RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 ZNF703Q9H7S9 590 aaPredicted RBP7.88□□□□□ -1.15
COL21A1-201ENST00000244728 IL36RNQ9UBH0 155 aa7.88□□□□□ -1.15
COL21A1-201ENST00000244728 TLN1Q9Y490 2541 aaKnown RBP7.88□□□□□ -1.15
COL21A1-201ENST00000244728 CBY3A6NI87 242 aa7.88□□□□□ -1.15
COL21A1-201ENST00000244728 HBZP02008 142 aa7.88□□□□□ -1.15
COL21A1-201ENST00000244728 TAS2R45P59539 299 aa7.88□□□□□ -1.15
COL21A1-201ENST00000244728 P2RY6Q15077 328 aa7.88□□□□□ -1.15
COL21A1-201ENST00000244728 HLA-DRB5Q30154 266 aa7.88□□□□□ -1.15
COL21A1-201ENST00000244728 PSMG3Q9BT73 122 aaPredicted RBP7.88□□□□□ -1.15
COL21A1-201ENST00000244728 WDR61Q9GZS3 305 aaKnown RBP7.88□□□□□ -1.15
COL21A1-201ENST00000244728 ARL2-SNX15V9GYD0 113 aa7.88□□□□□ -1.15
COL21A1-201ENST00000244728 BLNKQ8WV28 456 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 CORO2AQ92828 525 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 C1orf147Q96MC9 270 aaPredicted RBP7.87□□□□□ -1.15
COL21A1-201ENST00000244728 TMEM56Q96MV1 263 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 GUCD1Q96NT3 240 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 TNFRSF19Q9NS68 423 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 WIPI2Q9Y4P8 454 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 TMEM56-RWDD3S4R434 201 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 PINLYPA6NC86 204 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 RHOBP62745 196 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 SLC35B1P78383 322 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 FAM27E3Q08E93 113 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 HERPUD1Q15011 391 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 ZNF441Q8N8Z8 693 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 SLC24A4Q8NFF2 622 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 OR4C5Q8NGB2 326 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 TMEM54Q969K7 222 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 RALYQ9UKM9 306 aaKnown RBP7.87□□□□□ -1.15
COL21A1-201ENST00000244728 TMEM250H0YL14 139 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 AMBPP02760 352 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 CD82P27701 267 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 ID3Q02535 119 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 MRPL54Q6P161 138 aaKnown RBP7.87□□□□□ -1.15
COL21A1-201ENST00000244728 C5orf24Q7Z6I8 188 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 TCTEX1D1Q8N7M0 179 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 OR5R1Q8NH85 324 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 HSD17B10Q99714 261 aaKnown RBP7.87□□□□□ -1.15
COL21A1-201ENST00000244728 GAL3ST2Q9H3Q3 398 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 VSIRQ9H7M9 311 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 IGKV1-12A0A0C4DH73 117 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 FAM90A10PA6NDY2 464 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 FAM90A18PA6NE21 464 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 FAM90A16PA6NEW6 464 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 FAM90A20PA6NIJ5 464 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 FAM90A8PA6NJQ4 464 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 FAM90A7PA6NKC0 464 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 FAM90A22PA8MWA6 464 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 FAM90A12PA8MX19 464 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 FAM90A5PA8MXJ8 464 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 FAM90A23PA8MXZ1 464 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 DIRC3C9JPN6 131 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 IGKV1D-12P01611 117 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 CELA3BP08861 270 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 FAM90A15PP0C7V4 464 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 FAM90A13PP0C7W8 464 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 FAM90A14PP0C7W9 464 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 FAM90A24PP0C7X0 464 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 TNXAQ16473 311 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 ZNRF1Q8ND25 227 aa7.87□□□□□ -1.15
COL21A1-201ENST00000244728 ANKHD1Q8IWZ3 2542 aaKnown RBP7.86□□□□□ -1.15
COL21A1-201ENST00000244728 MALRD1Q5VYJ5 2156 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 hCG_38984A0A1B0GV85 526 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 AHRRA9YTQ3 701 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 ADH4P08319 380 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 RPL23P62829 140 aaKnown RBP7.86□□□□□ -1.15
COL21A1-201ENST00000244728 OR4S2Q8NH73 311 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 CYYR1Q96J86 154 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 PLSCR2Q9NRY7 297 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 DENND4AQ7Z401 1863 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 A0A1B0GW64 132 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 SYNGR3O43761 229 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 TNFRSF9Q07011 255 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 ZFP36L1Q07352 338 aaKnown RBP7.86□□□□□ -1.15
COL21A1-201ENST00000244728 COL5A1-AS1Q5SY13 56 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 ETFRF1Q6IPR1 90 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 RNASEKQ6P5S7 137 aaKnown RBP7.86□□□□□ -1.15
COL21A1-201ENST00000244728 S100A7AQ86SG5 101 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 C11orf42Q8N5U0 333 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 ZNF525Q8N782 197 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 OR4P4Q8NGL7 312 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 FGFBP3Q8TAT2 258 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 ZG16O60844 167 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 FAM87AP0C7U9 286 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 MPV17P39210 176 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 RAB7AP51149 207 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 LRRC75BQ2VPJ9 315 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 C17orf82Q86X59 251 aaPredicted RBP7.86□□□□□ -1.15
COL21A1-201ENST00000244728 GTF3AQ92664 365 aaKnown RBP7.86□□□□□ -1.15
COL21A1-201ENST00000244728 HARBI1Q96MB7 349 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 MS4A5Q9H3V2 200 aa7.86□□□□□ -1.15
COL21A1-201ENST00000244728 PNRC2Q9NPJ4 139 aaKnown RBP7.86□□□□□ -1.15
COL21A1-201ENST00000244728 E9PLN8 166 aa7.85□□□□□ -1.15
COL21A1-201ENST00000244728 CD1BP29016 333 aa7.85□□□□□ -1.15
COL21A1-201ENST00000244728 TNFSF10P50591 281 aa7.85□□□□□ -1.15
COL21A1-201ENST00000244728 SPSB3Q6PJ21 355 aa7.85□□□□□ -1.15
COL21A1-201ENST00000244728 TGIF2LYQ8IUE0 185 aa7.85□□□□□ -1.15
COL21A1-201ENST00000244728 ZCCHC24Q8N2G6 241 aaKnown RBP7.85□□□□□ -1.15
COL21A1-201ENST00000244728 FREM1Q5H8C1 2179 aa7.85□□□□□ -1.15
COL21A1-201ENST00000244728 TRBV24-1A0A075B6N3 115 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms