RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 FAM155AB1AL88 458 aaPredicted RBP17.09■□□□□ 0.33
PNKP-228ENST00000637325 MS4A1P11836 297 aa17.09■□□□□ 0.33
PNKP-228ENST00000637325 RLBP1P12271 317 aa17.09■□□□□ 0.33
PNKP-228ENST00000637325 TIMM10P62072 90 aa17.09■□□□□ 0.33
PNKP-228ENST00000637325 HDLBPQ00341 1268 aaKnown RBP17.09■□□□□ 0.33
PNKP-228ENST00000637325 TFCP2Q12800 502 aa17.09■□□□□ 0.33
PNKP-228ENST00000637325 TNFAIP1Q13829 316 aa17.09■□□□□ 0.33
PNKP-228ENST00000637325 GRIK5Q16478 980 aa17.09■□□□□ 0.33
PNKP-228ENST00000637325 IFFO2Q5TF58 517 aa17.09■□□□□ 0.33
PNKP-228ENST00000637325 TNS4Q8IZW8 715 aa17.09■□□□□ 0.33
PNKP-228ENST00000637325 TEKT1Q969V4 418 aa17.09■□□□□ 0.33
PNKP-228ENST00000637325 TDRD3Q9H7E2 651 aaKnown RBP17.09■□□□□ 0.33
PNKP-228ENST00000637325 PRDM10Q9NQV6 1147 aa17.09■□□□□ 0.33
PNKP-228ENST00000637325 ZNF70Q9UC06 446 aaPredicted RBP17.09■□□□□ 0.33
PNKP-228ENST00000637325 MAST3O60307 1309 aa17.09■□□□□ 0.33
PNKP-228ENST00000637325 MYH2Q9UKX2 1941 aa17.09■□□□□ 0.33
PNKP-228ENST00000637325 AOX1Q06278 1338 aa17.08■□□□□ 0.32
PNKP-228ENST00000637325 SLC10A3P09131 477 aa17.08■□□□□ 0.32
PNKP-228ENST00000637325 HSPA8P11142 646 aaKnown RBP17.08■□□□□ 0.32
PNKP-228ENST00000637325 ADORA1P30542 326 aa17.08■□□□□ 0.32
PNKP-228ENST00000637325 KIF23Q02241 960 aaPredicted RBP17.08■□□□□ 0.32
PNKP-228ENST00000637325 SUPT20HL1Q3ZLR7 823 aa17.08■□□□□ 0.32
PNKP-228ENST00000637325 SPDYE2Q495Y8 402 aa17.08■□□□□ 0.32
PNKP-228ENST00000637325 NEUROD6Q96NK8 337 aa17.08■□□□□ 0.32
PNKP-228ENST00000637325 ZIC5Q96T25 663 aa17.08■□□□□ 0.32
PNKP-228ENST00000637325 C1orf115Q9H7X2 142 aa17.08■□□□□ 0.32
PNKP-228ENST00000637325 DENND2AQ9ULE3 1009 aa17.08■□□□□ 0.32
PNKP-228ENST00000637325 A0A1B0GUL7 405 aa17.07■□□□□ 0.32
PNKP-228ENST00000637325 SEMA3EO15041 775 aa17.07■□□□□ 0.32
PNKP-228ENST00000637325 CA12O43570 354 aa17.07■□□□□ 0.32
PNKP-228ENST00000637325 PPP1R12BO60237 982 aaPredicted RBP17.07■□□□□ 0.32
PNKP-228ENST00000637325 PHKA1P46020 1223 aa17.07■□□□□ 0.32
PNKP-228ENST00000637325 ATP8B2P98198 1209 aa17.07■□□□□ 0.32
PNKP-228ENST00000637325 OS9Q13438 667 aaPredicted RBP17.07■□□□□ 0.32
PNKP-228ENST00000637325 ANGEL1Q9UNK9 670 aaKnown RBP17.07■□□□□ 0.32
PNKP-228ENST00000637325 ZBTB7BO15156 539 aaPredicted RBP17.06■□□□□ 0.32
PNKP-228ENST00000637325 TNNI2P48788 182 aa17.06■□□□□ 0.32
PNKP-228ENST00000637325 RASA3Q14644 834 aa17.06■□□□□ 0.32
PNKP-228ENST00000637325 GORABQ5T7V8 394 aa17.06■□□□□ 0.32
PNKP-228ENST00000637325 CCDC102BQ68D86 513 aa17.06■□□□□ 0.32
PNKP-228ENST00000637325 RASAL3Q86YV0 1011 aa17.06■□□□□ 0.32
PNKP-228ENST00000637325 PANK1Q8TE04 598 aa17.06■□□□□ 0.32
PNKP-228ENST00000637325 XAGE2Q96GT9 111 aa17.06■□□□□ 0.32
PNKP-228ENST00000637325 MRIQ9BWK5 157 aa17.06■□□□□ 0.32
PNKP-228ENST00000637325 TMOD2Q9NZR1 351 aa17.06■□□□□ 0.32
PNKP-228ENST00000637325 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.06■□□□□ 0.32
PNKP-228ENST00000637325 TCP10L2B9ZVM9 353 aa17.05■□□□□ 0.32
PNKP-228ENST00000637325 LDHBP07195 334 aaKnown RBP17.05■□□□□ 0.32
PNKP-228ENST00000637325 MVPQ14764 893 aaKnown RBP17.05■□□□□ 0.32
PNKP-228ENST00000637325 ZDHHC15Q96MV8 337 aa17.05■□□□□ 0.32
PNKP-228ENST00000637325 TSKSQ9UJT2 592 aa17.05■□□□□ 0.32
PNKP-228ENST00000637325 RCAN3Q9UKA8 241 aa17.05■□□□□ 0.32
PNKP-228ENST00000637325 SURF6O75683 361 aaKnown RBP17.04■□□□□ 0.32
PNKP-228ENST00000637325 POLA2Q14181 598 aa17.04■□□□□ 0.32
PNKP-228ENST00000637325 NBPF12Q5TAG4 269 aaPredicted RBP17.04■□□□□ 0.32
PNKP-228ENST00000637325 HHIPL2Q6UWX4 724 aa17.04■□□□□ 0.32
PNKP-228ENST00000637325 REM2Q8IYK8 340 aaPredicted RBP17.04■□□□□ 0.32
PNKP-228ENST00000637325 ZGPATQ8N5A5 531 aaKnown RBP17.04■□□□□ 0.32
PNKP-228ENST00000637325 IREB2P48200 963 aaKnown RBP17.03■□□□□ 0.32
PNKP-228ENST00000637325 SSH3Q8TE77 659 aa17.03■□□□□ 0.32
PNKP-228ENST00000637325 FZD1Q9UP38 647 aa17.03■□□□□ 0.32
PNKP-228ENST00000637325 SALL1Q9NSC2 1324 aa17.02■□□□□ 0.32
PNKP-228ENST00000637325 PRDX5P30044 214 aa17.02■□□□□ 0.32
PNKP-228ENST00000637325 MKRN3Q13064 507 aaKnown RBP17.02■□□□□ 0.32
PNKP-228ENST00000637325 SLC10A4Q96EP9 437 aa17.02■□□□□ 0.32
PNKP-228ENST00000637325 CSRNP1Q96S65 589 aa17.02■□□□□ 0.32
PNKP-228ENST00000637325 ABCF2Q9UG63 623 aa17.02■□□□□ 0.32
PNKP-228ENST00000637325 CACNB3P54284 484 aa17.01■□□□□ 0.31
PNKP-228ENST00000637325 RASGRF1Q13972 1273 aa17.01■□□□□ 0.31
PNKP-228ENST00000637325 MAP3K11Q16584 847 aa17.01■□□□□ 0.31
PNKP-228ENST00000637325 LDLRAD1Q5T700 205 aa17.01■□□□□ 0.31
PNKP-228ENST00000637325 SPTY2D1Q68D10 685 aaPredicted RBP17.01■□□□□ 0.31
PNKP-228ENST00000637325 APOBEC3HQ6NTF7 200 aaKnown RBP17.01■□□□□ 0.31
PNKP-228ENST00000637325 TMEM39BQ9GZU3 492 aa17.01■□□□□ 0.31
PNKP-228ENST00000637325 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.01■□□□□ 0.31
PNKP-228ENST00000637325 SSC5DA1L4H1 1573 aa17■□□□□ 0.31
PNKP-228ENST00000637325 ZBTB22O15209 634 aa17■□□□□ 0.31
PNKP-228ENST00000637325 TRPA1O75762 1119 aa17■□□□□ 0.31
PNKP-228ENST00000637325 DIXDC1Q155Q3 683 aa17■□□□□ 0.31
PNKP-228ENST00000637325 DZIP1Q86YF9 867 aaKnown RBP17■□□□□ 0.31
PNKP-228ENST00000637325 PDS5AQ29RF7 1337 aaKnown RBP16.99■□□□□ 0.31
PNKP-228ENST00000637325 OTOFQ9HC10 1997 aa16.99■□□□□ 0.31
PNKP-228ENST00000637325 UNCXA6NJT0 531 aa16.99■□□□□ 0.31
PNKP-228ENST00000637325 USP2O75604 605 aaPredicted RBP16.99■□□□□ 0.31
PNKP-228ENST00000637325 UQCRFS1P1P0C7P4 283 aa16.99■□□□□ 0.31
PNKP-228ENST00000637325 FKBP1CQ5VVH2 108 aa16.99■□□□□ 0.31
PNKP-228ENST00000637325 CEP85Q6P2H3 762 aa16.99■□□□□ 0.31
PNKP-228ENST00000637325 SLF2Q8IX21 1173 aa16.99■□□□□ 0.31
PNKP-228ENST00000637325 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.99■□□□□ 0.31
PNKP-228ENST00000637325 CHMP4BQ9H444 224 aaKnown RBP16.99■□□□□ 0.31
PNKP-228ENST00000637325 GPR108Q9NPR9 543 aa16.99■□□□□ 0.31
PNKP-228ENST00000637325 RNF186Q9NXI6 227 aa16.99■□□□□ 0.31
PNKP-228ENST00000637325 SAGE1Q9NXZ1 904 aa16.99■□□□□ 0.31
PNKP-228ENST00000637325 DDX19BQ9UMR2 479 aa16.99■□□□□ 0.31
PNKP-228ENST00000637325 COG6Q9Y2V7 657 aa16.99■□□□□ 0.31
PNKP-228ENST00000637325 DAGLAQ9Y4D2 1042 aa16.99■□□□□ 0.31
PNKP-228ENST00000637325 SREBF2Q12772 1141 aa16.98■□□□□ 0.31
PNKP-228ENST00000637325 TNNI3KQ59H18 835 aa16.98■□□□□ 0.31
PNKP-228ENST00000637325 ERICH6Q7L0X2 663 aa16.98■□□□□ 0.31
PNKP-228ENST00000637325 FAM83AQ86UY5 434 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms