RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 ZCCHC14Q8WYQ9 949 aaKnown RBP15.72■□□□□ 0.11
YBX3-201ENST00000228251 EGLN1Q9GZT9 426 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 RAXQ9Y2V3 346 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 hADV38S2A0JD32 116 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 C7orf77A4D0Y5 90 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 COLCA2A8K830 154 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 TMPRSS2O15393 492 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 OR13C7P0DN81 318 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 CA7P43166 264 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 MRPS11P82912 194 aaKnown RBP15.72■□□□□ 0.11
YBX3-201ENST00000228251 HAGHQ16775 308 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 KHDC3LQ587J8 217 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 VKORC1L1Q8N0U8 176 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 Q8N7P7 452 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 OR10P1Q8NGE3 313 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 NEUROG1Q92886 237 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 ADTRPQ96IZ2 230 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 TMEM140Q9NV12 185 aa15.72■□□□□ 0.11
YBX3-201ENST00000228251 PPIAL4EA0A075B759 164 aa15.71■□□□□ 0.11
YBX3-201ENST00000228251 PRSS46E5RG02 174 aa15.71■□□□□ 0.11
YBX3-201ENST00000228251 PPIAL4DF5H284 164 aa15.71■□□□□ 0.11
YBX3-201ENST00000228251 IL6RP08887 468 aaPredicted RBP15.71■□□□□ 0.11
YBX3-201ENST00000228251 PPIAL4FP0DN26 164 aa15.71■□□□□ 0.11
YBX3-201ENST00000228251 EFNB3Q15768 340 aa15.71■□□□□ 0.11
YBX3-201ENST00000228251 ACSM6Q6P461 480 aa15.71■□□□□ 0.11
YBX3-201ENST00000228251 SSX9Q7RTT3 188 aa15.71■□□□□ 0.11
YBX3-201ENST00000228251 RPP25LQ8N5L8 163 aaKnown RBP15.71■□□□□ 0.11
YBX3-201ENST00000228251 OR10G4Q8NGN3 311 aa15.71■□□□□ 0.11
YBX3-201ENST00000228251 TUBA4BQ9H853 241 aa15.71■□□□□ 0.11
YBX3-201ENST00000228251 SMCO4Q9NRQ5 59 aa15.71■□□□□ 0.11
YBX3-201ENST00000228251 TMEM106BQ9NUM4 274 aa15.71■□□□□ 0.11
YBX3-201ENST00000228251 SLC25A10Q9UBX3 287 aaPredicted RBP15.71■□□□□ 0.11
YBX3-201ENST00000228251 PPIAL4AQ9Y536 164 aa15.71■□□□□ 0.11
YBX3-201ENST00000228251 RAB2AP61019 212 aa15.7■□□□□ 0.1
YBX3-201ENST00000228251 ERVK-16P61578 105 aa15.7■□□□□ 0.1
YBX3-201ENST00000228251 SMUG1Q53HV7 270 aa15.7■□□□□ 0.1
YBX3-201ENST00000228251 SOHLH1Q5JUK2 328 aa15.7■□□□□ 0.1
YBX3-201ENST00000228251 C1orf87Q8N0U7 546 aa15.7■□□□□ 0.1
YBX3-201ENST00000228251 PKDREJQ9NTG1 2253 aa15.7■□□□□ 0.1
YBX3-201ENST00000228251 RBMXL2O75526 392 aaKnown RBP15.7■□□□□ 0.1
YBX3-201ENST00000228251 RHEBQ15382 184 aa15.7■□□□□ 0.1
YBX3-201ENST00000228251 LYG1Q8N1E2 194 aa15.7■□□□□ 0.1
YBX3-201ENST00000228251 OR4A16Q8NH70 328 aa15.7■□□□□ 0.1
YBX3-201ENST00000228251 TMEM170AQ8WVE7 144 aa15.7■□□□□ 0.1
YBX3-201ENST00000228251 TRGV8A0A0C4DH27 118 aa15.69■□□□□ 0.1
YBX3-201ENST00000228251 C15orf61A6NNL5 157 aa15.69■□□□□ 0.1
YBX3-201ENST00000228251 VSTM5A8MXK1 200 aa15.69■□□□□ 0.1
YBX3-201ENST00000228251 TFF3Q07654 80 aa15.69■□□□□ 0.1
YBX3-201ENST00000228251 ZNF787Q6DD87 383 aa15.69■□□□□ 0.1
YBX3-201ENST00000228251 HEPN1Q6WQI6 88 aa15.69■□□□□ 0.1
YBX3-201ENST00000228251 TMEM14BQ9NUH8 114 aa15.69■□□□□ 0.1
YBX3-201ENST00000228251 CISD1Q9NZ45 108 aaKnown RBP15.69■□□□□ 0.1
YBX3-201ENST00000228251 FOXA2Q9Y261 457 aaPredicted RBP15.69■□□□□ 0.1
YBX3-201ENST00000228251 IFNA17P01571 189 aa15.68■□□□□ 0.1
YBX3-201ENST00000228251 CT45A6P0DMU7 189 aa15.68■□□□□ 0.1
YBX3-201ENST00000228251 CT45A5P0DMU8 189 aa15.68■□□□□ 0.1
YBX3-201ENST00000228251 CT45A7P0DMV0 189 aa15.68■□□□□ 0.1
YBX3-201ENST00000228251 NDUFB7P17568 137 aa15.68■□□□□ 0.1
YBX3-201ENST00000228251 FGF7P21781 194 aa15.68■□□□□ 0.1
YBX3-201ENST00000228251 AKR1C3P42330 323 aa15.68■□□□□ 0.1
YBX3-201ENST00000228251 GNG10P50151 68 aa15.68■□□□□ 0.1
YBX3-201ENST00000228251 ZNF833PQ6ZTB9 187 aa15.68■□□□□ 0.1
YBX3-201ENST00000228251 CYB561D1Q8N8Q1 229 aa15.68■□□□□ 0.1
YBX3-201ENST00000228251 RXFP4Q8TDU9 374 aa15.68■□□□□ 0.1
YBX3-201ENST00000228251 RHOVQ96L33 236 aa15.68■□□□□ 0.1
YBX3-201ENST00000228251 CLCC1Q96S66 551 aa15.68■□□□□ 0.1
YBX3-201ENST00000228251 NPCDR1Q9BY65 106 aa15.68■□□□□ 0.1
YBX3-201ENST00000228251 UNKLQ9H9P5 680 aaKnown RBP15.68■□□□□ 0.1
YBX3-201ENST00000228251 KAAG1Q9UBP8 84 aa15.68■□□□□ 0.1
YBX3-201ENST00000228251 TCF19Q9Y242 345 aa15.68■□□□□ 0.1
YBX3-201ENST00000228251 WDR83OSQ9Y284 106 aa15.68■□□□□ 0.1
YBX3-201ENST00000228251 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.67■□□□□ 0.1
YBX3-201ENST00000228251 BCL2P10415 239 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 ELLP55199 621 aaPredicted RBP15.67■□□□□ 0.1
YBX3-201ENST00000228251 RPS16P62249 146 aaKnown RBP15.67■□□□□ 0.1
YBX3-201ENST00000228251 RPL31P62899 125 aaKnown RBP15.67■□□□□ 0.1
YBX3-201ENST00000228251 FLI1Q01543 452 aaPredicted RBP15.67■□□□□ 0.1
YBX3-201ENST00000228251 TMEM200BQ69YZ2 307 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 OR4A47Q6IF82 309 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 LCN15Q6UWW0 184 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 LYPD2Q6UXB3 125 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 C15orf54Q8N8G6 183 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 GAL3ST2Q9H3Q3 398 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 RPS10P5Q9NQ39 176 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 CTSZQ9UBR2 303 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 MAP1LC3B2A6NCE7 125 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 H7C2Y5 167 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 SNRNP70P08621 437 aaKnown RBP15.67■□□□□ 0.1
YBX3-201ENST00000228251 FBP1P09467 338 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 DAOP14920 347 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 APOBEC3AP31941 199 aaPredicted RBP15.67■□□□□ 0.1
YBX3-201ENST00000228251 PLA2G5P39877 138 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 ERVFRD-1P60508 538 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 FAM122CQ6P4D5 195 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 ST6GALNAC3Q8NDV1 305 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 ZNF596Q8TC21 504 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 MAP1LC3BQ9GZQ8 125 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 MS4A5Q9H3V2 200 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 ZNRD1Q9P1U0 126 aa15.67■□□□□ 0.1
YBX3-201ENST00000228251 SIAH2O43255 324 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms