted RBP16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 PSMB3P49720 205 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 RND2P52198 227 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 ERVK-16P61578 105 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 NCMAPQ5T1S8 102 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 SDSLQ96GA7 329 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 SMIM7Q9BQ49 75 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 IL19Q9UHD0 177 aa16.11■□□□□ 0.17
CDC42EP1-201ENST00000249014 ZFHX2Q9C0A1 2572 aaPredicted RBP16.1■□□□□ 0.17
CDC42EP1-201ENST00000249014 SAA2-SAA4A0A096LPE2 208 aa16.1■□□□□ 0.17
CDC42EP1-201ENST00000249014 IFNA10P01566 189 aa16.1■□□□□ 0.17
CDC42EP1-201ENST00000249014 SAA2P0DJI9 122 aaPredicted RBP16.1■□□□□ 0.17
CDC42EP1-201ENST00000249014 GCSAMLQ5JQS6 135 aa16.1■□□□□ 0.17
CDC42EP1-201ENST00000249014 PRSS33Q8NF86 280 aa16.1■□□□□ 0.17
CDC42EP1-201ENST00000249014 OR52E5Q8NH55 327 aa16.1■□□□□ 0.17
CDC42EP1-201ENST00000249014 NCOR1P1Q9H4R4 102 aa16.1■□□□□ 0.17
CDC42EP1-201ENST00000249014 C17orf112F2Z3M2 114 aa16.1■□□□□ 0.17
CDC42EP1-201ENST00000249014 CLDN34H7C241 214 aa16.1■□□□□ 0.17
CDC42EP1-201ENST00000249014 SMIM6P0DI80 62 aa16.1■□□□□ 0.17
CDC42EP1-201ENST00000249014 PDLIM3Q53GG5 364 aaPredicted RBP16.1■□□□□ 0.17
CDC42EP1-201ENST00000249014 NANPQ8TBE9 248 aa16.1■□□□□ 0.17
CDC42EP1-201ENST00000249014 TMEM170AQ8WVE7 144 aa16.1■□□□□ 0.17
CDC42EP1-201ENST00000249014 GAFA1Q96PS6 74 aa16.1■□□□□ 0.17
CDC42EP1-201ENST00000249014 ZNF251Q9BRH9 671 aa16.1■□□□□ 0.17
CDC42EP1-201ENST00000249014 DCAF16Q9NXF7 216 aa16.1■□□□□ 0.17
CDC42EP1-201ENST00000249014 GAB2Q9UQC2 676 aa16.1■□□□□ 0.17
CDC42EP1-201ENST00000249014 CEP250Q9BV73 2442 aa16.09■□□□□ 0.17
CDC42EP1-201ENST00000249014 PRSS46E5RG02 174 aa16.09■□□□□ 0.17
CDC42EP1-201ENST00000249014 ITGB1BP1O14713 200 aa16.09■□□□□ 0.17
CDC42EP1-201ENST00000249014 GFRA3O60609 400 aa16.09■□□□□ 0.17
CDC42EP1-201ENST00000249014 CLN5O75503 358 aa16.09■□□□□ 0.17
CDC42EP1-201ENST00000249014 RAB7AP51149 207 aa16.09■□□□□ 0.17
CDC42EP1-201ENST00000249014 ABHD12Q8N2K0 398 aa16.09■□□□□ 0.17
CDC42EP1-201ENST00000249014 RPUSD4Q96CM3 377 aaKnown RBP16.09■□□□□ 0.17
CDC42EP1-201ENST00000249014 CCL13Q99616 98 aa16.09■□□□□ 0.17
CDC42EP1-201ENST00000249014 HEYLQ9NQ87 328 aaPredicted RBP16.09■□□□□ 0.17
CDC42EP1-201ENST00000249014 NAT8Q9UHE5 227 aa16.09■□□□□ 0.17
CDC42EP1-201ENST00000249014 YLPM1P49750 1951 aaKnown RBP16.09■□□□□ 0.17
CDC42EP1-201ENST00000249014 KBTBD11O94819 623 aa16.09■□□□□ 0.17
CDC42EP1-201ENST00000249014 SELENOVP59797 346 aa16.09■□□□□ 0.17
CDC42EP1-201ENST00000249014 KRTCAP3Q53RY4 240 aa16.09■□□□□ 0.17
CDC42EP1-201ENST00000249014 CYP2G1PQ6ZSU1 146 aa16.09■□□□□ 0.17
CDC42EP1-201ENST00000249014 FAM216BQ8N7L0 139 aa16.09■□□□□ 0.17
CDC42EP1-201ENST00000249014 DIRC2Q96SL1 478 aa16.09■□□□□ 0.17
CDC42EP1-201ENST00000249014 MANBALQ9NQG1 85 aa16.09■□□□□ 0.17
CDC42EP1-201ENST00000249014 GYPAP02724 150 aa16.08■□□□□ 0.16
CDC42EP1-201ENST00000249014 TRGC2P03986 189 aa16.08■□□□□ 0.16
CDC42EP1-201ENST00000249014 KIR2DS2P43631 304 aa16.08■□□□□ 0.16
CDC42EP1-201ENST00000249014 CDC34P49427 236 aaPredicted RBP16.08■□□□□ 0.16
CDC42EP1-201ENST00000249014 OR4F5Q8NH21 305 aa16.08■□□□□ 0.16
CDC42EP1-201ENST00000249014 OR4S2Q8NH73 311 aa16.08■□□□□ 0.16
CDC42EP1-201ENST00000249014 SNRNP40Q96DI7 357 aaKnown RBP16.08■□□□□ 0.16
CDC42EP1-201ENST00000249014 OR4F4Q96R69 305 aa16.08■□□□□ 0.16
CDC42EP1-201ENST00000249014 PARLQ9H300 379 aa16.08■□□□□ 0.16
CDC42EP1-201ENST00000249014 ANKRD11Q6UB99 2663 aaPredicted RBP16.08■□□□□ 0.16
CDC42EP1-201ENST00000249014 TRGV10A0A0A0MS01 117 aa16.07■□□□□ 0.16
CDC42EP1-201ENST00000249014 SMCO3A2RU48 225 aa16.07■□□□□ 0.16
CDC42EP1-201ENST00000249014 TMEM250H0YL14 139 aa16.07■□□□□ 0.16
CDC42EP1-201ENST00000249014 PAGE4O60829 102 aa16.07■□□□□ 0.16
CDC42EP1-201ENST00000249014 MMP23AO75900 390 aa16.07■□□□□ 0.16
CDC42EP1-201ENST00000249014 YIF1AO95070 293 aa16.07■□□□□ 0.16
CDC42EP1-201ENST00000249014 ADIRFQ15847 76 aa16.07■□□□□ 0.16
CDC42EP1-201ENST00000249014 TMEM241Q24JQ0 296 aa16.07■□□□□ 0.16
CDC42EP1-201ENST00000249014 ACOT6Q3I5F7 207 aaPredicted RBP16.07■□□□□ 0.16
CDC42EP1-201ENST00000249014 TREML4Q6UXN2 200 aa16.07■□□□□ 0.16
CDC42EP1-201ENST00000249014 ZNF439Q8NDP4 499 aa16.07■□□□□ 0.16
CDC42EP1-201ENST00000249014 FAM210BQ96KR6 192 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms