RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 RNF5Q99942 180 aa21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 MARVELD1Q9BSK0 173 aa21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 PLSCR3Q9NRY6 295 aa21.73■■□□□ 1.07
CHMP4B-201ENST00000217402 C9orf170A2RU37 121 aa21.72■■□□□ 1.07
CHMP4B-201ENST00000217402 SLC25A17O43808 307 aa21.72■■□□□ 1.07
CHMP4B-201ENST00000217402 IGKV1-39P01597 117 aa21.72■■□□□ 1.07
CHMP4B-201ENST00000217402 IGKV1D-39P04432 117 aa21.72■■□□□ 1.07
CHMP4B-201ENST00000217402 LGALS7P47929 136 aa21.72■■□□□ 1.07
CHMP4B-201ENST00000217402 DHRS2Q13268 280 aa21.72■■□□□ 1.07
CHMP4B-201ENST00000217402 TMEM187Q14656 261 aa21.72■■□□□ 1.07
CHMP4B-201ENST00000217402 PSG5Q15238 335 aa21.72■■□□□ 1.07
CHMP4B-201ENST00000217402 R3HDM4Q96D70 268 aa21.72■■□□□ 1.07
CHMP4B-201ENST00000217402 SEC22CQ9BRL7 303 aa21.72■■□□□ 1.07
CHMP4B-201ENST00000217402 ALX4Q9H161 411 aaPredicted RBP21.72■■□□□ 1.07
CHMP4B-201ENST00000217402 COMMD9Q9P000 198 aa21.72■■□□□ 1.07
CHMP4B-201ENST00000217402 KIAA1456Q9P272 454 aa21.72■■□□□ 1.07
CHMP4B-201ENST00000217402 A0A0A6YYJ9 748 aa21.71■■□□□ 1.07
CHMP4B-201ENST00000217402 HRASP01112 189 aa21.71■■□□□ 1.07
CHMP4B-201ENST00000217402 KRASP01116 189 aa21.71■■□□□ 1.07
CHMP4B-201ENST00000217402 NQO2P16083 231 aa21.71■■□□□ 1.07
CHMP4B-201ENST00000217402 MECP2P51608 486 aaKnown RBP21.71■■□□□ 1.07
CHMP4B-201ENST00000217402 LYG2Q86SG7 212 aa21.71■■□□□ 1.07
CHMP4B-201ENST00000217402 NPBQ8NG41 125 aa21.71■■□□□ 1.07
CHMP4B-201ENST00000217402 OR8H1Q8NGG4 311 aa21.71■■□□□ 1.07
CHMP4B-201ENST00000217402 LHFPL5Q8TAF8 219 aa21.71■■□□□ 1.07
CHMP4B-201ENST00000217402 FBXL15Q9H469 300 aa21.71■■□□□ 1.07
CHMP4B-201ENST00000217402 C1RLQ9NZP8 487 aa21.71■■□□□ 1.07
CHMP4B-201ENST00000217402 RNASE1P07998 156 aaKnown RBP21.7■■□□□ 1.06
CHMP4B-201ENST00000217402 SAA1P0DJI8 122 aaPredicted RBP21.7■■□□□ 1.06
CHMP4B-201ENST00000217402 G6PCP35575 357 aa21.7■■□□□ 1.06
CHMP4B-201ENST00000217402 PLGLAQ15195 96 aa21.7■■□□□ 1.06
CHMP4B-201ENST00000217402 C16orf82Q7Z2V1 217 aa21.7■■□□□ 1.06
CHMP4B-201ENST00000217402 LURAP1LQ8IV03 231 aa21.7■■□□□ 1.06
CHMP4B-201ENST00000217402 RHOVQ96L33 236 aa21.7■■□□□ 1.06
CHMP4B-201ENST00000217402 METTL1Q9UBP6 276 aaKnown RBP21.7■■□□□ 1.06
CHMP4B-201ENST00000217402 SH2D7A6NKC9 451 aaPredicted RBP21.69■■□□□ 1.06
CHMP4B-201ENST00000217402 MARCH11A6NNE9 402 aa21.69■■□□□ 1.06
CHMP4B-201ENST00000217402 RRHO14718 337 aa21.69■■□□□ 1.06
CHMP4B-201ENST00000217402 ANKRD55Q3KP44 614 aa21.69■■□□□ 1.06
CHMP4B-201ENST00000217402 VMA21Q3ZAQ7 101 aa21.69■■□□□ 1.06
CHMP4B-201ENST00000217402 Q8N9W7 124 aa21.69■■□□□ 1.06
CHMP4B-201ENST00000217402 DMBX1Q8NFW5 382 aa21.69■■□□□ 1.06
CHMP4B-201ENST00000217402 RAB18Q9NP72 206 aa21.69■■□□□ 1.06
CHMP4B-201ENST00000217402 TPSG1Q9NRR2 321 aa21.69■■□□□ 1.06
CHMP4B-201ENST00000217402 NDUFA3O95167 84 aa21.69■■□□□ 1.06
CHMP4B-201ENST00000217402 SPDEFO95238 335 aa21.69■■□□□ 1.06
CHMP4B-201ENST00000217402 CDS2O95674 445 aa21.69■■□□□ 1.06
CHMP4B-201ENST00000217402 ERVK-16P61578 105 aa21.69■■□□□ 1.06
CHMP4B-201ENST00000217402 OXA1LQ15070 435 aa21.69■■□□□ 1.06
CHMP4B-201ENST00000217402 TMEM268Q5VZI3 342 aa21.69■■□□□ 1.06
CHMP4B-201ENST00000217402 ZNF695Q8IW36 515 aa21.69■■□□□ 1.06
CHMP4B-201ENST00000217402 FAM71E2Q8N5Q1 922 aa21.69■■□□□ 1.06
CHMP4B-201ENST00000217402 C5orf56Q8N8D9 126 aa21.69■■□□□ 1.06
CHMP4B-201ENST00000217402 FAM181BA6NEQ2 426 aa21.68■■□□□ 1.06
CHMP4B-201ENST00000217402 UBE2KP61086 200 aa21.68■■□□□ 1.06
CHMP4B-201ENST00000217402 AKR1C2P52895 323 aa21.67■■□□□ 1.06
CHMP4B-201ENST00000217402 RAG2P55895 527 aa21.67■■□□□ 1.06
CHMP4B-201ENST00000217402 C5orf64Q2M2E5 130 aa21.67■■□□□ 1.06
CHMP4B-201ENST00000217402 OR4A47Q6IF82 309 aa21.67■■□□□ 1.06
CHMP4B-201ENST00000217402 LIN54Q6MZP7 749 aa21.67■■□□□ 1.06
CHMP4B-201ENST00000217402 SELENOHQ8IZQ5 122 aaKnown RBP21.67■■□□□ 1.06
CHMP4B-201ENST00000217402 RBPMSQ93062 196 aaKnown RBP21.67■■□□□ 1.06
CHMP4B-201ENST00000217402 TMEM56Q96MV1 263 aa21.67■■□□□ 1.06
CHMP4B-201ENST00000217402 CLCC1Q96S66 551 aa21.67■■□□□ 1.06
CHMP4B-201ENST00000217402 RASL11BQ9BPW5 248 aa21.67■■□□□ 1.06
CHMP4B-201ENST00000217402 TMEM56-RWDD3S4R434 201 aa21.67■■□□□ 1.06
CHMP4B-201ENST00000217402 JMJD1CQ15652 2540 aa21.66■■□□□ 1.06
CHMP4B-201ENST00000217402 FGF16O43320 207 aa21.66■■□□□ 1.06
CHMP4B-201ENST00000217402 DHFRP00374 187 aa21.66■■□□□ 1.06
CHMP4B-201ENST00000217402 AMY1AP04745 511 aa21.66■■□□□ 1.06
CHMP4B-201ENST00000217402 SRPXP78539 464 aa21.66■■□□□ 1.06
CHMP4B-201ENST00000217402 LGI3Q8N145 548 aa21.66■■□□□ 1.06
CHMP4B-201ENST00000217402 RNASE11Q8TAA1 199 aaKnown RBP21.66■■□□□ 1.06
CHMP4B-201ENST00000217402 SEC22AQ96IW7 307 aa21.66■■□□□ 1.06
CHMP4B-201ENST00000217402 AIFM2Q9BRQ8 373 aa21.66■■□□□ 1.06
CHMP4B-201ENST00000217402 TMEM140Q9NV12 185 aa21.66■■□□□ 1.06
CHMP4B-201ENST00000217402 M0QZK8 103 aa21.66■■□□□ 1.06
CHMP4B-201ENST00000217402 DUS4LO95620 317 aaKnown RBP21.66■■□□□ 1.06
CHMP4B-201ENST00000217402 IGKV1-5P01602 117 aa21.66■■□□□ 1.06
CHMP4B-201ENST00000217402 SLC35G3Q8N808 338 aa21.66■■□□□ 1.06
CHMP4B-201ENST00000217402 TAF15Q92804 592 aaKnown RBP eCLIP21.66■■□□□ 1.06
CHMP4B-201ENST00000217402 SIGLEC9Q9Y336 463 aa21.66■■□□□ 1.06
CHMP4B-201ENST00000217402 SETD2Q9BYW2 2564 aaPredicted RBP21.65■■□□□ 1.06
CHMP4B-201ENST00000217402 TRIM77I1YAP6 450 aa21.65■■□□□ 1.06
CHMP4B-201ENST00000217402 OR2A4O95047 310 aa21.65■■□□□ 1.06
CHMP4B-201ENST00000217402 IL5P05113 134 aa21.65■■□□□ 1.06
CHMP4B-201ENST00000217402 BLCAPP62952 87 aa21.65■■□□□ 1.06
CHMP4B-201ENST00000217402 POU2AF1Q16633 256 aa21.65■■□□□ 1.06
CHMP4B-201ENST00000217402 PUSL1Q8N0Z8 303 aaKnown RBP21.65■■□□□ 1.06
CHMP4B-201ENST00000217402 ZNF431Q8TF32 576 aaPredicted RBP21.65■■□□□ 1.06
CHMP4B-201ENST00000217402 CHPT1Q8WUD6 406 aa21.65■■□□□ 1.06
CHMP4B-201ENST00000217402 OR2A7Q96R45 310 aa21.65■■□□□ 1.06
CHMP4B-201ENST00000217402 NF1P21359 2839 aa21.64■■□□□ 1.06
CHMP4B-201ENST00000217402 PRAF2O60831 178 aa21.64■■□□□ 1.05
CHMP4B-201ENST00000217402 CRYGBP07316 175 aa21.64■■□□□ 1.05
CHMP4B-201ENST00000217402 C9orf152Q5JTZ5 239 aa21.64■■□□□ 1.05
CHMP4B-201ENST00000217402 TEX45Q8NA69 505 aa21.64■■□□□ 1.05
CHMP4B-201ENST00000217402 COQ8AQ8NI60 647 aa21.64■■□□□ 1.05
CHMP4B-201ENST00000217402 VSTM2AQ8TAG5 236 aa21.64■■□□□ 1.05
CHMP4B-201ENST00000217402 IL22RA2Q969J5 263 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms