RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 IGLV1-44P01699 117 aa13.53□□□□□ -0.24
LTBR-201ENST00000228918 GZMHP20718 246 aa13.53□□□□□ -0.24
LTBR-201ENST00000228918 GCH1P30793 250 aa13.53□□□□□ -0.24
LTBR-201ENST00000228918 DUTP33316 252 aaKnown RBP13.53□□□□□ -0.24
LTBR-201ENST00000228918 RELQ04864 619 aaPredicted RBP13.53□□□□□ -0.24
LTBR-201ENST00000228918 EDDM3AQ14507 147 aa13.53□□□□□ -0.24
LTBR-201ENST00000228918 RTP5Q14D33 572 aa13.53□□□□□ -0.24
LTBR-201ENST00000228918 ACOT6Q3I5F7 207 aaPredicted RBP13.53□□□□□ -0.24
LTBR-201ENST00000228918 MBNL2Q5VZF2 373 aaKnown RBP13.53□□□□□ -0.24
LTBR-201ENST00000228918 RNASEH2CQ8TDP1 164 aaKnown RBP13.53□□□□□ -0.24
LTBR-201ENST00000228918 OR5B12Q96R08 314 aa13.53□□□□□ -0.24
LTBR-201ENST00000228918 IGHV2OR16-5A0A0B4J2B6 119 aa13.52□□□□□ -0.24
LTBR-201ENST00000228918 AQP7O14520 342 aa13.52□□□□□ -0.24
LTBR-201ENST00000228918 PROP1O75360 226 aa13.52□□□□□ -0.24
LTBR-201ENST00000228918 HRASP01112 189 aa13.52□□□□□ -0.24
LTBR-201ENST00000228918 GYPAP02724 150 aa13.52□□□□□ -0.24
LTBR-201ENST00000228918 GPR12P47775 334 aa13.52□□□□□ -0.24
LTBR-201ENST00000228918 LTC4SQ16873 150 aa13.52□□□□□ -0.24
LTBR-201ENST00000228918 ELOVL1Q9BW60 279 aa13.52□□□□□ -0.24
LTBR-201ENST00000228918 GZMBP10144 247 aa13.52□□□□□ -0.25
LTBR-201ENST00000228918 EGR1P18146 543 aa13.52□□□□□ -0.25
LTBR-201ENST00000228918 PRDX2P32119 198 aa13.52□□□□□ -0.25
LTBR-201ENST00000228918 FDCSPQ8NFU4 85 aa13.52□□□□□ -0.25
LTBR-201ENST00000228918 ANAPC16Q96DE5 110 aa13.52□□□□□ -0.25
LTBR-201ENST00000228918 IGHV1-18A0A0C4DH31 117 aa13.51□□□□□ -0.25
LTBR-201ENST00000228918 FAM90A9PA6NNJ1 464 aa13.51□□□□□ -0.25
LTBR-201ENST00000228918 C11orf94C9JXX5 98 aa13.51□□□□□ -0.25
LTBR-201ENST00000228918 FCGR3BO75015 233 aa13.51□□□□□ -0.25
LTBR-201ENST00000228918 VENTXO95231 258 aa13.51□□□□□ -0.25
LTBR-201ENST00000228918 SNRPCP09234 159 aaKnown RBP13.51□□□□□ -0.25
LTBR-201ENST00000228918 CD1BP29016 333 aa13.51□□□□□ -0.25
LTBR-201ENST00000228918 CCL11P51671 97 aa13.51□□□□□ -0.25
LTBR-201ENST00000228918 TMEM183AQ8IXX5 376 aa13.51□□□□□ -0.25
LTBR-201ENST00000228918 ZNF664Q8N3J9 261 aa13.51□□□□□ -0.25
LTBR-201ENST00000228918 Q8TCH9 128 aa13.51□□□□□ -0.25
LTBR-201ENST00000228918 INTS1Q8N201 2190 aaKnown RBP13.51□□□□□ -0.25
LTBR-201ENST00000228918 PRR33A8MZF0 331 aa13.51□□□□□ -0.25
LTBR-201ENST00000228918 NKX2-8O15522 239 aa13.51□□□□□ -0.25
LTBR-201ENST00000228918 HPRT1P00492 218 aa13.51□□□□□ -0.25
LTBR-201ENST00000228918 NPPCP23582 126 aa13.51□□□□□ -0.25
LTBR-201ENST00000228918 CASP6P55212 293 aa13.51□□□□□ -0.25
LTBR-201ENST00000228918 USF2Q15853 346 aaPredicted RBP13.51□□□□□ -0.25
LTBR-201ENST00000228918 RAB1CQ92928 201 aa13.51□□□□□ -0.25
LTBR-201ENST00000228918 JPT1Q9UK76 154 aa13.51□□□□□ -0.25
LTBR-201ENST00000228918 PPP5D1E7EU14 171 aa13.5□□□□□ -0.25
LTBR-201ENST00000228918 SRSF6Q13247 344 aaKnown RBP13.5□□□□□ -0.25
LTBR-201ENST00000228918 MORN2Q502X0 79 aa13.5□□□□□ -0.25
LTBR-201ENST00000228918 GCSAMLQ5JQS6 135 aa13.5□□□□□ -0.25
LTBR-201ENST00000228918 PRAMEF5Q5TYX0 476 aa13.5□□□□□ -0.25
LTBR-201ENST00000228918 FAM90A1Q86YD7 464 aa13.5□□□□□ -0.25
LTBR-201ENST00000228918 HEATR1Q9H583 2144 aaKnown RBP13.5□□□□□ -0.25
LTBR-201ENST00000228918 GNG12Q9UBI6 72 aa13.5□□□□□ -0.25
LTBR-201ENST00000228918 IGKV1D-17A0A075B6S4 117 aa13.5□□□□□ -0.25
LTBR-201ENST00000228918 SRRM5B3KS81 715 aa13.5□□□□□ -0.25
LTBR-201ENST00000228918 SFTPCP11686 197 aa13.5□□□□□ -0.25
LTBR-201ENST00000228918 MZT1Q08AG7 82 aa13.5□□□□□ -0.25
LTBR-201ENST00000228918 TMEM249Q2WGJ8 235 aa13.5□□□□□ -0.25
LTBR-201ENST00000228918 FAM216AQ8WUB2 273 aa13.5□□□□□ -0.25
LTBR-201ENST00000228918 PLPPR2Q96GM1 343 aa13.5□□□□□ -0.25
LTBR-201ENST00000228918 PCGF1Q9BSM1 259 aa13.5□□□□□ -0.25
LTBR-201ENST00000228918 PLSCR4Q9NRQ2 329 aa13.5□□□□□ -0.25
LTBR-201ENST00000228918 TET2Q6N021 2002 aaPredicted RBP13.49□□□□□ -0.25
LTBR-201ENST00000228918 TRAV38-1A0A0B4J264 116 aa13.49□□□□□ -0.25
LTBR-201ENST00000228918 A0A1W2PPQ1 181 aa13.49□□□□□ -0.25
LTBR-201ENST00000228918 SOX15O60248 233 aa13.49□□□□□ -0.25
LTBR-201ENST00000228918 GGCTO75223 188 aaKnown RBP13.49□□□□□ -0.25
LTBR-201ENST00000228918 FAM3BP58499 235 aaPredicted RBP13.49□□□□□ -0.25
LTBR-201ENST00000228918 COA6Q5JTJ3 125 aaKnown RBP13.49□□□□□ -0.25
LTBR-201ENST00000228918 IGFL2Q6UWQ7 119 aa13.49□□□□□ -0.25
LTBR-201ENST00000228918 OR2Z1Q8NG97 314 aa13.49□□□□□ -0.25
LTBR-201ENST00000228918 OR1P1Q8NH06 330 aa13.49□□□□□ -0.25
LTBR-201ENST00000228918 SARAFQ96BY9 339 aa13.49□□□□□ -0.25
LTBR-201ENST00000228918 M0R1X1 148 aa13.48□□□□□ -0.25
LTBR-201ENST00000228918 YPEL1O60688 119 aa13.48□□□□□ -0.25
LTBR-201ENST00000228918 CD82P27701 267 aa13.48□□□□□ -0.25
LTBR-201ENST00000228918 SRP14P37108 136 aaKnown RBP13.48□□□□□ -0.25
LTBR-201ENST00000228918 OR4A16Q8NH70 328 aa13.48□□□□□ -0.25
LTBR-201ENST00000228918 YPEL2Q96QA6 119 aa13.48□□□□□ -0.25
LTBR-201ENST00000228918 DUSP13Q9UII6 198 aa13.48□□□□□ -0.25
LTBR-201ENST00000228918 SPENQ96T58 3664 aaKnown RBP13.48□□□□□ -0.25
LTBR-201ENST00000228918 MGST3O14880 152 aa13.48□□□□□ -0.25
LTBR-201ENST00000228918 RBFOX2O43251 390 aaKnown RBP eCLIP13.48□□□□□ -0.253e-10■■■■□ 19.3
LTBR-201ENST00000228918 PDE6DO43924 150 aa13.48□□□□□ -0.25
LTBR-201ENST00000228918 MPDU1O75352 247 aa13.48□□□□□ -0.25
LTBR-201ENST00000228918 VDAC2P45880 294 aaPredicted RBP13.48□□□□□ -0.25
LTBR-201ENST00000228918 EDDM3BP56851 147 aa13.48□□□□□ -0.25
LTBR-201ENST00000228918 GNB1P62873 340 aa13.48□□□□□ -0.25
LTBR-201ENST00000228918 RPP30P78346 268 aaKnown RBP13.48□□□□□ -0.25
LTBR-201ENST00000228918 CR1LQ2VPA4 569 aa13.48□□□□□ -0.25
LTBR-201ENST00000228918 PDLIM3Q53GG5 364 aaPredicted RBP13.48□□□□□ -0.25
LTBR-201ENST00000228918 C1orf174Q8IYL3 243 aa13.48□□□□□ -0.25
LTBR-201ENST00000228918 OR52E5Q8NH55 327 aa13.48□□□□□ -0.25
LTBR-201ENST00000228918 TMEM170AQ8WVE7 144 aa13.48□□□□□ -0.25
LTBR-201ENST00000228918 OPN3Q9H1Y3 402 aaPredicted RBP13.48□□□□□ -0.25
LTBR-201ENST00000228918 ZNF71Q9NQZ8 489 aaPredicted RBP13.48□□□□□ -0.25
LTBR-201ENST00000228918 PRSS46E5RG02 174 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 TNFSF13O75888 250 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 CRYAAP02489 173 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 AMBPP02760 352 aa13.47□□□□□ -0.25
LTBR-201ENST00000228918 TYMSP04818 313 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms