RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 USF3Q68DE3 2245 aa16.02■□□□□ 0.15
MBD3-201ENST00000156825 TTC28Q96AY4 2481 aa16.02■□□□□ 0.15
MBD3-201ENST00000156825 OR9G1Q8NH87 305 aa16.02■□□□□ 0.15
MBD3-201ENST00000156825 NPIPB3Q92617 1050 aa16.02■□□□□ 0.15
MBD3-201ENST00000156825 NPIPB13A6NJU9 1138 aa16.02■□□□□ 0.15
MBD3-201ENST00000156825 NPIPB4C9JG80 1138 aa16.02■□□□□ 0.15
MBD3-201ENST00000156825 DLL1O00548 723 aa16.02■□□□□ 0.15
MBD3-201ENST00000156825 PSG7Q13046 419 aa16.02■□□□□ 0.15
MBD3-201ENST00000156825 PQLC2Q6ZP29 291 aa16.02■□□□□ 0.15
MBD3-201ENST00000156825 OR4B1Q8NGF8 309 aa16.02■□□□□ 0.15
MBD3-201ENST00000156825 MEGF10Q96KG7 1140 aa16.02■□□□□ 0.15
MBD3-201ENST00000156825 FREM3P0C091 2139 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 IGHV3-49A0A0A0MS15 119 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 C12orf77C9JDV5 145 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 CRXO43186 299 aaPredicted RBP16.01■□□□□ 0.15
MBD3-201ENST00000156825 CFHR1Q03591 330 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 ABLIM2Q6H8Q1 611 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 CORTO00230 105 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 ISLRO14498 428 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 TFF1P04155 84 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 TWIST1Q15672 202 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 FLVCR1-AS1Q8TAF5 88 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 NUDT16L1Q9BRJ7 211 aaKnown RBP16.01■□□□□ 0.15
MBD3-201ENST00000156825 C19orf35Q6ZS72 473 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 SAXO1Q8IYX7 474 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 QTRT1Q9BXR0 403 aaKnown RBP16.01■□□□□ 0.15
MBD3-201ENST00000156825 JPT1Q9UK76 154 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 NDUFA2O43678 99 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 MOSP00540 346 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 TRGC2P03986 189 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 ARL14EPLP0DKL9 152 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 GLRXP35754 106 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 PPOXP50336 477 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 TM4SF20Q53R12 229 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 ZNF738Q8NE65 137 aa16.01■□□□□ 0.15
MBD3-201ENST00000156825 ZNF430Q9H8G1 570 aaPredicted RBP16.01■□□□□ 0.15
MBD3-201ENST00000156825 RBBP6Q7Z6E9 1792 aaKnown RBP16■□□□□ 0.15
MBD3-201ENST00000156825 A0A0G2JK05 382 aa16■□□□□ 0.15
MBD3-201ENST00000156825 ZNF708P17019 499 aa16■□□□□ 0.15
MBD3-201ENST00000156825 C9orf106Q8NAJ2 232 aa16■□□□□ 0.15
MBD3-201ENST00000156825 RALYQ9UKM9 306 aaKnown RBP16■□□□□ 0.15
MBD3-201ENST00000156825 TMEM78Q5T7P6 136 aa16■□□□□ 0.15
MBD3-201ENST00000156825 MAP1LC3CQ9BXW4 147 aa16■□□□□ 0.15
MBD3-201ENST00000156825 DEPPQ9NTK1 212 aa16■□□□□ 0.15
MBD3-201ENST00000156825 KBTBD11O94819 623 aa16■□□□□ 0.15
MBD3-201ENST00000156825 IGHV1-2P23083 117 aa16■□□□□ 0.15
MBD3-201ENST00000156825 TIMM23BQ5SRD1 257 aa16■□□□□ 0.15
MBD3-201ENST00000156825 WDFY1Q8IWB7 410 aa16■□□□□ 0.15
MBD3-201ENST00000156825 IGHV3OR16-8A0A075B7F1 116 aa16■□□□□ 0.15
MBD3-201ENST00000156825 A0A087X0M5 115 aa16■□□□□ 0.15
MBD3-201ENST00000156825 A0A1B0GX30 115 aa16■□□□□ 0.15
MBD3-201ENST00000156825 BSPH1Q075Z2 132 aa16■□□□□ 0.15
MBD3-201ENST00000156825 IBA57Q5T440 356 aaKnown RBP16■□□□□ 0.15
MBD3-201ENST00000156825 OR4C13Q8NGP0 309 aa16■□□□□ 0.15
MBD3-201ENST00000156825 AQP10Q96PS8 301 aa16■□□□□ 0.15
MBD3-201ENST00000156825 CD74P04233 296 aa15.99■□□□□ 0.15
MBD3-201ENST00000156825 RPS11P62280 158 aaKnown RBP eCLIP15.99■□□□□ 0.15
MBD3-201ENST00000156825 IFITM2Q01629 132 aa15.99■□□□□ 0.15
MBD3-201ENST00000156825 KLRB1Q12918 225 aa15.99■□□□□ 0.15
MBD3-201ENST00000156825 LINC00470Q9BZP3 86 aa15.99■□□□□ 0.15
MBD3-201ENST00000156825 HSPB7Q9UBY9 170 aa15.99■□□□□ 0.15
MBD3-201ENST00000156825 IGHV3-23P01764 117 aa15.99■□□□□ 0.15
MBD3-201ENST00000156825 CRYBB3P26998 211 aa15.99■□□□□ 0.15
MBD3-201ENST00000156825 RND3P61587 244 aa15.99■□□□□ 0.15
MBD3-201ENST00000156825 CLEC7AQ9BXN2 247 aa15.99■□□□□ 0.15
MBD3-201ENST00000156825 MSGN1A6NI15 193 aa15.99■□□□□ 0.15
MBD3-201ENST00000156825 MPTX1A8MV57 137 aa15.99■□□□□ 0.15
MBD3-201ENST00000156825 J3QR89 54 aa15.99■□□□□ 0.15
MBD3-201ENST00000156825 NR2C2APQ86WQ0 139 aa15.99■□□□□ 0.15
MBD3-201ENST00000156825 LOC390937A0A1W2PQ73 354 aa15.99■□□□□ 0.15
MBD3-201ENST00000156825 SELENOTP62341 195 aa15.99■□□□□ 0.15
MBD3-201ENST00000156825 BPIFA4PQ86YQ2 179 aa15.99■□□□□ 0.15
MBD3-201ENST00000156825 MIOXQ9UGB7 285 aa15.99■□□□□ 0.15
MBD3-201ENST00000156825 RRHO14718 337 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 MPDU1O75352 247 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 LCN2P80188 198 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 C2orf68Q2NKX9 166 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 LINC00114Q6XXX2 140 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 OR13A1Q8NGR1 328 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 METTL26Q96S19 204 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 LIPFP07098 398 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 ZNF883P0CG24 379 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 ZNF383Q8NA42 475 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 DNAJC4Q9NNZ3 241 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 ELOA3CA0A087WX78 387 aaPredicted RBP15.98■□□□□ 0.15
MBD3-201ENST00000156825 TMEM189A5PLL7 270 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 SMAD7O15105 426 aaKnown RBP15.98■□□□□ 0.15
MBD3-201ENST00000156825 CEACAM1P13688 526 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 ID1P41134 155 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 ACP7Q6ZNF0 438 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 AP5S1Q9NUS5 200 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 PRR32B1ATL7 298 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 IGKV3-20P01619 116 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 KIAA1644Q3SXP7 199 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 FADS6Q8N9I5 356 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 TBX15Q96SF7 602 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 TMEM106BQ9NUM4 274 aa15.98■□□□□ 0.15
MBD3-201ENST00000156825 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.97■□□□□ 0.153e-9■■■□□ 16
MBD3-201ENST00000156825 LCTP09848 1927 aa15.97■□□□□ 0.15
MBD3-201ENST00000156825 A0A1B0GTI1 187 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms