RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 FTH1P19P0C7X4 201 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 TNFRSF9Q07011 255 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 SFTA2Q6UW10 78 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 SPNS3Q6ZMD2 512 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 CYSLTR1Q9Y271 337 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 COL11A2P13942 1736 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-201ENST00000011700 K7ESM1 405 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 PI3P19957 117 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 MNX1P50219 401 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-201ENST00000011700 MMDQ15546 238 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 C1orf100Q5SVJ3 147 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 MORN3Q6PF18 240 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-201ENST00000011700 LIMS2Q7Z4I7 341 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 CCL17Q92583 94 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 C5orf30Q96GV9 206 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 GNB1LQ9BYB4 327 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 TBL2Q9Y4P3 447 aaKnown RBP5.27□□□□□ -1.57
VPS13D-201ENST00000011700 NCOR2Q9Y618 2525 aa5.27□□□□□ -1.57
VPS13D-201ENST00000011700 TMEM238C9JI98 176 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 CD160O95971 181 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 ZNF688P0C7X2 276 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 EFNB2P52799 333 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 PLPPR1Q8TBJ4 325 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 TAF15Q92804 592 aaKnown RBP eCLIP5.26□□□□□ -1.57
VPS13D-201ENST00000011700 DUSP15Q9H1R2 295 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-201ENST00000011700 AUP1Q9Y679 476 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 NDUFS8O00217 210 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 SPRY1O43609 319 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-201ENST00000011700 MPZL1O95297 269 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 TMEM177Q53S58 311 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 OR10J3Q5JRS4 329 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 RHNO1Q9BSD3 238 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 PIMREGQ9BSJ6 248 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 WSB2Q9NYS7 404 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-201ENST00000011700 GDF9O60383 454 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 MUC1P15941 1255 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-201ENST00000011700 CD200R1LQ6Q8B3 271 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 MS4A6AQ9H2W1 248 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 CRPP02741 224 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 LGALS1P09382 135 aaKnown RBP5.26□□□□□ -1.57
VPS13D-201ENST00000011700 ATP6V0CP27449 155 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 KIAA0040Q15053 153 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 C1orf185Q5T7R7 199 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 MS4A4AQ96JQ5 239 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 RASL10BQ96S79 203 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 PIEZO1Q92508 2521 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 TTC28Q96AY4 2481 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 RND3P61587 244 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 C1QL4Q86Z23 238 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 VKORC1L1Q8N0U8 176 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 MRPL18Q9H0U6 180 aaKnown RBP5.26□□□□□ -1.57
VPS13D-201ENST00000011700 CARHSP1Q9Y2V2 147 aaKnown RBP5.26□□□□□ -1.57
VPS13D-201ENST00000011700 RPL27AP46776 148 aaKnown RBP5.26□□□□□ -1.57
VPS13D-201ENST00000011700 DEFB103AP81534 67 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 TMEM179BQ7Z7N9 219 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 LRRC75AQ8NAA5 344 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 TNFRSF14Q92956 283 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 FBXO17Q96EF6 278 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 MIXL1Q9H2W2 232 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 SDF2L1Q9HCN8 221 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 LHX9Q9NQ69 397 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 ST6GALNAC2Q9UJ37 374 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 GPR179Q6PRD1 2367 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-201ENST00000011700 CRXO43186 299 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-201ENST00000011700 KLK10O43240 276 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 NDUFS6O75380 124 aaKnown RBP5.26□□□□□ -1.57
VPS13D-201ENST00000011700 EMP1P54849 157 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 ACSF3Q4G176 576 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-201ENST00000011700 TTC9CQ8N5M4 171 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 WNT2BQ93097 391 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 RHOVQ96L33 236 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 SOSTQ9BQB4 213 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 WNT5BQ9H1J7 359 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-201ENST00000011700 HOXA5P20719 270 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 SRSF4Q08170 494 aaKnown RBP5.26□□□□□ -1.57
VPS13D-201ENST00000011700 TP53INP2Q8IXH6 220 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 OR10W1Q8NGF6 305 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 SLC50A1Q9BRV3 221 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 ETHE1O95571 254 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 RCC1P18754 421 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-201ENST00000011700 HSPE1P61604 102 aaKnown RBP5.26□□□□□ -1.57
VPS13D-201ENST00000011700 NHLRC3Q5JS37 347 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 HSPB9Q9BQS6 159 aa5.26□□□□□ -1.57
VPS13D-201ENST00000011700 POM121BA6NF01 834 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 B9A039 149 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 DXOO77932 396 aaKnown RBP5.25□□□□□ -1.57
VPS13D-201ENST00000011700 OR4D5Q8NGN0 318 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 DERL1Q9BUN8 251 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 IGHV1OR21-1A0A087WYE8 117 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 MPV17P39210 176 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 C2orf83Q53S99 150 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 MRPS18CQ9Y3D5 142 aaKnown RBP5.25□□□□□ -1.57
VPS13D-201ENST00000011700 MOSPD3O75425 235 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 PRSS53Q2L4Q9 553 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 OR10S1Q8NGN2 331 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 SPACA5Q96QH8 159 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 PPIAL4EA0A075B759 164 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 PPIAL4DF5H284 164 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms