RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 PDZD9Q8IXQ8 264 aa14.12□□□□□ -0.15
HOXC6-201ENST00000243108 ZC4H2Q9NQZ6 224 aa14.12□□□□□ -0.15
HOXC6-201ENST00000243108 FBXL17Q9UF56 701 aa14.12□□□□□ -0.15
HOXC6-201ENST00000243108 MDFIC2A0A1B0GVS7 189 aa14.11□□□□□ -0.15
HOXC6-201ENST00000243108 DNAJC9-AS1A6NH13 148 aa14.11□□□□□ -0.15
HOXC6-201ENST00000243108 ST8SIA5O15466 376 aa14.11□□□□□ -0.15
HOXC6-201ENST00000243108 EIF5AP63241 154 aaKnown RBP14.11□□□□□ -0.15
HOXC6-201ENST00000243108 TMEM30BQ3MIR4 351 aa14.11□□□□□ -0.15
HOXC6-201ENST00000243108 FAM74A1Q5RGS3 127 aa14.11□□□□□ -0.15
HOXC6-201ENST00000243108 C12orf54Q6X4T0 127 aa14.11□□□□□ -0.15
HOXC6-201ENST00000243108 BRD3OSQ6XYD6 125 aa14.11□□□□□ -0.15
HOXC6-201ENST00000243108 C9orf139Q6ZV77 190 aa14.11□□□□□ -0.15
HOXC6-201ENST00000243108 CXorf58Q96LI9 332 aa14.11□□□□□ -0.15
HOXC6-201ENST00000243108 HSD17B10Q99714 261 aaKnown RBP14.11□□□□□ -0.15
HOXC6-201ENST00000243108 ZNF729A6NN14 1252 aaPredicted RBP14.1□□□□□ -0.15
HOXC6-201ENST00000243108 HAX1O00165 279 aa14.1□□□□□ -0.15
HOXC6-201ENST00000243108 PVALBP20472 110 aaPredicted RBP14.1□□□□□ -0.15
HOXC6-201ENST00000243108 BRWD1-AS2P59051 145 aa14.1□□□□□ -0.15
HOXC6-201ENST00000243108 LTC4SQ16873 150 aa14.1□□□□□ -0.15
HOXC6-201ENST00000243108 RPL7L1Q6DKI1 246 aaKnown RBP14.1□□□□□ -0.15
HOXC6-201ENST00000243108 TAF15Q92804 592 aaKnown RBP eCLIP14.1□□□□□ -0.15
HOXC6-201ENST00000243108 MS4A7Q9GZW8 240 aaPredicted RBP14.1□□□□□ -0.15
HOXC6-201ENST00000243108 GFOD1Q9NXC2 390 aa14.1□□□□□ -0.15
HOXC6-201ENST00000243108 PKD1L1Q8TDX9 2849 aa14.1□□□□□ -0.15
HOXC6-201ENST00000243108 DVL1O14640 695 aa14.1□□□□□ -0.15
HOXC6-201ENST00000243108 TMPRSS2O15393 492 aa14.1□□□□□ -0.15
HOXC6-201ENST00000243108 NDUFA2O43678 99 aa14.1□□□□□ -0.15
HOXC6-201ENST00000243108 ENSAO43768 121 aaKnown RBP14.1□□□□□ -0.15
HOXC6-201ENST00000243108 P0C879 139 aa14.1□□□□□ -0.15
HOXC6-201ENST00000243108 PRTN3P24158 256 aa14.1□□□□□ -0.15
HOXC6-201ENST00000243108 LPAR6P43657 344 aa14.1□□□□□ -0.15
HOXC6-201ENST00000243108 AKR1C2P52895 323 aa14.1□□□□□ -0.15
HOXC6-201ENST00000243108 Q3ZCU0 254 aa14.1□□□□□ -0.15
HOXC6-201ENST00000243108 Q6ZRM9 215 aa14.1□□□□□ -0.15
HOXC6-201ENST00000243108 OR2C3Q8N628 320 aa14.1□□□□□ -0.15
HOXC6-201ENST00000243108 RNASE11Q8TAA1 199 aaKnown RBP14.1□□□□□ -0.15
HOXC6-201ENST00000243108 TBX15Q96SF7 602 aa14.1□□□□□ -0.15
HOXC6-201ENST00000243108 KAAG1Q9UBP8 84 aa14.1□□□□□ -0.15
HOXC6-201ENST00000243108 GAB2Q9UQC2 676 aa14.1□□□□□ -0.15
HOXC6-201ENST00000243108 SSSCA1O60232 199 aa14.09□□□□□ -0.15
HOXC6-201ENST00000243108 RAMP3O60896 148 aa14.09□□□□□ -0.15
HOXC6-201ENST00000243108 JTBO76095 146 aa14.09□□□□□ -0.15
HOXC6-201ENST00000243108 GPR12P47775 334 aa14.09□□□□□ -0.15
HOXC6-201ENST00000243108 TCTEX1D2Q8WW35 142 aa14.09□□□□□ -0.15
HOXC6-201ENST00000243108 BSCL2Q96G97 398 aaPredicted RBP14.09□□□□□ -0.15
HOXC6-201ENST00000243108 PCGF1Q9BSM1 259 aa14.09□□□□□ -0.15
HOXC6-201ENST00000243108 IFI27L2Q9H2X8 130 aa14.09□□□□□ -0.15
HOXC6-201ENST00000243108 LYRM2Q9NU23 88 aaPredicted RBP14.09□□□□□ -0.15
HOXC6-201ENST00000243108 COA4Q9NYJ1 87 aa14.09□□□□□ -0.15
HOXC6-201ENST00000243108 CACNG5Q9UF02 275 aa14.09□□□□□ -0.15
HOXC6-201ENST00000243108 MMP24Q9Y5R2 645 aa14.09□□□□□ -0.15
HOXC6-201ENST00000243108 LINC00312Q9Y6C7 94 aa14.09□□□□□ -0.15
HOXC6-201ENST00000243108 TRRAPQ9Y4A5 3859 aa14.08□□□□□ -0.15
HOXC6-201ENST00000243108 hADV38S2A0JD32 116 aa14.08□□□□□ -0.16
HOXC6-201ENST00000243108 C17orf98A8MV24 154 aa14.08□□□□□ -0.16
HOXC6-201ENST00000243108 FGF16O43320 207 aa14.08□□□□□ -0.16
HOXC6-201ENST00000243108 PROP1O75360 226 aa14.08□□□□□ -0.16
HOXC6-201ENST00000243108 OMGP23515 440 aa14.08□□□□□ -0.16
HOXC6-201ENST00000243108 ZNF134P52741 427 aa14.08□□□□□ -0.16
HOXC6-201ENST00000243108 MEF2CQ06413 473 aaPredicted RBP14.08□□□□□ -0.16
HOXC6-201ENST00000243108 RUSC1-AS1Q66K80 236 aa14.08□□□□□ -0.16
HOXC6-201ENST00000243108 RBMS3Q6XE24 437 aaKnown RBP14.08□□□□□ -0.16
HOXC6-201ENST00000243108 SPAG16Q8N0X2 631 aa14.08□□□□□ -0.16
HOXC6-201ENST00000243108 UBAC2Q8NBM4 344 aa14.08□□□□□ -0.16
HOXC6-201ENST00000243108 LRRC20Q8TCA0 184 aa14.08□□□□□ -0.16
HOXC6-201ENST00000243108 MAGT1Q9H0U3 335 aa14.08□□□□□ -0.16
HOXC6-201ENST00000243108 ARV1Q9H2C2 271 aa14.08□□□□□ -0.16
HOXC6-201ENST00000243108 TAS2R3Q9NYW6 316 aa14.08□□□□□ -0.16
HOXC6-201ENST00000243108 IDI2-AS1Q9NZ38 188 aa14.08□□□□□ -0.16
HOXC6-201ENST00000243108 SLC25A10Q9UBX3 287 aaPredicted RBP14.08□□□□□ -0.16
HOXC6-201ENST00000243108 LINC00473A8K010 186 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 TMEM50AO95807 157 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 DUTP33316 252 aaKnown RBP14.07□□□□□ -0.16
HOXC6-201ENST00000243108 RAB7AP51149 207 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 EWSR1Q01844 656 aaKnown RBP eCLIP14.07□□□□□ -0.16
HOXC6-201ENST00000243108 IZUMO4Q1ZYL8 232 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 TMED6Q8WW62 240 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 SIRPDQ9H106 197 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 IGSF23A1L1A6 192 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 MFSD2BA6NFX1 497 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 CHST1O43916 411 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 ATG12O94817 140 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 NDUFB7P17568 137 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 PAX9P55771 341 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 VAMP2P63027 116 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 AANATQ16613 207 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 DEFB112Q30KQ8 113 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 AWAT1Q58HT5 328 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 ZNF439Q8NDP4 499 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 CD300LFQ8TDQ1 290 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 ABHD14AQ9BUJ0 271 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 SMIM3Q9BZL3 60 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 SLC25A31Q9H0C2 315 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 PFDN2Q9UHV9 154 aa14.07□□□□□ -0.16
HOXC6-201ENST00000243108 RPUSD1Q9UJJ7 312 aaKnown RBP14.07□□□□□ -0.16
HOXC6-201ENST00000243108 CENPVL3A0A0U1RRI6 287 aa14.06□□□□□ -0.16
HOXC6-201ENST00000243108 FAM24AA6NFZ4 105 aa14.06□□□□□ -0.16
HOXC6-201ENST00000243108 FAM90A26D6RGX4 464 aa14.06□□□□□ -0.16
HOXC6-201ENST00000243108 WRBO00258 174 aa14.06□□□□□ -0.16
HOXC6-201ENST00000243108 S1PR2O95136 353 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms