RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 RRAGCQ9HB90 399 aa23.61■■□□□ 1.37
HLA-A-209ENST00000638375 LRP2BPQ9P2M1 347 aa23.61■■□□□ 1.37
HLA-A-209ENST00000638375 TTF1Q15361 905 aaPredicted RBP23.6■■□□□ 1.37
HLA-A-209ENST00000638375 RAI14Q9P0K7 980 aa23.6■■□□□ 1.37
HLA-A-209ENST00000638375 IQCA1LA6NCM1 817 aa23.59■■□□□ 1.37
HLA-A-209ENST00000638375 H7C1D1 291 aa23.59■■□□□ 1.37
HLA-A-209ENST00000638375 EGFRP00533 1210 aa23.59■■□□□ 1.37
HLA-A-209ENST00000638375 MECOMQ03112 1051 aa23.59■■□□□ 1.37
HLA-A-209ENST00000638375 DIXDC1Q155Q3 683 aa23.59■■□□□ 1.37
HLA-A-209ENST00000638375 SAMD7Q7Z3H4 446 aa23.59■■□□□ 1.37
HLA-A-209ENST00000638375 OGFOD1Q8N543 542 aa23.59■■□□□ 1.37
HLA-A-209ENST00000638375 TRPM4Q8TD43 1214 aa23.59■■□□□ 1.37
HLA-A-209ENST00000638375 NSUN4Q96CB9 384 aaKnown RBP23.59■■□□□ 1.37
HLA-A-209ENST00000638375 TAF1DQ9H5J8 278 aaPredicted RBP23.59■■□□□ 1.37
HLA-A-209ENST00000638375 HDAC9Q9UKV0 1011 aa23.59■■□□□ 1.37
HLA-A-209ENST00000638375 PCDHAC2Q9Y5I4 1007 aa23.59■■□□□ 1.37
HLA-A-209ENST00000638375 SCN4AP35499 1836 aa23.59■■□□□ 1.37
HLA-A-209ENST00000638375 DOCK2Q92608 1830 aa23.59■■□□□ 1.37
HLA-A-209ENST00000638375 MAST3O60307 1309 aa23.59■■□□□ 1.37
HLA-A-209ENST00000638375 MYO5AQ9Y4I1 1855 aaKnown RBP23.58■■□□□ 1.37
HLA-A-209ENST00000638375 IDH1O75874 414 aaKnown RBP23.58■■□□□ 1.37
HLA-A-209ENST00000638375 EPHX2P34913 555 aa23.58■■□□□ 1.37
HLA-A-209ENST00000638375 DZIP1Q86YF9 867 aaKnown RBP23.58■■□□□ 1.37
HLA-A-209ENST00000638375 MYOZ2Q9NPC6 264 aa23.58■■□□□ 1.37
HLA-A-209ENST00000638375 ADAMTSL1Q8N6G6 1762 aa23.57■■□□□ 1.36
HLA-A-209ENST00000638375 VEGFAP15692 232 aaPredicted RBP23.57■■□□□ 1.36
HLA-A-209ENST00000638375 CRKP46108 304 aa23.57■■□□□ 1.36
HLA-A-209ENST00000638375 MMP14P50281 582 aa23.57■■□□□ 1.36
HLA-A-209ENST00000638375 HDLBPQ00341 1268 aaKnown RBP23.57■■□□□ 1.36
HLA-A-209ENST00000638375 TBC1D10BQ4KMP7 808 aaPredicted RBP23.57■■□□□ 1.36
HLA-A-209ENST00000638375 TTC22Q5TAA0 569 aa23.57■■□□□ 1.36
HLA-A-209ENST00000638375 GPBP1L1Q9HC44 474 aaPredicted RBP23.57■■□□□ 1.36
HLA-A-209ENST00000638375 ADARB2Q9NS39 739 aaKnown RBP23.57■■□□□ 1.36
HLA-A-209ENST00000638375 SERPINA10Q9UK55 444 aa23.57■■□□□ 1.36
HLA-A-209ENST00000638375 MAST2Q6P0Q8 1798 aa23.56■■□□□ 1.36
HLA-A-209ENST00000638375 GSPT1P15170 499 aaKnown RBP23.56■■□□□ 1.36
HLA-A-209ENST00000638375 RGS3P49796 1198 aa23.56■■□□□ 1.36
HLA-A-209ENST00000638375 HIRAP54198 1017 aaPredicted RBP23.56■■□□□ 1.36
HLA-A-209ENST00000638375 KIF4BQ2VIQ3 1234 aa23.56■■□□□ 1.36
HLA-A-209ENST00000638375 CFAP100Q494V2 611 aa23.56■■□□□ 1.36
HLA-A-209ENST00000638375 RBM26Q5T8P6 1007 aaKnown RBP23.56■■□□□ 1.36
HLA-A-209ENST00000638375 KBTBD3Q8NAB2 608 aa23.56■■□□□ 1.36
HLA-A-209ENST00000638375 ZNF784Q8NCA9 323 aaPredicted RBP23.56■■□□□ 1.36
HLA-A-209ENST00000638375 ZBED3Q96IU2 234 aaPredicted RBP23.56■■□□□ 1.36
HLA-A-209ENST00000638375 MRIQ9BWK5 157 aa23.56■■□□□ 1.36
HLA-A-209ENST00000638375 MAP3K12Q12852 859 aa23.55■■□□□ 1.36
HLA-A-209ENST00000638375 HHIPL2Q6UWX4 724 aa23.55■■□□□ 1.36
HLA-A-209ENST00000638375 MTMR14Q8NCE2 650 aa23.55■■□□□ 1.36
HLA-A-209ENST00000638375 TEKT1Q969V4 418 aa23.55■■□□□ 1.36
HLA-A-209ENST00000638375 DAGLAQ9Y4D2 1042 aa23.55■■□□□ 1.36
HLA-A-209ENST00000638375 IGSF3O75054 1194 aa23.54■■□□□ 1.36
HLA-A-209ENST00000638375 MAGEB6Q8N7X4 407 aa23.54■■□□□ 1.36
HLA-A-209ENST00000638375 GAKO14976 1311 aa23.54■■□□□ 1.36
HLA-A-209ENST00000638375 CHGBP05060 677 aa23.53■■□□□ 1.36
HLA-A-209ENST00000638375 PDE6AP16499 860 aa23.53■■□□□ 1.36
HLA-A-209ENST00000638375 RBM5P52756 815 aaKnown RBP eCLIP23.53■■□□□ 1.36
HLA-A-209ENST00000638375 DLGAP5Q15398 846 aa23.53■■□□□ 1.36
HLA-A-209ENST00000638375 NAA16Q6N069 864 aaPredicted RBP23.53■■□□□ 1.36
HLA-A-209ENST00000638375 USP50Q70EL3 339 aaPredicted RBP23.53■■□□□ 1.36
HLA-A-209ENST00000638375 ADGRA1Q86SQ6 560 aa23.53■■□□□ 1.36
HLA-A-209ENST00000638375 EVI5LQ96CN4 794 aa23.53■■□□□ 1.36
HLA-A-209ENST00000638375 MROH7-TTC4A0A0A0MT08 1334 aa23.53■■□□□ 1.36
HLA-A-209ENST00000638375 SPDYE2BA6NHP3 402 aa23.52■■□□□ 1.36
HLA-A-209ENST00000638375 TRIM6-TRIM34B2RNG4 842 aa23.52■■□□□ 1.36
HLA-A-209ENST00000638375 WNT10BO00744 389 aa23.52■■□□□ 1.36
HLA-A-209ENST00000638375 SPDYE6P0CI01 402 aa23.52■■□□□ 1.36
HLA-A-209ENST00000638375 GSTO1P78417 241 aa23.52■■□□□ 1.36
HLA-A-209ENST00000638375 NBPF9Q3BBW0 867 aa23.52■■□□□ 1.36
HLA-A-209ENST00000638375 SLFNL1Q499Z3 407 aa23.52■■□□□ 1.36
HLA-A-209ENST00000638375 SLC9C2Q5TAH2 1124 aa23.52■■□□□ 1.36
HLA-A-209ENST00000638375 APOBEC3HQ6NTF7 200 aaKnown RBP23.52■■□□□ 1.36
HLA-A-209ENST00000638375 FAM163AQ96GL9 167 aaPredicted RBP23.52■■□□□ 1.36
HLA-A-209ENST00000638375 PRMT6Q96LA8 375 aaPredicted RBP23.52■■□□□ 1.36
HLA-A-209ENST00000638375 ZDHHC15Q96MV8 337 aa23.52■■□□□ 1.36
HLA-A-209ENST00000638375 TCRBV5S4A2TA0A5A2 114 aa23.51■■□□□ 1.35
HLA-A-209ENST00000638375 KIF3CO14782 793 aa23.51■■□□□ 1.35
HLA-A-209ENST00000638375 POTEIP0CG38 1075 aa23.51■■□□□ 1.35
HLA-A-209ENST00000638375 POTEJP0CG39 1038 aa23.51■■□□□ 1.35
HLA-A-209ENST00000638375 CYP7A1P22680 504 aa23.51■■□□□ 1.35
HLA-A-209ENST00000638375 ADD2P35612 726 aa23.51■■□□□ 1.35
HLA-A-209ENST00000638375 EAPPQ56P03 285 aaPredicted RBP23.51■■□□□ 1.35
HLA-A-209ENST00000638375 SLF2Q8IX21 1173 aa23.51■■□□□ 1.35
HLA-A-209ENST00000638375 CNTROBQ8N137 903 aa23.51■■□□□ 1.35
HLA-A-209ENST00000638375 FSD1Q9BTV5 496 aa23.51■■□□□ 1.35
HLA-A-209ENST00000638375 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.51■■□□□ 1.35
HLA-A-209ENST00000638375 ASTN2O75129 1339 aaPredicted RBP23.51■■□□□ 1.35
HLA-A-209ENST00000638375 LDHCP07864 332 aa23.5■■□□□ 1.35
HLA-A-209ENST00000638375 PNMA8AQ86V59 439 aaPredicted RBP23.5■■□□□ 1.35
HLA-A-209ENST00000638375 RILPL2Q969X0 211 aa23.5■■□□□ 1.35
HLA-A-209ENST00000638375 MYH2Q9UKX2 1941 aa23.5■■□□□ 1.35
HLA-A-209ENST00000638375 ZNF532Q9HCE3 1301 aa23.5■■□□□ 1.35
HLA-A-209ENST00000638375 SDSP20132 328 aa23.49■■□□□ 1.35
HLA-A-209ENST00000638375 GPR75-ASB3A0A0A6YYF3 556 aa23.48■■□□□ 1.35
HLA-A-209ENST00000638375 BTDP43251 543 aa23.48■■□□□ 1.35
HLA-A-209ENST00000638375 UBE3CQ15386 1083 aa23.48■■□□□ 1.35
HLA-A-209ENST00000638375 ZSCAN25Q6NSZ9 544 aa23.48■■□□□ 1.35
HLA-A-209ENST00000638375 TMED8Q6PL24 325 aaPredicted RBP23.48■■□□□ 1.35
HLA-A-209ENST00000638375 RNF113AO15541 343 aaKnown RBP23.47■■□□□ 1.35
HLA-A-209ENST00000638375 TDRD3Q9H7E2 651 aaKnown RBP23.47■■□□□ 1.35
HLA-A-209ENST00000638375 MYH7P12883 1935 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms