RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 A0A1W2PRF3 423 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 A0A1W2PRM7 423 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 C17orf98A8MV24 154 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 GPR137BO60478 399 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 IGKV1-39P01597 117 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 IGKV1D-39P04432 117 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 CRYBA1P05813 215 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 IGHV1-8P0DP01 117 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 REG1BP48304 166 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 PDLIM4P50479 330 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 AKR1D1P51857 326 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 RNF212Q495C1 297 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 ZNF585BQ52M93 769 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 NCR3LG1Q68D85 454 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 ZNF645Q8N7E2 425 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 ABHD14AQ9BUJ0 271 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 TEX15Q9BXT5 2789 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 SAA2-SAA4A0A096LPE2 208 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 TSPAN15O95858 294 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 SAA2P0DJI9 122 aaPredicted RBP10.54□□□□□ -0.72
HIF3A-201ENST00000244302 SPP1P10451 314 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 COX7A1P24310 79 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 F2RP25116 425 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 RPL35P42766 123 aaKnown RBP10.54□□□□□ -0.72
HIF3A-201ENST00000244302 KLRD1Q13241 179 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 CMTM1Q8IZ96 169 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 PNKDQ8N490 385 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 LY6G5BQ8NDX9 201 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 ZNF251Q9BRH9 671 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 GINS3Q9BRX5 216 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 GAL3ST2Q9H3Q3 398 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 TUBA4BQ9H853 241 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 CACFD1Q9UGQ2 172 aa10.54□□□□□ -0.72
HIF3A-201ENST00000244302 LSM5Q9Y4Y9 91 aaKnown RBP10.54□□□□□ -0.72
HIF3A-201ENST00000244302 A0A0G2JRQ6 117 aa10.53□□□□□ -0.72
HIF3A-201ENST00000244302 COLCA2A8K830 154 aa10.53□□□□□ -0.72
HIF3A-201ENST00000244302 GPR12P47775 334 aa10.53□□□□□ -0.72
HIF3A-201ENST00000244302 P2RY1P47900 373 aa10.53□□□□□ -0.72
HIF3A-201ENST00000244302 LDLRAD2Q5SZI1 272 aa10.53□□□□□ -0.72
HIF3A-201ENST00000244302 LIAT1Q6ZQX7 453 aa10.53□□□□□ -0.72
HIF3A-201ENST00000244302 CCDC71LQ8N9Z2 235 aa10.53□□□□□ -0.72
HIF3A-201ENST00000244302 C12orf57Q99622 126 aa10.53□□□□□ -0.72
HIF3A-201ENST00000244302 VWC2LB2RUY7 222 aa10.52□□□□□ -0.72
HIF3A-201ENST00000244302 M0R1X1 148 aa10.52□□□□□ -0.72
HIF3A-201ENST00000244302 SCGB1D2O95969 90 aa10.52□□□□□ -0.72
HIF3A-201ENST00000244302 SNCAP37840 140 aa10.52□□□□□ -0.72
HIF3A-201ENST00000244302 RND3P61587 244 aa10.52□□□□□ -0.72
HIF3A-201ENST00000244302 SRPXP78539 464 aa10.52□□□□□ -0.72
HIF3A-201ENST00000244302 ZNF816Q0VGE8 651 aaPredicted RBP10.52□□□□□ -0.72
HIF3A-201ENST00000244302 SELENOHQ8IZQ5 122 aaKnown RBP10.52□□□□□ -0.72
HIF3A-201ENST00000244302 LGI3Q8N145 548 aa10.52□□□□□ -0.72
HIF3A-201ENST00000244302 ABHD12Q8N2K0 398 aa10.52□□□□□ -0.72
HIF3A-201ENST00000244302 SLC35G3Q8N808 338 aa10.52□□□□□ -0.72
HIF3A-201ENST00000244302 LFNGQ8NES3 379 aa10.52□□□□□ -0.72
HIF3A-201ENST00000244302 SFT2D1Q8WV19 159 aa10.52□□□□□ -0.72
HIF3A-201ENST00000244302 C18orf12Q96KH6 178 aa10.52□□□□□ -0.72
HIF3A-201ENST00000244302 TMEM222Q9H0R3 208 aa10.52□□□□□ -0.72
HIF3A-201ENST00000244302 NXPH3O95157 252 aa10.52□□□□□ -0.73
HIF3A-201ENST00000244302 MBPP02686 304 aaPredicted RBP10.52□□□□□ -0.73
HIF3A-201ENST00000244302 MEOX2P50222 304 aa10.52□□□□□ -0.73
HIF3A-201ENST00000244302 PAX2Q02962 417 aa10.52□□□□□ -0.73
HIF3A-201ENST00000244302 CLEC2AQ6UVW9 174 aa10.52□□□□□ -0.73
HIF3A-201ENST00000244302 SLC25A48Q6ZT89 311 aaKnown RBP10.52□□□□□ -0.73
HIF3A-201ENST00000244302 SMDT1Q9H4I9 107 aa10.52□□□□□ -0.73
HIF3A-201ENST00000244302 PLA2G2EQ9NZK7 142 aa10.52□□□□□ -0.73
HIF3A-201ENST00000244302 TLN2Q9Y4G6 2542 aa10.52□□□□□ -0.73
HIF3A-201ENST00000244302 ITPR3Q14573 2671 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 TRBV23-1A0A0A0MS06 115 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 A0A1B0GW64 132 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 PCP4L1A6NKN8 68 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 C1orf196B1AJZ1 125 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 DUTP33316 252 aaKnown RBP10.51□□□□□ -0.73
HIF3A-201ENST00000244302 B2MP61769 119 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 CLEC12BQ2HXU8 276 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 Q6ZRM9 215 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 C8orf46Q8TAG6 207 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 EDARADDQ8WWZ3 215 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 PBDC1Q9BVG4 233 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 TMED3Q9Y3Q3 217 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 J3QR06 171 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 CDS2O95674 445 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 MT-ND4LP03901 98 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 S100A8P05109 93 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 MIDNQ504T8 468 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.51□□□□□ -0.73
HIF3A-201ENST00000244302 VKORC1L1Q8N0U8 176 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 OR52M1Q8NGK5 317 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 TCTEX1D2Q8WW35 142 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 AKR1E2Q96JD6 320 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 PIMREGQ9BSJ6 248 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 TMEM133Q9H2Q1 129 aa10.51□□□□□ -0.73
HIF3A-201ENST00000244302 FLNBO75369 2602 aaKnown RBP10.5□□□□□ -0.73
HIF3A-201ENST00000244302 C9JQL5 133 aa10.5□□□□□ -0.73
HIF3A-201ENST00000244302 ST8SIA3O43173 380 aa10.5□□□□□ -0.73
HIF3A-201ENST00000244302 LIPFP07098 398 aa10.5□□□□□ -0.73
HIF3A-201ENST00000244302 UCP1P25874 307 aa10.5□□□□□ -0.73
HIF3A-201ENST00000244302 GUK1Q16774 197 aa10.5□□□□□ -0.73
HIF3A-201ENST00000244302 HCP5Q6MZN7 132 aa10.5□□□□□ -0.73
HIF3A-201ENST00000244302 ZNF383Q8NA42 475 aa10.5□□□□□ -0.73
HIF3A-201ENST00000244302 ACANP16112 2415 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms