RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 PINX1Q96BK5 328 aaKnown RBP24.36■■□□□ 1.49
PABPN1-201ENST00000216727 DVL1O14640 695 aa24.35■■□□□ 1.49
PABPN1-201ENST00000216727 SCAF4O95104 1147 aaKnown RBP24.35■■□□□ 1.49
PABPN1-201ENST00000216727 OR2B8PP59922 312 aa24.35■■□□□ 1.49
PABPN1-201ENST00000216727 SERF2P84101 59 aa24.35■■□□□ 1.49
PABPN1-201ENST00000216727 TLE4Q04727 773 aa24.35■■□□□ 1.49
PABPN1-201ENST00000216727 SPSB3Q6PJ21 355 aa24.35■■□□□ 1.49
PABPN1-201ENST00000216727 ZNF429Q86V71 674 aa24.35■■□□□ 1.49
PABPN1-201ENST00000216727 RSG1Q9BU20 258 aa24.35■■□□□ 1.49
PABPN1-201ENST00000216727 CCL3L1P16619 93 aa24.35■■□□□ 1.49
PABPN1-201ENST00000216727 LY6DQ14210 128 aa24.35■■□□□ 1.49
PABPN1-201ENST00000216727 VKORC1L1Q8N0U8 176 aa24.35■■□□□ 1.49
PABPN1-201ENST00000216727 YLPM1P49750 1951 aaKnown RBP24.34■■□□□ 1.49
PABPN1-201ENST00000216727 DLL1O00548 723 aa24.34■■□□□ 1.49
PABPN1-201ENST00000216727 FSTL3O95633 263 aa24.34■■□□□ 1.49
PABPN1-201ENST00000216727 IFNA17P01571 189 aa24.34■■□□□ 1.49
PABPN1-201ENST00000216727 OR10P1Q8NGE3 313 aa24.34■■□□□ 1.49
PABPN1-201ENST00000216727 GNB2P62879 340 aa24.34■■□□□ 1.49
PABPN1-201ENST00000216727 POU2AF1Q16633 256 aa24.34■■□□□ 1.49
PABPN1-201ENST00000216727 H1FXQ92522 213 aaKnown RBP24.34■■□□□ 1.49
PABPN1-201ENST00000216727 TAF15Q92804 592 aaKnown RBP eCLIP24.34■■□□□ 1.49
PABPN1-201ENST00000216727 RAB39BQ96DA2 213 aa24.34■■□□□ 1.49
PABPN1-201ENST00000216727 TMEM147Q9BVK8 224 aa24.34■■□□□ 1.49
PABPN1-201ENST00000216727 EIF5A2Q9GZV4 153 aaKnown RBP24.34■■□□□ 1.49
PABPN1-201ENST00000216727 SMDT1Q9H4I9 107 aa24.34■■□□□ 1.49
PABPN1-201ENST00000216727 SNAPINO95295 136 aa24.33■■□□□ 1.49
PABPN1-201ENST00000216727 TFF3Q07654 80 aa24.33■■□□□ 1.49
PABPN1-201ENST00000216727 RHOVQ96L33 236 aa24.33■■□□□ 1.49
PABPN1-201ENST00000216727 TIMM9Q9Y5J7 89 aa24.33■■□□□ 1.49
PABPN1-201ENST00000216727 DOCK11Q5JSL3 2073 aa24.32■■□□□ 1.48
PABPN1-201ENST00000216727 GPR37O15354 613 aa24.32■■□□□ 1.48
PABPN1-201ENST00000216727 CT45A6P0DMU7 189 aa24.32■■□□□ 1.48
PABPN1-201ENST00000216727 CT45A5P0DMU8 189 aa24.32■■□□□ 1.48
PABPN1-201ENST00000216727 CT45A7P0DMV0 189 aa24.32■■□□□ 1.48
PABPN1-201ENST00000216727 SPINK9Q5DT21 86 aa24.32■■□□□ 1.48
PABPN1-201ENST00000216727 ZNF833PQ6ZTB9 187 aa24.32■■□□□ 1.48
PABPN1-201ENST00000216727 PIEZO1Q92508 2521 aa24.32■■□□□ 1.48
PABPN1-201ENST00000216727 DNASE2O00115 360 aaPredicted RBP24.32■■□□□ 1.48
PABPN1-201ENST00000216727 ARG1P05089 322 aa24.32■■□□□ 1.48
PABPN1-201ENST00000216727 PPOXP50336 477 aa24.32■■□□□ 1.48
PABPN1-201ENST00000216727 ERVFRD-1P60508 538 aa24.32■■□□□ 1.48
PABPN1-201ENST00000216727 CENPVQ7Z7K6 275 aaPredicted RBP24.32■■□□□ 1.48
PABPN1-201ENST00000216727 C8orf31Q8N9H6 132 aa24.32■■□□□ 1.48
PABPN1-201ENST00000216727 NBASA2RRP1 2371 aa24.31■■□□□ 1.48
PABPN1-201ENST00000216727 UBE2L5PA0A1B0GUS4 154 aa24.31■■□□□ 1.48
PABPN1-201ENST00000216727 HRASP01112 189 aa24.31■■□□□ 1.48
PABPN1-201ENST00000216727 HBE1P02100 147 aa24.31■■□□□ 1.48
PABPN1-201ENST00000216727 VWC2Q2TAL6 325 aa24.31■■□□□ 1.48
PABPN1-201ENST00000216727 DHRS7BQ6IAN0 325 aaPredicted RBP24.31■■□□□ 1.48
PABPN1-201ENST00000216727 KIAA1456Q9P272 454 aa24.31■■□□□ 1.48
PABPN1-201ENST00000216727 KPTNQ9Y664 436 aa24.31■■□□□ 1.48
PABPN1-201ENST00000216727 TRAV1-1A0A0B4J248 108 aa24.3■■□□□ 1.48
PABPN1-201ENST00000216727 TRAV3A0A0B4J244 114 aa24.3■■□□□ 1.48
PABPN1-201ENST00000216727 C15orf61A6NNL5 157 aa24.3■■□□□ 1.48
PABPN1-201ENST00000216727 C15orf62A8K5M9 175 aa24.3■■□□□ 1.48
PABPN1-201ENST00000216727 PPT1P50897 306 aa24.3■■□□□ 1.48
PABPN1-201ENST00000216727 RPP30P78346 268 aaKnown RBP24.3■■□□□ 1.48
PABPN1-201ENST00000216727 CCL20P78556 96 aa24.3■■□□□ 1.48
PABPN1-201ENST00000216727 OR4A47Q6IF82 309 aa24.3■■□□□ 1.48
PABPN1-201ENST00000216727 ZNF596Q8TC21 504 aa24.3■■□□□ 1.48
PABPN1-201ENST00000216727 CLCC1Q96S66 551 aa24.3■■□□□ 1.48
PABPN1-201ENST00000216727 RPRMQ9NS64 109 aa24.3■■□□□ 1.48
PABPN1-201ENST00000216727 A0A1B0GV50 99 aa24.29■■□□□ 1.48
PABPN1-201ENST00000216727 VDAC2P45880 294 aaPredicted RBP24.29■■□□□ 1.48
PABPN1-201ENST00000216727 DLX6P56179 175 aa24.29■■□□□ 1.48
PABPN1-201ENST00000216727 RAB2AP61019 212 aa24.29■■□□□ 1.48
PABPN1-201ENST00000216727 RTL8BQ17RB0 113 aa24.29■■□□□ 1.48
PABPN1-201ENST00000216727 TMEM155Q4W5P6 130 aa24.29■■□□□ 1.48
PABPN1-201ENST00000216727 LINC00311Q8N616 119 aa24.28■■□□□ 1.48
PABPN1-201ENST00000216727 SFT2D1Q8WV19 159 aa24.28■■□□□ 1.48
PABPN1-201ENST00000216727 RBMXL1Q96E39 390 aaKnown RBP24.28■■□□□ 1.48
PABPN1-201ENST00000216727 ZNRD1Q9P1U0 126 aa24.28■■□□□ 1.48
PABPN1-201ENST00000216727 FOXA2Q9Y261 457 aaPredicted RBP24.28■■□□□ 1.48
PABPN1-201ENST00000216727 TMEM14BQ9NUH8 114 aa24.28■■□□□ 1.48
PABPN1-201ENST00000216727 TRBV23-1A0A0A0MS06 115 aa24.27■■□□□ 1.48
PABPN1-201ENST00000216727 F12P00748 615 aaPredicted RBP24.27■■□□□ 1.48
PABPN1-201ENST00000216727 SLC35D1Q9NTN3 355 aa24.27■■□□□ 1.48
PABPN1-201ENST00000216727 A0A087X0M5 115 aa24.27■■□□□ 1.48
PABPN1-201ENST00000216727 A0A1B0GX30 115 aa24.27■■□□□ 1.48
PABPN1-201ENST00000216727 IL6RP08887 468 aaPredicted RBP24.27■■□□□ 1.48
PABPN1-201ENST00000216727 COL8A2P25067 703 aa24.27■■□□□ 1.48
PABPN1-201ENST00000216727 FAM71F2Q6NXP2 309 aa24.27■■□□□ 1.48
PABPN1-201ENST00000216727 TCF19Q9Y242 345 aa24.27■■□□□ 1.48
PABPN1-201ENST00000216727 RBFOX3A6NFN3 312 aa24.26■■□□□ 1.47
PABPN1-201ENST00000216727 FAM74A7A6NL05 159 aa24.26■■□□□ 1.47
PABPN1-201ENST00000216727 TAGLNQ01995 201 aaKnown RBP24.26■■□□□ 1.47
PABPN1-201ENST00000216727 FAM74A3Q4VXF1 159 aa24.26■■□□□ 1.47
PABPN1-201ENST00000216727 SLC35B3Q9H1N7 401 aa24.26■■□□□ 1.47
PABPN1-201ENST00000216727 TMEM41BQ5BJD5 291 aa24.25■■□□□ 1.47
PABPN1-201ENST00000216727 OR13D1Q8NGV5 346 aa24.25■■□□□ 1.47
PABPN1-201ENST00000216727 MBD3L1Q8WWY6 194 aa24.25■■□□□ 1.47
PABPN1-201ENST00000216727 AIFM2Q9BRQ8 373 aa24.25■■□□□ 1.47
PABPN1-201ENST00000216727 VSIRQ9H7M9 311 aa24.25■■□□□ 1.47
PABPN1-201ENST00000216727 HEYLQ9NQ87 328 aaPredicted RBP24.25■■□□□ 1.47
PABPN1-201ENST00000216727 RELNP78509 3460 aa24.25■■□□□ 1.47
PABPN1-201ENST00000216727 NUPL2O15504 423 aaKnown RBP24.25■■□□□ 1.47
PABPN1-201ENST00000216727 MDKP21741 143 aaPredicted RBP24.25■■□□□ 1.47
PABPN1-201ENST00000216727 TSPAN4O14817 238 aa24.24■■□□□ 1.47
PABPN1-201ENST00000216727 NPBWR1P48145 328 aa24.24■■□□□ 1.47
PABPN1-201ENST00000216727 HSPE1P61604 102 aaKnown RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms