RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 TACC3Q9Y6A5 838 aa9.32□□□□□ -0.92
GABRB3-225ENST00000638099 KLF18A0A0U1RQI7 1052 aa9.31□□□□□ -0.92
GABRB3-225ENST00000638099 PTPDC1A2A3K4 754 aa9.31□□□□□ -0.92
GABRB3-225ENST00000638099 H3BQV1 296 aa9.31□□□□□ -0.92
GABRB3-225ENST00000638099 TRIM37O94972 964 aa9.31□□□□□ -0.92
GABRB3-225ENST00000638099 UQCRFS1P1P0C7P4 283 aa9.31□□□□□ -0.92
GABRB3-225ENST00000638099 RFC4P35249 363 aa9.31□□□□□ -0.92
GABRB3-225ENST00000638099 NASPP49321 788 aaPredicted RBP9.31□□□□□ -0.92
GABRB3-225ENST00000638099 EVX2Q03828 476 aa9.31□□□□□ -0.92
GABRB3-225ENST00000638099 IFFO2Q5TF58 517 aa9.31□□□□□ -0.92
GABRB3-225ENST00000638099 CLEC4GQ6UXB4 293 aa9.31□□□□□ -0.92
GABRB3-225ENST00000638099 RALYLQ86SE5 291 aaKnown RBP9.31□□□□□ -0.92
GABRB3-225ENST00000638099 TTC6Q86TZ1 520 aa9.31□□□□□ -0.92
GABRB3-225ENST00000638099 TXNRD3Q86VQ6 643 aa9.31□□□□□ -0.92
GABRB3-225ENST00000638099 VPS37DQ86XT2 251 aa9.31□□□□□ -0.92
GABRB3-225ENST00000638099 FAM184AQ8NB25 1140 aa9.31□□□□□ -0.92
GABRB3-225ENST00000638099 NSUN7Q8NE18 718 aaKnown RBP9.31□□□□□ -0.92
GABRB3-225ENST00000638099 CDC5LQ99459 802 aaKnown RBP9.31□□□□□ -0.92
GABRB3-225ENST00000638099 NEDD4P46934 1319 aa9.31□□□□□ -0.92
GABRB3-225ENST00000638099 CHAF1AQ13111 956 aaPredicted RBP9.31□□□□□ -0.92
GABRB3-225ENST00000638099 TTF1Q15361 905 aaPredicted RBP9.31□□□□□ -0.92
GABRB3-225ENST00000638099 LRRFIP1Q32MZ4 808 aaKnown RBP9.31□□□□□ -0.92
GABRB3-225ENST00000638099 STRBPQ96SI9 672 aaKnown RBP9.31□□□□□ -0.92
GABRB3-225ENST00000638099 QTRT2Q9H974 415 aaKnown RBP9.31□□□□□ -0.92
GABRB3-225ENST00000638099 RAI14Q9P0K7 980 aa9.31□□□□□ -0.92
GABRB3-225ENST00000638099 CNTNAP4Q9C0A0 1308 aa9.31□□□□□ -0.92
GABRB3-225ENST00000638099 CYP2D7A0A087X1C5 515 aa9.3□□□□□ -0.92
GABRB3-225ENST00000638099 GOLGA8BA8MQT2 603 aa9.3□□□□□ -0.92
GABRB3-225ENST00000638099 UBE2Q2LH0YL09 131 aa9.3□□□□□ -0.92
GABRB3-225ENST00000638099 PFKFB2O60825 505 aa9.3□□□□□ -0.92
GABRB3-225ENST00000638099 DYNLL1P63167 89 aaKnown RBP9.3□□□□□ -0.92
GABRB3-225ENST00000638099 MAP3K12Q12852 859 aa9.3□□□□□ -0.92
GABRB3-225ENST00000638099 GLIPR1L2Q4G1C9 344 aa9.3□□□□□ -0.92
GABRB3-225ENST00000638099 MB21D2Q8IYB1 491 aaPredicted RBP9.3□□□□□ -0.92
GABRB3-225ENST00000638099 MPNDQ8N594 471 aa9.3□□□□□ -0.92
GABRB3-225ENST00000638099 AK7Q96M32 723 aa9.3□□□□□ -0.92
GABRB3-225ENST00000638099 ALDH8A1Q9H2A2 487 aaPredicted RBP9.3□□□□□ -0.92
GABRB3-225ENST00000638099 CTNNA3Q9UI47 895 aa9.3□□□□□ -0.92
GABRB3-225ENST00000638099 CASZ1Q86V15 1759 aa9.3□□□□□ -0.92
GABRB3-225ENST00000638099 RREB1Q92766 1687 aa9.3□□□□□ -0.92
GABRB3-225ENST00000638099 CAMK4Q16566 473 aa9.3□□□□□ -0.92
GABRB3-225ENST00000638099 AIFM3Q96NN9 605 aa9.3□□□□□ -0.92
GABRB3-225ENST00000638099 NLRP3Q96P20 1036 aa9.3□□□□□ -0.92
GABRB3-225ENST00000638099 SLC4A4Q9Y6R1 1079 aa9.3□□□□□ -0.92
GABRB3-225ENST00000638099 COL1A1P02452 1464 aaPredicted RBP9.3□□□□□ -0.92
GABRB3-225ENST00000638099 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.29□□□□□ -0.92
GABRB3-225ENST00000638099 MBD3O95983 291 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 HMGB1P09429 215 aaKnown RBP9.29□□□□□ -0.92
GABRB3-225ENST00000638099 CYP7A1P22680 504 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 ZNF445P59923 1031 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 UBE3CQ15386 1083 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 ZSCAN25Q6NSZ9 544 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 GIMAP6Q6P9H5 292 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 IFNL3Q8IZI9 196 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 NCOA7Q8NI08 942 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 CHMP4CQ96CF2 233 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 NAPBQ9H115 298 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 BCORQ6W2J9 1755 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 LRP5O75197 1615 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 SPATA31A6Q5VVP1 1343 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 UTRNP46939 3433 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 MINDY4BA8MYZ0 360 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 MCM5P33992 734 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 ADD1P35611 737 aaKnown RBP9.29□□□□□ -0.92
GABRB3-225ENST00000638099 RPS8P62241 208 aaKnown RBP9.29□□□□□ -0.92
GABRB3-225ENST00000638099 NFIXQ14938 502 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 TRAPPC3LQ5T215 181 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 MICU3Q86XE3 530 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 CCDC82Q8N4S0 544 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 ZNF512BQ96KM6 892 aaPredicted RBP9.29□□□□□ -0.92
GABRB3-225ENST00000638099 FAM84BQ96KN1 310 aaPredicted RBP9.29□□□□□ -0.92
GABRB3-225ENST00000638099 GSG1L2A8MUP6 293 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 FDPSP14324 419 aaKnown RBP9.29□□□□□ -0.92
GABRB3-225ENST00000638099 LIG1P18858 919 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 TDO2P48775 406 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 SF3B3Q15393 1217 aaKnown RBP9.29□□□□□ -0.92
GABRB3-225ENST00000638099 LRSAM1Q6UWE0 723 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 CMTR1Q8N1G2 835 aaKnown RBP9.29□□□□□ -0.92
GABRB3-225ENST00000638099 RRAGDQ9NQL2 400 aaPredicted RBP9.29□□□□□ -0.92
GABRB3-225ENST00000638099 BSDC1Q9NW68 430 aaPredicted RBP9.29□□□□□ -0.92
GABRB3-225ENST00000638099 HPS5Q9UPZ3 1129 aa9.29□□□□□ -0.92
GABRB3-225ENST00000638099 TPTE2Q6XPS3 522 aa9.28□□□□□ -0.92
GABRB3-225ENST00000638099 ZNF384Q8TF68 577 aa9.28□□□□□ -0.92
GABRB3-225ENST00000638099 PHKBQ93100 1093 aa9.28□□□□□ -0.92
GABRB3-225ENST00000638099 ATP6V1DQ9Y5K8 247 aa9.28□□□□□ -0.92
GABRB3-225ENST00000638099 LAMB2P55268 1798 aa9.28□□□□□ -0.92
GABRB3-225ENST00000638099 PRDM1O75626 825 aa9.28□□□□□ -0.92
GABRB3-225ENST00000638099 PDCP20941 246 aa9.28□□□□□ -0.92
GABRB3-225ENST00000638099 UBE2HP62256 183 aa9.28□□□□□ -0.92
GABRB3-225ENST00000638099 KRT85P78386 507 aa9.28□□□□□ -0.92
GABRB3-225ENST00000638099 TRDNQ13061 729 aa9.28□□□□□ -0.92
GABRB3-225ENST00000638099 SPATA32Q96LK8 384 aa9.28□□□□□ -0.92
GABRB3-225ENST00000638099 AGXT2Q9BYV1 514 aa9.28□□□□□ -0.92
GABRB3-225ENST00000638099 POLR3DP05423 398 aaPredicted RBP9.27□□□□□ -0.93
GABRB3-225ENST00000638099 PRDX5P30044 214 aa9.27□□□□□ -0.93
GABRB3-225ENST00000638099 RESTQ13127 1097 aa9.27□□□□□ -0.93
GABRB3-225ENST00000638099 NFXL1Q6ZNB6 911 aa9.27□□□□□ -0.93
GABRB3-225ENST00000638099 SMARCC2Q8TAQ2 1214 aa9.27□□□□□ -0.93
GABRB3-225ENST00000638099 ZSWIM5Q9P217 1185 aa9.27□□□□□ -0.93
GABRB3-225ENST00000638099 ANKIB1Q9P2G1 1089 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms