RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 CFAP161Q6P656 301 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 PCSK4Q6UW60 755 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 SF3B5Q9BWJ5 86 aaKnown RBP11.41□□□□□ -0.58
NEK9-201ENST00000238616 RBKSQ9H477 322 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 PITX3O75364 302 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 NDUFA3O95167 84 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 HPRT1P00492 218 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 CNTFRP26992 372 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 HOXA6P31267 233 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 DRD3P35462 400 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 ABHD12Q8N2K0 398 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 CYB561D1Q8N8Q1 229 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 C10orf35Q96D05 121 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 PCDH15Q96QU1 1955 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 IGLV3-25P01717 112 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 SCTP09683 121 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 PRSS42Q7Z5A4 293 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 FAM74A7A6NL05 159 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 F12P00748 615 aaPredicted RBP11.41□□□□□ -0.58
NEK9-201ENST00000238616 MC5RP33032 325 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 RBM11P57052 281 aaKnown RBP11.41□□□□□ -0.58
NEK9-201ENST00000238616 SELENOTP62341 195 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 BIVMQ86UB2 503 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 RPL36A-HNRNPH2H7BZ11 118 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 PSCAO43653 123 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 KLK8O60259 260 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 LEPROTL1O95214 131 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 IL11P20809 199 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 PRB3Q04118 309 aaPredicted RBP11.41□□□□□ -0.58
NEK9-201ENST00000238616 C12orf73Q69YU5 71 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 ERASQ7Z444 233 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 IGHV3OR16-8A0A075B7F1 116 aa11.41□□□□□ -0.58
NEK9-201ENST00000238616 NXT2Q9NPJ8 142 aaKnown RBP11.41□□□□□ -0.58
NEK9-201ENST00000238616 ANKRD20A5PA0PJZ0 165 aa11.4□□□□□ -0.58
NEK9-201ENST00000238616 QTRT1Q9BXR0 403 aaKnown RBP11.4□□□□□ -0.58
NEK9-201ENST00000238616 PKIAP61925 76 aa11.4□□□□□ -0.58
NEK9-201ENST00000238616 SAPCD1Q5SSQ6 148 aa11.4□□□□□ -0.58
NEK9-201ENST00000238616 OR1P1Q8NH06 330 aa11.4□□□□□ -0.58
NEK9-201ENST00000238616 ZNF385AQ96PM9 386 aaKnown RBP11.4□□□□□ -0.58
NEK9-201ENST00000238616 CTXND1A0A1B0GTU2 59 aa11.4□□□□□ -0.58
NEK9-201ENST00000238616 MVDP53602 400 aa11.4□□□□□ -0.58
NEK9-201ENST00000238616 GOLT1AQ6ZVE7 132 aa11.4□□□□□ -0.58
NEK9-201ENST00000238616 FAM168AQ92567 244 aa11.4□□□□□ -0.58
NEK9-201ENST00000238616 TMEM127O75204 238 aa11.4□□□□□ -0.58
NEK9-201ENST00000238616 EIF3GO75821 320 aaKnown RBP eCLIP11.4□□□□□ -0.58
NEK9-201ENST00000238616 CXCL3P19876 107 aa11.4□□□□□ -0.58
NEK9-201ENST00000238616 RSPO4Q2I0M5 234 aaPredicted RBP11.4□□□□□ -0.58
NEK9-201ENST00000238616 TRAV8-6A0A0B4J262 113 aa11.4□□□□□ -0.58
NEK9-201ENST00000238616 UPK3AO75631 287 aa11.4□□□□□ -0.58
NEK9-201ENST00000238616 WNT10AQ9GZT5 417 aa11.4□□□□□ -0.58
NEK9-201ENST00000238616 ELOA3CA0A087WX78 387 aaPredicted RBP11.4□□□□□ -0.59
NEK9-201ENST00000238616 J3QT63 122 aa11.39□□□□□ -0.59
NEK9-201ENST00000238616 OR2H2O95918 312 aa11.39□□□□□ -0.59
NEK9-201ENST00000238616 CTSSP25774 331 aa11.39□□□□□ -0.59
NEK9-201ENST00000238616 FAM3BP58499 235 aaPredicted RBP11.39□□□□□ -0.59
NEK9-201ENST00000238616 CRPP02741 224 aa11.39□□□□□ -0.59
NEK9-201ENST00000238616 SRD5A1P18405 259 aa11.39□□□□□ -0.59
NEK9-201ENST00000238616 PNKDQ8N490 385 aa11.39□□□□□ -0.59
NEK9-201ENST00000238616 DLL1O00548 723 aa11.39□□□□□ -0.59
NEK9-201ENST00000238616 TGIF1Q15583 401 aa11.39□□□□□ -0.59
NEK9-201ENST00000238616 OR10AG1Q8NH19 301 aa11.39□□□□□ -0.59
NEK9-201ENST00000238616 SPG11Q96JI7 2443 aa11.39□□□□□ -0.59
NEK9-201ENST00000238616 SIPA1L3O60292 1781 aaPredicted RBP11.39□□□□□ -0.59
NEK9-201ENST00000238616 ERGP11308 486 aa11.39□□□□□ -0.59
NEK9-201ENST00000238616 RNASEH2CQ8TDP1 164 aaKnown RBP11.39□□□□□ -0.59
NEK9-201ENST00000238616 NPBWR2P48146 333 aa11.39□□□□□ -0.59
NEK9-201ENST00000238616 NRN1LQ496H8 165 aa11.39□□□□□ -0.59
NEK9-201ENST00000238616 TCF24Q7RTU0 167 aa11.39□□□□□ -0.59
NEK9-201ENST00000238616 RNF133Q8WVZ7 376 aa11.39□□□□□ -0.59
NEK9-201ENST00000238616 SPSB4Q96A44 273 aa11.39□□□□□ -0.59
NEK9-201ENST00000238616 ARHGAP32A7KAX9 2087 aa11.39□□□□□ -0.59
NEK9-201ENST00000238616 TRGC1P0CF51 173 aa11.39□□□□□ -0.59
NEK9-201ENST00000238616 MRPL18Q9H0U6 180 aaKnown RBP11.39□□□□□ -0.59
NEK9-201ENST00000238616 DUSP15Q9H1R2 295 aaPredicted RBP11.39□□□□□ -0.59
NEK9-201ENST00000238616 IGHV4-39P01824 125 aa11.38□□□□□ -0.59
NEK9-201ENST00000238616 C9orf40Q8IXQ3 194 aa11.38□□□□□ -0.59
NEK9-201ENST00000238616 IGHV1-69-2A0A0G2JMI3 117 aa11.38□□□□□ -0.59
NEK9-201ENST00000238616 A0A1W2PQM1 296 aa11.38□□□□□ -0.59
NEK9-201ENST00000238616 ATP1A1-AS1Q5TC04 95 aa11.38□□□□□ -0.59
NEK9-201ENST00000238616 EML5Q05BV3 1969 aa11.38□□□□□ -0.59
NEK9-201ENST00000238616 NLRC5Q86WI3 1866 aa11.38□□□□□ -0.59
NEK9-201ENST00000238616 PRR33A8MZF0 331 aa11.38□□□□□ -0.59
NEK9-201ENST00000238616 RUNX1Q01196 453 aa11.38□□□□□ -0.59
NEK9-201ENST00000238616 SSBP3Q9BWW4 388 aaPredicted RBP11.38□□□□□ -0.59
NEK9-201ENST00000238616 CHST5Q9GZS9 411 aa11.38□□□□□ -0.59
NEK9-201ENST00000238616 PARLQ9H300 379 aa11.38□□□□□ -0.59
NEK9-201ENST00000238616 DNAJC4Q9NNZ3 241 aa11.38□□□□□ -0.59
NEK9-201ENST00000238616 PLXNB3Q9ULL4 1909 aa11.38□□□□□ -0.59
NEK9-201ENST00000238616 LIPFP07098 398 aa11.38□□□□□ -0.59
NEK9-201ENST00000238616 MPV17P39210 176 aa11.38□□□□□ -0.59
NEK9-201ENST00000238616 SMRP1Q8NCR6 262 aa11.38□□□□□ -0.59
NEK9-201ENST00000238616 MIC13Q5XKP0 118 aa11.38□□□□□ -0.59
NEK9-201ENST00000238616 AHRRA9YTQ3 701 aa11.38□□□□□ -0.59
NEK9-201ENST00000238616 ACSF3Q4G176 576 aaPredicted RBP11.38□□□□□ -0.59
NEK9-201ENST00000238616 WDR82Q6UXN9 313 aa11.38□□□□□ -0.59
NEK9-201ENST00000238616 FAM214BQ7L5A3 538 aa11.38□□□□□ -0.59
NEK9-201ENST00000238616 RBMY1BA6NDE4 496 aaKnown RBP11.37□□□□□ -0.59
NEK9-201ENST00000238616 RBMY1EA6NEQ0 496 aaKnown RBP11.37□□□□□ -0.59
NEK9-201ENST00000238616 RBMY1DP0C7P1 496 aaKnown RBP11.37□□□□□ -0.59
NEK9-201ENST00000238616 RBMY1A1P0DJD3 496 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms