RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 EBAG9O00559 213 aa9.06□□□□□ -0.96
CDKL5-211ENST00000637881 PPFIA2O75334 1257 aa9.06□□□□□ -0.96
CDKL5-211ENST00000637881 INPP5BP32019 993 aa9.06□□□□□ -0.96
CDKL5-211ENST00000637881 ZNF165P49910 485 aa9.06□□□□□ -0.96
CDKL5-211ENST00000637881 CCDC96Q2M329 555 aa9.06□□□□□ -0.96
CDKL5-211ENST00000637881 CWC27Q6UX04 472 aaKnown RBP9.06□□□□□ -0.96
CDKL5-211ENST00000637881 UNC5CLQ8IV45 518 aa9.06□□□□□ -0.96
CDKL5-211ENST00000637881 ZKSCAN4Q969J2 545 aaPredicted RBP9.06□□□□□ -0.96
CDKL5-211ENST00000637881 QTRT2Q9H974 415 aaKnown RBP9.06□□□□□ -0.96
CDKL5-211ENST00000637881 VIPAS39Q9H9C1 493 aa9.06□□□□□ -0.96
CDKL5-211ENST00000637881 SLC24A3Q9HC58 644 aa9.06□□□□□ -0.96
CDKL5-211ENST00000637881 TRMT1Q9NXH9 659 aaKnown RBP9.06□□□□□ -0.96
CDKL5-211ENST00000637881 RGS17Q9UGC6 210 aaPredicted RBP9.06□□□□□ -0.96
CDKL5-211ENST00000637881 RAB21Q9UL25 225 aa9.06□□□□□ -0.96
CDKL5-211ENST00000637881 MARF1Q9Y4F3 1742 aaKnown RBP9.05□□□□□ -0.96
CDKL5-211ENST00000637881 PHRF1Q9P1Y6 1649 aaKnown RBP9.05□□□□□ -0.96
CDKL5-211ENST00000637881 ZBTB7BO15156 539 aaPredicted RBP9.05□□□□□ -0.96
CDKL5-211ENST00000637881 FIBPO43427 364 aa9.05□□□□□ -0.96
CDKL5-211ENST00000637881 PECAM1P16284 738 aaPredicted RBP9.05□□□□□ -0.96
CDKL5-211ENST00000637881 IL13P35225 146 aa9.05□□□□□ -0.96
CDKL5-211ENST00000637881 TUBB2AQ13885 445 aa9.05□□□□□ -0.96
CDKL5-211ENST00000637881 FILIP1LQ4L180 1135 aa9.05□□□□□ -0.96
CDKL5-211ENST00000637881 PLEKHO1Q53GL0 409 aaPredicted RBP9.05□□□□□ -0.96
CDKL5-211ENST00000637881 VPS53Q5VIR6 699 aa9.05□□□□□ -0.96
CDKL5-211ENST00000637881 SULT6B1Q6IMI4 303 aa9.05□□□□□ -0.96
CDKL5-211ENST00000637881 BRAPQ7Z569 592 aa9.05□□□□□ -0.96
CDKL5-211ENST00000637881 EYA1Q99502 592 aa9.05□□□□□ -0.96
CDKL5-211ENST00000637881 TUBB2BQ9BVA1 445 aa9.05□□□□□ -0.96
CDKL5-211ENST00000637881 CARD6Q9BX69 1037 aa9.05□□□□□ -0.96
CDKL5-211ENST00000637881 PARD6BQ9BYG5 372 aa9.05□□□□□ -0.96
CDKL5-211ENST00000637881 PRDM16Q9HAZ2 1276 aa9.05□□□□□ -0.96
CDKL5-211ENST00000637881 IRAK4Q9NWZ3 460 aa9.05□□□□□ -0.96
CDKL5-211ENST00000637881 FAN1Q9Y2M0 1017 aa9.05□□□□□ -0.96
CDKL5-211ENST00000637881 FAM169AQ9Y6X4 670 aa9.05□□□□□ -0.96
CDKL5-211ENST00000637881 A6NNZ2 444 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 AARSP49588 968 aaKnown RBP eCLIP9.04□□□□□ -0.96
CDKL5-211ENST00000637881 LIG3P49916 1009 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 IQCB1Q15051 598 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 TUBB8Q3ZCM7 444 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 C1QTNF12Q5T7M4 302 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 FNBP4Q8N3X1 1017 aaPredicted RBP9.04□□□□□ -0.96
CDKL5-211ENST00000637881 MAB21L3Q8N8X9 362 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 MICAL1Q8TDZ2 1067 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 AFAP1L1Q8TED9 768 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 KCNB2Q92953 911 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 DCTPP1Q9H773 170 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 ATP6V0A4Q9HBG4 840 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 PDE11AQ9HCR9 933 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 MYO6Q9UM54 1294 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 PARP3Q9Y6F1 533 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 COL22A1Q8NFW1 1626 aaPredicted RBP9.04□□□□□ -0.96
CDKL5-211ENST00000637881 CAMTA1Q9Y6Y1 1673 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 SDSP20132 328 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 FNTAP49354 379 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 CCNHP51946 323 aaPredicted RBP9.04□□□□□ -0.96
CDKL5-211ENST00000637881 MAP3K9P80192 1104 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 BEND6Q5SZJ8 279 aaPredicted RBP9.04□□□□□ -0.96
CDKL5-211ENST00000637881 RPUSD2Q8IZ73 545 aaKnown RBP9.04□□□□□ -0.96
CDKL5-211ENST00000637881 MSANTD4Q8NCY6 345 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 CHCHD3Q9NX63 227 aaKnown RBP9.04□□□□□ -0.96
CDKL5-211ENST00000637881 ANKRD26Q9UPS8 1709 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 TBC1D2BQ9UPU7 963 aa9.04□□□□□ -0.96
CDKL5-211ENST00000637881 MAP3K5Q99683 1374 aa9.03□□□□□ -0.96
CDKL5-211ENST00000637881 ZSCAN12O43309 604 aa9.03□□□□□ -0.96
CDKL5-211ENST00000637881 CAND2O75155 1236 aa9.03□□□□□ -0.96
CDKL5-211ENST00000637881 IMPDH2P12268 514 aa9.03□□□□□ -0.96
CDKL5-211ENST00000637881 ARHGAP25P42331 645 aa9.03□□□□□ -0.96
CDKL5-211ENST00000637881 CD151P48509 253 aa9.03□□□□□ -0.96
CDKL5-211ENST00000637881 KRT85P78386 507 aa9.03□□□□□ -0.96
CDKL5-211ENST00000637881 PPP2R3AQ06190 1150 aa9.03□□□□□ -0.96
CDKL5-211ENST00000637881 EXOSC9Q06265 439 aaKnown RBP9.03□□□□□ -0.96
CDKL5-211ENST00000637881 PDIA5Q14554 519 aa9.03□□□□□ -0.96
CDKL5-211ENST00000637881 STX1AQ16623 288 aa9.03□□□□□ -0.96
CDKL5-211ENST00000637881 FAM98CQ17RN3 349 aaKnown RBP9.03□□□□□ -0.96
CDKL5-211ENST00000637881 GORABQ5T7V8 394 aa9.03□□□□□ -0.96
CDKL5-211ENST00000637881 FBXW10Q5XX13 1052 aa9.03□□□□□ -0.96
CDKL5-211ENST00000637881 CDCA2Q69YH5 1023 aaPredicted RBP9.03□□□□□ -0.96
CDKL5-211ENST00000637881 TRIM65Q6PJ69 517 aa9.03□□□□□ -0.96
CDKL5-211ENST00000637881 TSHZ1Q6ZSZ6 1077 aa9.03□□□□□ -0.96
CDKL5-211ENST00000637881 B4GALNT4Q76KP1 1039 aa9.03□□□□□ -0.96
CDKL5-211ENST00000637881 YTHDF3Q7Z739 585 aaKnown RBP9.03□□□□□ -0.96
CDKL5-211ENST00000637881 HOMER1Q86YM7 354 aa9.03□□□□□ -0.96
CDKL5-211ENST00000637881 RBM12BQ8IXT5 1001 aaKnown RBP9.03□□□□□ -0.96
CDKL5-211ENST00000637881 PAGR1Q9BTK6 254 aa9.03□□□□□ -0.96
CDKL5-211ENST00000637881 OSBPL3Q9H4L5 887 aa9.03□□□□□ -0.96
CDKL5-211ENST00000637881 BICC1Q9H694 974 aaKnown RBP9.03□□□□□ -0.96
CDKL5-211ENST00000637881 MRFAP1Q9Y605 127 aa9.03□□□□□ -0.96
CDKL5-211ENST00000637881 WDR17Q8IZU2 1322 aa9.03□□□□□ -0.96
CDKL5-211ENST00000637881 LTN1O94822 1766 aa9.02□□□□□ -0.96
CDKL5-211ENST00000637881 SHTN1A0MZ66 631 aa9.02□□□□□ -0.97
CDKL5-211ENST00000637881 URI1O94763 535 aaPredicted RBP9.02□□□□□ -0.97
CDKL5-211ENST00000637881 EZRP15311 586 aaKnown RBP9.02□□□□□ -0.97
CDKL5-211ENST00000637881 SYT1P21579 422 aa9.02□□□□□ -0.97
CDKL5-211ENST00000637881 RBM5P52756 815 aaKnown RBP eCLIP9.02□□□□□ -0.97
CDKL5-211ENST00000637881 CLNS1AP54105 237 aaKnown RBP9.02□□□□□ -0.97
CDKL5-211ENST00000637881 DRP2Q13474 957 aa9.02□□□□□ -0.97
CDKL5-211ENST00000637881 KIF4BQ2VIQ3 1234 aa9.02□□□□□ -0.97
CDKL5-211ENST00000637881 POTEAQ6S8J7 498 aa9.02□□□□□ -0.97
CDKL5-211ENST00000637881 MMTAG2Q9BU76 263 aaKnown RBP9.02□□□□□ -0.97
CDKL5-211ENST00000637881 L1RE1Q9UN81 338 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms