RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 ITPR1Q14643 2758 aa15.15■□□□□ 0.02
HOXC11-201ENST00000243082 A0A1B0GV50 99 aa15.15■□□□□ 0.02
HOXC11-201ENST00000243082 GPR37O15354 613 aa15.15■□□□□ 0.02
HOXC11-201ENST00000243082 F12P00748 615 aaPredicted RBP15.15■□□□□ 0.02
HOXC11-201ENST00000243082 DAOP14920 347 aa15.15■□□□□ 0.02
HOXC11-201ENST00000243082 CCL20P78556 96 aa15.15■□□□□ 0.02
HOXC11-201ENST00000243082 OR4A16Q8NH70 328 aa15.15■□□□□ 0.02
HOXC11-201ENST00000243082 IFNA17P01571 189 aa15.14■□□□□ 0.01
HOXC11-201ENST00000243082 H2AFB1P0C5Y9 115 aa15.14■□□□□ 0.01
HOXC11-201ENST00000243082 CT45A6P0DMU7 189 aa15.14■□□□□ 0.01
HOXC11-201ENST00000243082 CT45A5P0DMU8 189 aa15.14■□□□□ 0.01
HOXC11-201ENST00000243082 CT45A7P0DMV0 189 aa15.14■□□□□ 0.01
HOXC11-201ENST00000243082 HFEQ30201 348 aa15.14■□□□□ 0.01
HOXC11-201ENST00000243082 PDLIM3Q53GG5 364 aaPredicted RBP15.14■□□□□ 0.01
HOXC11-201ENST00000243082 DPPA3Q6W0C5 159 aa15.14■□□□□ 0.01
HOXC11-201ENST00000243082 LFNGQ8NES3 379 aa15.14■□□□□ 0.01
HOXC11-201ENST00000243082 OR52E5Q8NH55 327 aa15.14■□□□□ 0.01
HOXC11-201ENST00000243082 RBMXL1Q96E39 390 aaKnown RBP15.14■□□□□ 0.01
HOXC11-201ENST00000243082 PSMG3Q9BT73 122 aaPredicted RBP15.14■□□□□ 0.01
HOXC11-201ENST00000243082 HIPK2Q9H2X6 1198 aa15.14■□□□□ 0.01
HOXC11-201ENST00000243082 DNASE2O00115 360 aaPredicted RBP15.14■□□□□ 0.01
HOXC11-201ENST00000243082 NDUFA2O43678 99 aa15.14■□□□□ 0.01
HOXC11-201ENST00000243082 COL8A2P25067 703 aa15.14■□□□□ 0.01
HOXC11-201ENST00000243082 SPCS3P61009 180 aa15.14■□□□□ 0.01
HOXC11-201ENST00000243082 PEA15Q15121 130 aa15.14■□□□□ 0.01
HOXC11-201ENST00000243082 COL6A6A6NMZ7 2263 aa15.13■□□□□ 0.01
HOXC11-201ENST00000243082 LYNX1G3V0Z9 82 aa15.13■□□□□ 0.01
HOXC11-201ENST00000243082 LYNX1P0DP58 116 aa15.13■□□□□ 0.01
HOXC11-201ENST00000243082 ATP6V1FQ16864 119 aa15.13■□□□□ 0.01
HOXC11-201ENST00000243082 TAF15Q92804 592 aaKnown RBP eCLIP15.13■□□□□ 0.01
HOXC11-201ENST00000243082 RHOVQ96L33 236 aa15.13■□□□□ 0.01
HOXC11-201ENST00000243082 EIF5A2Q9GZV4 153 aaKnown RBP15.13■□□□□ 0.01
HOXC11-201ENST00000243082 PIEZO1Q92508 2521 aa15.13■□□□□ 0.01
HOXC11-201ENST00000243082 UBE2L5PA0A1B0GUS4 154 aa15.12■□□□□ 0.01
HOXC11-201ENST00000243082 A0A1B0GW64 132 aa15.12■□□□□ 0.01
HOXC11-201ENST00000243082 C15orf62A8K5M9 175 aa15.12■□□□□ 0.01
HOXC11-201ENST00000243082 NUPL2O15504 423 aaKnown RBP15.12■□□□□ 0.01
HOXC11-201ENST00000243082 DLX6P56179 175 aa15.12■□□□□ 0.01
HOXC11-201ENST00000243082 RPS16P62249 146 aaKnown RBP15.12■□□□□ 0.01
HOXC11-201ENST00000243082 ZNF429Q86V71 674 aa15.12■□□□□ 0.01
HOXC11-201ENST00000243082 OR10P1Q8NGE3 313 aa15.12■□□□□ 0.01
HOXC11-201ENST00000243082 VSIRQ9H7M9 311 aa15.12■□□□□ 0.01
HOXC11-201ENST00000243082 VDAC2P45880 294 aaPredicted RBP15.12■□□□□ 0.01
HOXC11-201ENST00000243082 GNB2P62879 340 aa15.12■□□□□ 0.01
HOXC11-201ENST00000243082 OR4A47Q6IF82 309 aa15.12■□□□□ 0.01
HOXC11-201ENST00000243082 ZNF833PQ6ZTB9 187 aa15.12■□□□□ 0.01
HOXC11-201ENST00000243082 PINX1Q96BK5 328 aaKnown RBP15.12■□□□□ 0.01
HOXC11-201ENST00000243082 TMEM147Q9BVK8 224 aa15.12■□□□□ 0.01
HOXC11-201ENST00000243082 RPRMQ9NS64 109 aa15.12■□□□□ 0.01
HOXC11-201ENST00000243082 BTBD17A6NE02 478 aa15.11■□□□□ 0.01
HOXC11-201ENST00000243082 FAM74A7A6NL05 159 aa15.11■□□□□ 0.01
HOXC11-201ENST00000243082 ARG1P05089 322 aa15.11■□□□□ 0.01
HOXC11-201ENST00000243082 PPT1P50897 306 aa15.11■□□□□ 0.01
HOXC11-201ENST00000243082 SERF2P84101 59 aa15.11■□□□□ 0.01
HOXC11-201ENST00000243082 TLE4Q04727 773 aa15.11■□□□□ 0.01
HOXC11-201ENST00000243082 POU2AF1Q16633 256 aa15.11■□□□□ 0.01
HOXC11-201ENST00000243082 FAM74A3Q4VXF1 159 aa15.11■□□□□ 0.01
HOXC11-201ENST00000243082 SFT2D1Q8WV19 159 aa15.11■□□□□ 0.01
HOXC11-201ENST00000243082 PBDC1Q9BVG4 233 aa15.11■□□□□ 0.01
HOXC11-201ENST00000243082 C15orf61A6NNL5 157 aa15.1■□□□□ 0.01
HOXC11-201ENST00000243082 LY86O95711 162 aa15.1■□□□□ 0.01
HOXC11-201ENST00000243082 NPBWR1P48145 328 aa15.1■□□□□ 0.01
HOXC11-201ENST00000243082 PPOXP50336 477 aa15.1■□□□□ 0.01
HOXC11-201ENST00000243082 VWC2Q2TAL6 325 aa15.1■□□□□ 0.01
HOXC11-201ENST00000243082 TMEM155Q4W5P6 130 aa15.1■□□□□ 0.01
HOXC11-201ENST00000243082 CENPVQ7Z7K6 275 aaPredicted RBP15.1■□□□□ 0.01
HOXC11-201ENST00000243082 IGKV1-16P04430 117 aa15.1■□□□□ 0.01
HOXC11-201ENST00000243082 ZNF596Q8TC21 504 aa15.1■□□□□ 0.01
HOXC11-201ENST00000243082 RARRES2Q99969 163 aa15.1■□□□□ 0.01
HOXC11-201ENST00000243082 SLC35D1Q9NTN3 355 aa15.1■□□□□ 0.01
HOXC11-201ENST00000243082 TCF19Q9Y242 345 aa15.1■□□□□ 0.01
HOXC11-201ENST00000243082 LRBAP50851 2863 aa15.1■□□□□ 0.01
HOXC11-201ENST00000243082 SNAPINO95295 136 aa15.09■□□□□ 0.01
HOXC11-201ENST00000243082 FSTL3O95633 263 aa15.09■□□□□ 0.01
HOXC11-201ENST00000243082 HRASP01112 189 aa15.09■□□□□ 0.01
HOXC11-201ENST00000243082 IL6RP08887 468 aaPredicted RBP15.09■□□□□ 0.01
HOXC11-201ENST00000243082 ABCA4P78363 2273 aa15.09■□□□□ 0.01
HOXC11-201ENST00000243082 TET2Q6N021 2002 aaPredicted RBP15.09■□□□□ 0.01
HOXC11-201ENST00000243082 TMEM14BQ9NUH8 114 aa15.09■□□□□ 0.01
HOXC11-201ENST00000243082 KIAA1456Q9P272 454 aa15.09■□□□□ 0.01
HOXC11-201ENST00000243082 FOXA2Q9Y261 457 aaPredicted RBP15.09■□□□□ 0.01
HOXC11-201ENST00000243082 TIMM9Q9Y5J7 89 aa15.09■□□□□ 0.01
HOXC11-201ENST00000243082 TRAV1-1A0A0B4J248 108 aa15.09■□□□□ 0.01
HOXC11-201ENST00000243082 SRRM4A7MD48 611 aaKnown RBP15.09■□□□□ 0.01
HOXC11-201ENST00000243082 TSPAN4O14817 238 aa15.09■□□□□ 0.01
HOXC11-201ENST00000243082 MDKP21741 143 aaPredicted RBP15.09■□□□□ 0.01
HOXC11-201ENST00000243082 ZNF726P1Q15940 193 aa15.09■□□□□ 0.01
HOXC11-201ENST00000243082 C11orf42Q8N5U0 333 aa15.09■□□□□ 0.01
HOXC11-201ENST00000243082 LINC00311Q8N616 119 aa15.09■□□□□ 0.01
HOXC11-201ENST00000243082 C8orf31Q8N9H6 132 aa15.09■□□□□ 0.01
HOXC11-201ENST00000243082 OR13D1Q8NGV5 346 aa15.09■□□□□ 0.01
HOXC11-201ENST00000243082 KPTNQ9Y664 436 aa15.09■□□□□ 0.01
HOXC11-201ENST00000243082 RBFOX3A6NFN3 312 aa15.08■□□□□ 0
HOXC11-201ENST00000243082 J3QR06 171 aa15.08■□□□□ 0
HOXC11-201ENST00000243082 IGHV2-70P01814 119 aa15.08■□□□□ 0
HOXC11-201ENST00000243082 RTL8BQ17RB0 113 aa15.08■□□□□ 0
HOXC11-201ENST00000243082 DHRS7BQ6IAN0 325 aaPredicted RBP15.08■□□□□ 0
HOXC11-201ENST00000243082 ZNF841Q6ZN19 808 aa15.08■□□□□ 0
HOXC11-201ENST00000243082 RAB39BQ96DA2 213 aa15.08■□□□□ 0
HOXC11-201ENST00000243082 MRPL20Q9BYC9 149 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms