RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 K7EN84 100 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 GPX1P07203 203 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 KIR2DS4P43632 304 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 KIR2DS1Q14954 304 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 ATP6V1FQ16864 119 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 TMEM14EPQ6UXP3 125 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 OR4B1Q8NGF8 309 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 UQCR10Q9UDW1 63 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 FAM90A10PA6NDY2 464 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 FAM90A18PA6NE21 464 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 FAM90A16PA6NEW6 464 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 FAM90A20PA6NIJ5 464 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 FAM90A8PA6NJQ4 464 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 FAM90A7PA6NKC0 464 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 FAM90A22PA8MWA6 464 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 FAM90A12PA8MX19 464 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 FAM90A5PA8MXJ8 464 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 FAM90A23PA8MXZ1 464 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 RBMXL2O75526 392 aaKnown RBP11.81□□□□□ -0.52
SF1-201ENST00000227503 FAM90A15PP0C7V4 464 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 FAM90A13PP0C7W8 464 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 FAM90A14PP0C7W9 464 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 FAM90A24PP0C7X0 464 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 S100GP29377 79 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 OTX2P32243 289 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 TIMP3P35625 211 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 GFRA1P56159 465 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 ACSF3Q4G176 576 aaPredicted RBP11.81□□□□□ -0.52
SF1-201ENST00000227503 OR8I2Q8N0Y5 310 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 ZNF808Q8N4W9 903 aaPredicted RBP11.81□□□□□ -0.52
SF1-201ENST00000227503 OR4C5Q8NGB2 326 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 MAFAQ8NHW3 353 aaPredicted RBP11.81□□□□□ -0.52
SF1-201ENST00000227503 PARD6GQ9BYG4 376 aaPredicted RBP11.81□□□□□ -0.52
SF1-201ENST00000227503 ZNF586Q9NXT0 402 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 ITGB1BP1O14713 200 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 SLC25A6P12236 298 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 TMEM45BQ96B21 275 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 ZC2HC1AQ96GY0 325 aa11.81□□□□□ -0.52
SF1-201ENST00000227503 KMT2EQ8IZD2 1858 aa11.8□□□□□ -0.52
SF1-201ENST00000227503 SRSF7Q16629 238 aaKnown RBP eCLIP11.8□□□□□ -0.526e-7■□□□□ 8.9
SF1-201ENST00000227503 ORAOV1Q8WV07 137 aa11.8□□□□□ -0.52
SF1-201ENST00000227503 LOXL4Q96JB6 756 aa11.8□□□□□ -0.52
SF1-201ENST00000227503 RNF2Q99496 336 aa11.8□□□□□ -0.52
SF1-201ENST00000227503 VPS25Q9BRG1 176 aa11.8□□□□□ -0.52
SF1-201ENST00000227503 COX11Q9Y6N1 276 aa11.8□□□□□ -0.52
SF1-201ENST00000227503 RRHO14718 337 aa11.8□□□□□ -0.52
SF1-201ENST00000227503 C3orf79P0CE67 100 aa11.8□□□□□ -0.52
SF1-201ENST00000227503 ARL14EPLP0DKL9 152 aa11.8□□□□□ -0.52
SF1-201ENST00000227503 GDF1P27539 372 aa11.8□□□□□ -0.52
SF1-201ENST00000227503 NRN1LQ496H8 165 aa11.8□□□□□ -0.52
SF1-201ENST00000227503 OR5A2Q8NGI9 324 aa11.8□□□□□ -0.52
SF1-201ENST00000227503 HEATR1Q9H583 2144 aaKnown RBP11.8□□□□□ -0.52
SF1-201ENST00000227503 ZNF83P51522 516 aa11.79□□□□□ -0.52
SF1-201ENST00000227503 FGF12P61328 243 aa11.79□□□□□ -0.52
SF1-201ENST00000227503 RELBQ01201 579 aa11.79□□□□□ -0.52
SF1-201ENST00000227503 FXYD3Q14802 87 aa11.79□□□□□ -0.52
SF1-201ENST00000227503 FBLN7Q53RD9 439 aa11.79□□□□□ -0.52
SF1-201ENST00000227503 TMEM147Q9BVK8 224 aa11.79□□□□□ -0.52
SF1-201ENST00000227503 NAT8BQ9UHF3 227 aa11.79□□□□□ -0.52
SF1-201ENST00000227503 PCSK5Q92824 1860 aa11.79□□□□□ -0.52
SF1-201ENST00000227503 HCFC1P51610 2035 aa11.79□□□□□ -0.52
SF1-201ENST00000227503 DUSP3P51452 185 aaPredicted RBP11.79□□□□□ -0.52
SF1-201ENST00000227503 ARF1P84077 181 aaKnown RBP11.79□□□□□ -0.52
SF1-201ENST00000227503 LSM10Q969L4 123 aaKnown RBP11.79□□□□□ -0.52
SF1-201ENST00000227503 PRDM6Q9NQX0 595 aa11.79□□□□□ -0.52
SF1-201ENST00000227503 NCOR1O75376 2440 aa11.79□□□□□ -0.52
SF1-201ENST00000227503 TRAV24A0A0B4J272 114 aa11.78□□□□□ -0.52
SF1-201ENST00000227503 A0A1W2PS18 150 aa11.78□□□□□ -0.52
SF1-201ENST00000227503 TRAPPC2LH3BP13 241 aa11.78□□□□□ -0.52
SF1-201ENST00000227503 TSPOP30536 169 aa11.78□□□□□ -0.52
SF1-201ENST00000227503 HOXA4Q00056 320 aaPredicted RBP11.78□□□□□ -0.52
SF1-201ENST00000227503 LDLRAD2Q5SZI1 272 aa11.78□□□□□ -0.52
SF1-201ENST00000227503 OR10P1Q8NGE3 313 aa11.78□□□□□ -0.52
SF1-201ENST00000227503 TIMM9Q9Y5J7 89 aa11.78□□□□□ -0.52
SF1-201ENST00000227503 IGKV3D-15A0A087WSY6 115 aa11.78□□□□□ -0.52
SF1-201ENST00000227503 A0A096LPE4 126 aa11.78□□□□□ -0.52
SF1-201ENST00000227503 A0A1W2PPZ6 126 aa11.78□□□□□ -0.52
SF1-201ENST00000227503 TMPRSS2O15393 492 aa11.78□□□□□ -0.52
SF1-201ENST00000227503 VAMP3Q15836 100 aa11.78□□□□□ -0.52
SF1-201ENST00000227503 ZNF738Q8NE65 137 aa11.78□□□□□ -0.52
SF1-201ENST00000227503 QTRT1Q9BXR0 403 aaKnown RBP11.78□□□□□ -0.52
SF1-201ENST00000227503 ODAMA1E959 279 aa11.77□□□□□ -0.52
SF1-201ENST00000227503 PMS2P5A8MQ11 134 aa11.77□□□□□ -0.52
SF1-201ENST00000227503 MRPL33O75394 65 aaKnown RBP11.77□□□□□ -0.52
SF1-201ENST00000227503 CYB561P49447 251 aa11.77□□□□□ -0.52
SF1-201ENST00000227503 PEAR1Q5VY43 1037 aaPredicted RBP11.77□□□□□ -0.52
SF1-201ENST00000227503 DRAM1Q8N682 238 aa11.77□□□□□ -0.52
SF1-201ENST00000227503 OR2M7Q8NG81 312 aa11.77□□□□□ -0.52
SF1-201ENST00000227503 PRRG4Q9BZD6 226 aa11.77□□□□□ -0.52
SF1-201ENST00000227503 YTHDF2Q9Y5A9 579 aaKnown RBP11.77□□□□□ -0.52
SF1-201ENST00000227503 DNAJC13O75165 2243 aa11.77□□□□□ -0.52
SF1-201ENST00000227503 A0A1W2PPV4 95 aa11.77□□□□□ -0.53
SF1-201ENST00000227503 ZNF503-AS2A6NEH8 195 aa11.77□□□□□ -0.53
SF1-201ENST00000227503 RHBDL1O75783 438 aa11.77□□□□□ -0.53
SF1-201ENST00000227503 CA6P23280 308 aa11.77□□□□□ -0.53
SF1-201ENST00000227503 FOXG1P55316 489 aaPredicted RBP11.77□□□□□ -0.53
SF1-201ENST00000227503 RPL30P62888 115 aaKnown RBP11.77□□□□□ -0.53
SF1-201ENST00000227503 CEACAM21Q3KPI0 293 aa11.77□□□□□ -0.53
SF1-201ENST00000227503 MRPL54Q6P161 138 aaKnown RBP11.77□□□□□ -0.53
SF1-201ENST00000227503 LINC00470Q9BZP3 86 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms