RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 WDR66Q8TBY9 1149 aa15.41■□□□□ 0.06
CLN6-225ENST00000638144 EAF2Q96CJ1 260 aaPredicted RBP15.41■□□□□ 0.06
CLN6-225ENST00000638144 SNRKQ9NRH2 765 aa15.41■□□□□ 0.06
CLN6-225ENST00000638144 DBNLQ9UJU6 430 aaKnown RBP15.41■□□□□ 0.06
CLN6-225ENST00000638144 MYO5AQ9Y4I1 1855 aaKnown RBP15.41■□□□□ 0.06
CLN6-225ENST00000638144 AKAP11Q9UKA4 1901 aa15.41■□□□□ 0.06
CLN6-225ENST00000638144 MYH2Q9UKX2 1941 aa15.41■□□□□ 0.06
CLN6-225ENST00000638144 PITPNM2Q9BZ72 1349 aa15.41■□□□□ 0.06
CLN6-225ENST00000638144 CNTNAP1P78357 1384 aa15.4■□□□□ 0.06
CLN6-225ENST00000638144 MCAMP43121 646 aa15.4■□□□□ 0.06
CLN6-225ENST00000638144 CACNB3P54284 484 aa15.4■□□□□ 0.06
CLN6-225ENST00000638144 TBC1D9Q6ZT07 1266 aa15.4■□□□□ 0.06
CLN6-225ENST00000638144 AACSQ86V21 672 aa15.4■□□□□ 0.06
CLN6-225ENST00000638144 MTMR14Q8NCE2 650 aa15.4■□□□□ 0.06
CLN6-225ENST00000638144 RHPN1Q8TCX5 695 aa15.4■□□□□ 0.06
CLN6-225ENST00000638144 TDRD3Q9H7E2 651 aaKnown RBP15.4■□□□□ 0.06
CLN6-225ENST00000638144 GPR108Q9NPR9 543 aa15.4■□□□□ 0.06
CLN6-225ENST00000638144 HMG20BQ9P0W2 317 aa15.4■□□□□ 0.06
CLN6-225ENST00000638144 ABCF2Q9UG63 623 aa15.4■□□□□ 0.06
CLN6-225ENST00000638144 SERPINA10Q9UK55 444 aa15.4■□□□□ 0.06
CLN6-225ENST00000638144 SEMA3EO15041 775 aa15.39■□□□□ 0.05
CLN6-225ENST00000638144 LDHBP07195 334 aaKnown RBP15.39■□□□□ 0.05
CLN6-225ENST00000638144 ARID4AP29374 1257 aaPredicted RBP15.39■□□□□ 0.05
CLN6-225ENST00000638144 TTC39AQ5SRH9 613 aa15.39■□□□□ 0.05
CLN6-225ENST00000638144 MOB2Q70IA6 237 aa15.39■□□□□ 0.05
CLN6-225ENST00000638144 TEKT1Q969V4 418 aa15.39■□□□□ 0.05
CLN6-225ENST00000638144 ZNF70Q9UC06 446 aaPredicted RBP15.39■□□□□ 0.05
CLN6-225ENST00000638144 PCDHB15Q9Y5E8 787 aa15.39■□□□□ 0.05
CLN6-225ENST00000638144 MYO1BO43795 1136 aa15.38■□□□□ 0.05
CLN6-225ENST00000638144 VEGFBP49765 207 aa15.38■□□□□ 0.05
CLN6-225ENST00000638144 MMP14P50281 582 aa15.38■□□□□ 0.05
CLN6-225ENST00000638144 SPDYE2Q495Y8 402 aa15.38■□□□□ 0.05
CLN6-225ENST00000638144 ERC1Q8IUD2 1116 aa15.38■□□□□ 0.05
CLN6-225ENST00000638144 APOBEC3FQ8IUX4 373 aaKnown RBP15.38■□□□□ 0.05
CLN6-225ENST00000638144 SPATA5Q8NB90 893 aa15.38■□□□□ 0.05
CLN6-225ENST00000638144 GBA2Q9HCG7 927 aaPredicted RBP15.38■□□□□ 0.05
CLN6-225ENST00000638144 FZD1Q9UP38 647 aa15.38■□□□□ 0.05
CLN6-225ENST00000638144 SUPT16HQ9Y5B9 1047 aaKnown RBP15.38■□□□□ 0.05
CLN6-225ENST00000638144 TLL2Q9Y6L7 1015 aa15.38■□□□□ 0.05
CLN6-225ENST00000638144 NDUFB9Q9Y6M9 179 aa15.38■□□□□ 0.05
CLN6-225ENST00000638144 SALL1Q9NSC2 1324 aa15.38■□□□□ 0.05
CLN6-225ENST00000638144 RASSF10A6NK89 507 aa15.37■□□□□ 0.05
CLN6-225ENST00000638144 TCP10L2B9ZVM9 353 aa15.37■□□□□ 0.05
CLN6-225ENST00000638144 SMARCA5O60264 1052 aaPredicted RBP15.37■□□□□ 0.05
CLN6-225ENST00000638144 PRKG1Q13976 671 aa15.37■□□□□ 0.05
CLN6-225ENST00000638144 HSP90AB4PQ58FF6 505 aa15.37■□□□□ 0.05
CLN6-225ENST00000638144 CYP4F22Q6NT55 531 aa15.37■□□□□ 0.05
CLN6-225ENST00000638144 SAPCD2Q86UD0 394 aa15.37■□□□□ 0.05
CLN6-225ENST00000638144 CDAN1Q8IWY9 1227 aa15.37■□□□□ 0.05
CLN6-225ENST00000638144 DAGLAQ9Y4D2 1042 aa15.37■□□□□ 0.05
CLN6-225ENST00000638144 MAST3O60307 1309 aa15.37■□□□□ 0.05
CLN6-225ENST00000638144 SSC5DA1L4H1 1573 aa15.36■□□□□ 0.05
CLN6-225ENST00000638144 PAPPA2Q9BXP8 1791 aa15.36■□□□□ 0.05
CLN6-225ENST00000638144 UQCRFS1P1P0C7P4 283 aa15.36■□□□□ 0.05
CLN6-225ENST00000638144 HUNKP57058 714 aa15.36■□□□□ 0.05
CLN6-225ENST00000638144 IRX6P78412 446 aaPredicted RBP15.36■□□□□ 0.05
CLN6-225ENST00000638144 DEFB115Q30KQ5 88 aa15.36■□□□□ 0.05
CLN6-225ENST00000638144 CCDC158Q5M9N0 1113 aa15.36■□□□□ 0.05
CLN6-225ENST00000638144 APOBEC3HQ6NTF7 200 aaKnown RBP15.36■□□□□ 0.05
CLN6-225ENST00000638144 DZIP1Q86YF9 867 aaKnown RBP15.36■□□□□ 0.05
CLN6-225ENST00000638144 KIF1BPQ96EK5 621 aa15.36■□□□□ 0.05
CLN6-225ENST00000638144 DEFB129Q9H1M3 183 aa15.36■□□□□ 0.05
CLN6-225ENST00000638144 SUGT1Q9Y2Z0 365 aa15.36■□□□□ 0.05
CLN6-225ENST00000638144 PDS5AQ29RF7 1337 aaKnown RBP15.36■□□□□ 0.05
CLN6-225ENST00000638144 MAST2Q6P0Q8 1798 aa15.36■□□□□ 0.05
CLN6-225ENST00000638144 HDLBPQ00341 1268 aaKnown RBP15.35■□□□□ 0.05
CLN6-225ENST00000638144 TTLL12Q14166 644 aaPredicted RBP15.35■□□□□ 0.05
CLN6-225ENST00000638144 C2orf69Q8N8R5 385 aa15.35■□□□□ 0.05
CLN6-225ENST00000638144 ZNF384Q8TF68 577 aa15.35■□□□□ 0.05
CLN6-225ENST00000638144 ZDHHC15Q96MV8 337 aa15.35■□□□□ 0.05
CLN6-225ENST00000638144 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.35■□□□□ 0.05
CLN6-225ENST00000638144 ZAP70P43403 619 aa15.34■□□□□ 0.05
CLN6-225ENST00000638144 MECOMQ03112 1051 aa15.34■□□□□ 0.05
CLN6-225ENST00000638144 RASA3Q14644 834 aa15.34■□□□□ 0.05
CLN6-225ENST00000638144 HHIPL2Q6UWX4 724 aa15.34■□□□□ 0.05
CLN6-225ENST00000638144 ERICH6Q7L0X2 663 aa15.34■□□□□ 0.05
CLN6-225ENST00000638144 ZGPATQ8N5A5 531 aaKnown RBP15.34■□□□□ 0.05
CLN6-225ENST00000638144 EXOC6Q8TAG9 804 aa15.34■□□□□ 0.05
CLN6-225ENST00000638144 CAPNS2Q96L46 248 aa15.34■□□□□ 0.05
CLN6-225ENST00000638144 PIH1D3Q9NQM4 214 aaKnown RBP15.34■□□□□ 0.05
CLN6-225ENST00000638144 RAI14Q9P0K7 980 aa15.34■□□□□ 0.05
CLN6-225ENST00000638144 UBE2Q2LH0YL09 131 aa15.33■□□□□ 0.04
CLN6-225ENST00000638144 AOC2O75106 756 aa15.33■□□□□ 0.04
CLN6-225ENST00000638144 RAB11FIP3O75154 756 aa15.33■□□□□ 0.04
CLN6-225ENST00000638144 CYP2E1P05181 493 aaPredicted RBP15.33■□□□□ 0.04
CLN6-225ENST00000638144 IFIT2P09913 472 aaKnown RBP15.33■□□□□ 0.04
CLN6-225ENST00000638144 NBPF12Q5TAG4 269 aaPredicted RBP15.33■□□□□ 0.04
CLN6-225ENST00000638144 CLASRPQ8N2M8 674 aaKnown RBP15.33■□□□□ 0.04
CLN6-225ENST00000638144 TMEM39BQ9GZU3 492 aa15.33■□□□□ 0.04
CLN6-225ENST00000638144 WDR33Q9C0J8 1336 aaKnown RBP15.33■□□□□ 0.04
CLN6-225ENST00000638144 AK9Q5TCS8 1911 aa15.33■□□□□ 0.04
CLN6-225ENST00000638144 OTOFQ9HC10 1997 aa15.33■□□□□ 0.04
CLN6-225ENST00000638144 THSD7BQ9C0I4 1608 aa15.32■□□□□ 0.04
CLN6-225ENST00000638144 NF2P35240 595 aa15.32■□□□□ 0.04
CLN6-225ENST00000638144 SPTY2D1Q68D10 685 aaPredicted RBP15.32■□□□□ 0.04
CLN6-225ENST00000638144 CDC42EP5Q6NZY7 148 aa15.32■□□□□ 0.04
CLN6-225ENST00000638144 JMYQ8N9B5 988 aa15.32■□□□□ 0.04
CLN6-225ENST00000638144 LRRCC1Q9C099 1032 aa15.32■□□□□ 0.04
CLN6-225ENST00000638144 LRP2BPQ9P2M1 347 aa15.32■□□□□ 0.04
CLN6-225ENST00000638144 DOCK2Q92608 1830 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms