RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 GRIK5Q16478 980 aa14.9□□□□□ -0.02
LINC00339-213ENST00000642137 NSUN4Q96CB9 384 aaKnown RBP14.9□□□□□ -0.02
LINC00339-213ENST00000642137 MAST3O60307 1309 aa14.9□□□□□ -0.02
LINC00339-213ENST00000642137 ZNF541Q9H0D2 1346 aa14.9□□□□□ -0.02
LINC00339-213ENST00000642137 RNF113AO15541 343 aaKnown RBP14.89□□□□□ -0.03
LINC00339-213ENST00000642137 ADD2P35612 726 aa14.89□□□□□ -0.03
LINC00339-213ENST00000642137 GSTO1P78417 241 aa14.89□□□□□ -0.03
LINC00339-213ENST00000642137 MECOMQ03112 1051 aa14.89□□□□□ -0.03
LINC00339-213ENST00000642137 UBE3CQ15386 1083 aa14.89□□□□□ -0.03
LINC00339-213ENST00000642137 SLC9C2Q5TAH2 1124 aa14.89□□□□□ -0.03
LINC00339-213ENST00000642137 SLF2Q8IX21 1173 aa14.89□□□□□ -0.03
LINC00339-213ENST00000642137 FAM163AQ96GL9 167 aaPredicted RBP14.89□□□□□ -0.03
LINC00339-213ENST00000642137 TTF2Q9UNY4 1162 aaKnown RBP14.89□□□□□ -0.03
LINC00339-213ENST00000642137 ZBTB12Q9Y330 459 aaPredicted RBP14.89□□□□□ -0.03
LINC00339-213ENST00000642137 GJA3Q9Y6H8 435 aa14.89□□□□□ -0.03
LINC00339-213ENST00000642137 MYH7P12883 1935 aa14.88□□□□□ -0.03
LINC00339-213ENST00000642137 RFX7Q2KHR2 1363 aa14.88□□□□□ -0.03
LINC00339-213ENST00000642137 GLTPD2A6NH11 291 aa14.88□□□□□ -0.03
LINC00339-213ENST00000642137 NAA16Q6N069 864 aaPredicted RBP14.88□□□□□ -0.03
LINC00339-213ENST00000642137 HHIPL2Q6UWX4 724 aa14.88□□□□□ -0.03
LINC00339-213ENST00000642137 DZIP1Q86YF9 867 aaKnown RBP14.88□□□□□ -0.03
LINC00339-213ENST00000642137 KIAA0825Q8IV33 1275 aa14.88□□□□□ -0.03
LINC00339-213ENST00000642137 MAGEB6Q8N7X4 407 aa14.88□□□□□ -0.03
LINC00339-213ENST00000642137 HDAC9Q9UKV0 1011 aa14.88□□□□□ -0.03
LINC00339-213ENST00000642137 TIAM2Q8IVF5 1701 aa14.88□□□□□ -0.03
LINC00339-213ENST00000642137 TCRBV5S4A2TA0A5A2 114 aa14.87□□□□□ -0.03
LINC00339-213ENST00000642137 F8W031 263 aaPredicted RBP14.87□□□□□ -0.03
LINC00339-213ENST00000642137 DDNO94850 711 aaPredicted RBP14.87□□□□□ -0.03
LINC00339-213ENST00000642137 USP17L8P0C7I0 530 aa14.87□□□□□ -0.03
LINC00339-213ENST00000642137 PDE6AP16499 860 aa14.87□□□□□ -0.03
LINC00339-213ENST00000642137 CHMLP26374 656 aa14.87□□□□□ -0.03
LINC00339-213ENST00000642137 OGFOD1Q8N543 542 aa14.87□□□□□ -0.03
LINC00339-213ENST00000642137 ZNF384Q8TF68 577 aa14.87□□□□□ -0.03
LINC00339-213ENST00000642137 ZNF532Q9HCE3 1301 aa14.87□□□□□ -0.03
LINC00339-213ENST00000642137 CYP7A1P22680 504 aa14.86□□□□□ -0.03
LINC00339-213ENST00000642137 GMPSP49915 693 aaPredicted RBP14.86□□□□□ -0.03
LINC00339-213ENST00000642137 ZMYM1Q5SVZ6 1142 aa14.86□□□□□ -0.03
LINC00339-213ENST00000642137 APPBP2Q92624 585 aa14.86□□□□□ -0.03
LINC00339-213ENST00000642137 HELLSQ9NRZ9 838 aa14.86□□□□□ -0.03
LINC00339-213ENST00000642137 CNOT7Q9UIV1 285 aaKnown RBP14.86□□□□□ -0.03
LINC00339-213ENST00000642137 SERPINA10Q9UK55 444 aa14.86□□□□□ -0.03
LINC00339-213ENST00000642137 MYH2Q9UKX2 1941 aa14.86□□□□□ -0.03
LINC00339-213ENST00000642137 H7C1D1 291 aa14.85□□□□□ -0.03
LINC00339-213ENST00000642137 CDC45O75419 566 aa14.85□□□□□ -0.03
LINC00339-213ENST00000642137 SCNN1DP51172 638 aa14.85□□□□□ -0.03
LINC00339-213ENST00000642137 ZNF280AP59817 542 aaPredicted RBP14.85□□□□□ -0.03
LINC00339-213ENST00000642137 MTMR14Q8NCE2 650 aa14.85□□□□□ -0.03
LINC00339-213ENST00000642137 RUFY2Q8WXA3 655 aa14.85□□□□□ -0.03
LINC00339-213ENST00000642137 TEKT1Q969V4 418 aa14.85□□□□□ -0.03
LINC00339-213ENST00000642137 L3MBTL3Q96JM7 780 aaPredicted RBP14.85□□□□□ -0.03
LINC00339-213ENST00000642137 DIAPH3Q9NSV4 1193 aa14.85□□□□□ -0.03
LINC00339-213ENST00000642137 GAKO14976 1311 aa14.85□□□□□ -0.03
LINC00339-213ENST00000642137 GPR75-ASB3A0A0A6YYF3 556 aa14.84□□□□□ -0.03
LINC00339-213ENST00000642137 CRKP46108 304 aa14.84□□□□□ -0.03
LINC00339-213ENST00000642137 PPP4CP60510 307 aa14.84□□□□□ -0.03
LINC00339-213ENST00000642137 NMIQ13287 307 aaPredicted RBP14.84□□□□□ -0.03
LINC00339-213ENST00000642137 DIXDC1Q155Q3 683 aa14.84□□□□□ -0.03
LINC00339-213ENST00000642137 MCMDC2Q4G0Z9 681 aa14.84□□□□□ -0.03
LINC00339-213ENST00000642137 CASC1Q6TDU7 716 aa14.84□□□□□ -0.03
LINC00339-213ENST00000642137 CERS3Q8IU89 383 aa14.84□□□□□ -0.03
LINC00339-213ENST00000642137 ZDHHC15Q96MV8 337 aa14.84□□□□□ -0.03
LINC00339-213ENST00000642137 GPRC5DQ9NZD1 345 aa14.84□□□□□ -0.03
LINC00339-213ENST00000642137 MROH7-TTC4A0A0A0MT08 1334 aa14.84□□□□□ -0.03
LINC00339-213ENST00000642137 BAG3O95817 575 aa14.83□□□□□ -0.04
LINC00339-213ENST00000642137 CHGBP05060 677 aa14.83□□□□□ -0.04
LINC00339-213ENST00000642137 CFAP100Q494V2 611 aa14.83□□□□□ -0.04
LINC00339-213ENST00000642137 SLFNL1Q499Z3 407 aa14.83□□□□□ -0.04
LINC00339-213ENST00000642137 CWC27Q6UX04 472 aaKnown RBP14.83□□□□□ -0.04
LINC00339-213ENST00000642137 MICALL2Q8IY33 904 aa14.83□□□□□ -0.04
LINC00339-213ENST00000642137 OSBP2Q969R2 916 aa14.83□□□□□ -0.04
LINC00339-213ENST00000642137 NOL10Q9BSC4 688 aaKnown RBP14.83□□□□□ -0.04
LINC00339-213ENST00000642137 PUS7LQ9H0K6 701 aaKnown RBP14.83□□□□□ -0.04
LINC00339-213ENST00000642137 DAGLAQ9Y4D2 1042 aa14.83□□□□□ -0.04
LINC00339-213ENST00000642137 MAST2Q6P0Q8 1798 aa14.83□□□□□ -0.04
LINC00339-213ENST00000642137 MAGEB6P1A0A0J9YX57 407 aa14.82□□□□□ -0.04
LINC00339-213ENST00000642137 LMOD1P29536 600 aaPredicted RBP14.82□□□□□ -0.04
LINC00339-213ENST00000642137 RBM5P52756 815 aaKnown RBP eCLIP14.82□□□□□ -0.04
LINC00339-213ENST00000642137 DLGAP5Q15398 846 aa14.82□□□□□ -0.04
LINC00339-213ENST00000642137 APOBEC3HQ6NTF7 200 aaKnown RBP14.82□□□□□ -0.04
LINC00339-213ENST00000642137 ADGRA1Q86SQ6 560 aa14.82□□□□□ -0.04
LINC00339-213ENST00000642137 ZBED3Q96IU2 234 aaPredicted RBP14.82□□□□□ -0.04
LINC00339-213ENST00000642137 FAM227BQ96M60 508 aa14.82□□□□□ -0.04
LINC00339-213ENST00000642137 SEC62Q99442 399 aaKnown RBP14.82□□□□□ -0.04
LINC00339-213ENST00000642137 MYOZ2Q9NPC6 264 aa14.82□□□□□ -0.04
LINC00339-213ENST00000642137 SRCAPQ6ZRS2 3230 aa14.81□□□□□ -0.04
LINC00339-213ENST00000642137 A0A0D9SFI3 127 aa14.81□□□□□ -0.04
LINC00339-213ENST00000642137 PLCG2P16885 1265 aa14.81□□□□□ -0.04
LINC00339-213ENST00000642137 EPS15P42566 896 aa14.81□□□□□ -0.04
LINC00339-213ENST00000642137 MFAP1P55081 439 aaKnown RBP14.81□□□□□ -0.04
LINC00339-213ENST00000642137 PRMT6Q96LA8 375 aaPredicted RBP14.81□□□□□ -0.04
LINC00339-213ENST00000642137 RIOK1Q9BRS2 568 aaKnown RBP14.81□□□□□ -0.04
LINC00339-213ENST00000642137 RAD50Q92878 1312 aa14.81□□□□□ -0.04
LINC00339-213ENST00000642137 GOLGB1Q14789 3259 aaKnown RBP14.81□□□□□ -0.04
LINC00339-213ENST00000642137 SHTN1A0MZ66 631 aa14.8□□□□□ -0.04
LINC00339-213ENST00000642137 IQCA1LA6NCM1 817 aa14.8□□□□□ -0.04
LINC00339-213ENST00000642137 SPDYE2BA6NHP3 402 aa14.8□□□□□ -0.04
LINC00339-213ENST00000642137 M0R2C6 588 aa14.8□□□□□ -0.04
LINC00339-213ENST00000642137 SGSM2O43147 1006 aa14.8□□□□□ -0.04
LINC00339-213ENST00000642137 EIF5BO60841 1220 aaKnown RBP14.8□□□□□ -0.04
LINC00339-213ENST00000642137 SPDYE6P0CI01 402 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms