RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 EDC3Q96F86 508 aaKnown RBP19.46■□□□□ 0.71
CLN6-216ENST00000636876 ANTXR1Q9H6X2 564 aa19.46■□□□□ 0.71
CLN6-216ENST00000636876 HACL1Q9UJ83 578 aa19.46■□□□□ 0.71
CLN6-216ENST00000636876 HDAC9Q9UKV0 1011 aa19.46■□□□□ 0.71
CLN6-216ENST00000636876 TTF2Q9UNY4 1162 aaKnown RBP19.46■□□□□ 0.71
CLN6-216ENST00000636876 SCN4AP35499 1836 aa19.46■□□□□ 0.71
CLN6-216ENST00000636876 H7C1D1 291 aa19.45■□□□□ 0.7
CLN6-216ENST00000636876 OGFOD1Q8N543 542 aa19.45■□□□□ 0.7
CLN6-216ENST00000636876 NMRK2Q9NPI5 230 aa19.45■□□□□ 0.7
CLN6-216ENST00000636876 LRP2BPQ9P2M1 347 aa19.45■□□□□ 0.7
CLN6-216ENST00000636876 GTF3C3Q9Y5Q9 886 aa19.45■□□□□ 0.7
CLN6-216ENST00000636876 MAST3O60307 1309 aa19.45■□□□□ 0.7
CLN6-216ENST00000636876 VEGFAP15692 232 aaPredicted RBP19.44■□□□□ 0.7
CLN6-216ENST00000636876 DZIP1Q86YF9 867 aaKnown RBP19.44■□□□□ 0.7
CLN6-216ENST00000636876 RRAGCQ9HB90 399 aa19.44■□□□□ 0.7
CLN6-216ENST00000636876 RAI14Q9P0K7 980 aa19.44■□□□□ 0.7
CLN6-216ENST00000636876 MYO5AQ9Y4I1 1855 aaKnown RBP19.43■□□□□ 0.7
CLN6-216ENST00000636876 IGSF3O75054 1194 aa19.43■□□□□ 0.7
CLN6-216ENST00000636876 HDLBPQ00341 1268 aaKnown RBP19.43■□□□□ 0.7
CLN6-216ENST00000636876 SKAP1Q86WV1 359 aa19.43■□□□□ 0.7
CLN6-216ENST00000636876 TAF1DQ9H5J8 278 aaPredicted RBP19.43■□□□□ 0.7
CLN6-216ENST00000636876 ADARB2Q9NS39 739 aaKnown RBP19.43■□□□□ 0.7
CLN6-216ENST00000636876 DOCK2Q92608 1830 aa19.43■□□□□ 0.7
CLN6-216ENST00000636876 IDH1O75874 414 aaKnown RBP19.42■□□□□ 0.7
CLN6-216ENST00000636876 MAP4K4O95819 1239 aaPredicted RBP19.42■□□□□ 0.7
CLN6-216ENST00000636876 EPHX2P34913 555 aa19.42■□□□□ 0.7
CLN6-216ENST00000636876 MECOMQ03112 1051 aa19.42■□□□□ 0.7
CLN6-216ENST00000636876 ZNF384Q8TF68 577 aa19.42■□□□□ 0.7
CLN6-216ENST00000636876 MRIQ9BWK5 157 aa19.42■□□□□ 0.7
CLN6-216ENST00000636876 MYOZ2Q9NPC6 264 aa19.42■□□□□ 0.7
CLN6-216ENST00000636876 SERPINA10Q9UK55 444 aa19.42■□□□□ 0.7
CLN6-216ENST00000636876 EGFRP00533 1210 aa19.41■□□□□ 0.7
CLN6-216ENST00000636876 CRKP46108 304 aa19.41■□□□□ 0.7
CLN6-216ENST00000636876 MAP3K12Q12852 859 aa19.41■□□□□ 0.7
CLN6-216ENST00000636876 TBC1D10BQ4KMP7 808 aaPredicted RBP19.41■□□□□ 0.7
CLN6-216ENST00000636876 SAMD7Q7Z3H4 446 aa19.41■□□□□ 0.7
CLN6-216ENST00000636876 TRPM4Q8TD43 1214 aa19.41■□□□□ 0.7
CLN6-216ENST00000636876 TEKT1Q969V4 418 aa19.41■□□□□ 0.7
CLN6-216ENST00000636876 NSUN4Q96CB9 384 aaKnown RBP19.41■□□□□ 0.7
CLN6-216ENST00000636876 MAST2Q6P0Q8 1798 aa19.41■□□□□ 0.7
CLN6-216ENST00000636876 GSTO1P78417 241 aa19.4■□□□□ 0.7
CLN6-216ENST00000636876 DLGAP5Q15398 846 aa19.4■□□□□ 0.7
CLN6-216ENST00000636876 DIXDC1Q155Q3 683 aa19.4■□□□□ 0.7
CLN6-216ENST00000636876 KIF4BQ2VIQ3 1234 aa19.4■□□□□ 0.7
CLN6-216ENST00000636876 CFAP100Q494V2 611 aa19.4■□□□□ 0.7
CLN6-216ENST00000636876 TTC22Q5TAA0 569 aa19.4■□□□□ 0.7
CLN6-216ENST00000636876 IFFO2Q5TF58 517 aa19.4■□□□□ 0.7
CLN6-216ENST00000636876 HHIPL2Q6UWX4 724 aa19.4■□□□□ 0.7
CLN6-216ENST00000636876 SLF2Q8IX21 1173 aa19.4■□□□□ 0.7
CLN6-216ENST00000636876 KBTBD3Q8NAB2 608 aa19.4■□□□□ 0.7
CLN6-216ENST00000636876 MTMR14Q8NCE2 650 aa19.4■□□□□ 0.7
CLN6-216ENST00000636876 ADAMTSL1Q8N6G6 1762 aa19.39■□□□□ 0.7
CLN6-216ENST00000636876 TOMM70O94826 608 aa19.39■□□□□ 0.69
CLN6-216ENST00000636876 RBM26Q5T8P6 1007 aaKnown RBP19.39■□□□□ 0.69
CLN6-216ENST00000636876 NAA16Q6N069 864 aaPredicted RBP19.39■□□□□ 0.69
CLN6-216ENST00000636876 TMED8Q6PL24 325 aaPredicted RBP19.39■□□□□ 0.69
CLN6-216ENST00000636876 USP50Q70EL3 339 aaPredicted RBP19.39■□□□□ 0.69
CLN6-216ENST00000636876 FAM163AQ96GL9 167 aaPredicted RBP19.39■□□□□ 0.69
CLN6-216ENST00000636876 ZBED3Q96IU2 234 aaPredicted RBP19.39■□□□□ 0.69
CLN6-216ENST00000636876 ZDHHC15Q96MV8 337 aa19.39■□□□□ 0.69
CLN6-216ENST00000636876 DAGLAQ9Y4D2 1042 aa19.39■□□□□ 0.69
CLN6-216ENST00000636876 MYH2Q9UKX2 1941 aa19.39■□□□□ 0.69
CLN6-216ENST00000636876 MROH7-TTC4A0A0A0MT08 1334 aa19.38■□□□□ 0.69
CLN6-216ENST00000636876 SPDYE2BA6NHP3 402 aa19.38■□□□□ 0.69
CLN6-216ENST00000636876 GAKO14976 1311 aa19.38■□□□□ 0.69
CLN6-216ENST00000636876 LDHCP07864 332 aa19.38■□□□□ 0.69
CLN6-216ENST00000636876 SPDYE6P0CI01 402 aa19.38■□□□□ 0.69
CLN6-216ENST00000636876 PDE6AP16499 860 aa19.38■□□□□ 0.69
CLN6-216ENST00000636876 RGS3P49796 1198 aa19.38■□□□□ 0.69
CLN6-216ENST00000636876 RBM5P52756 815 aaKnown RBP eCLIP19.38■□□□□ 0.69
CLN6-216ENST00000636876 HIRAP54198 1017 aaPredicted RBP19.38■□□□□ 0.69
CLN6-216ENST00000636876 PNMA8AQ86V59 439 aaPredicted RBP19.38■□□□□ 0.69
CLN6-216ENST00000636876 EVI5LQ96CN4 794 aa19.38■□□□□ 0.69
CLN6-216ENST00000636876 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.38■□□□□ 0.69
CLN6-216ENST00000636876 PCDHAC2Q9Y5I4 1007 aa19.38■□□□□ 0.69
CLN6-216ENST00000636876 TRIM6-TRIM34B2RNG4 842 aa19.37■□□□□ 0.69
CLN6-216ENST00000636876 GSPT1P15170 499 aaKnown RBP19.37■□□□□ 0.69
CLN6-216ENST00000636876 SLC9C2Q5TAH2 1124 aa19.37■□□□□ 0.69
CLN6-216ENST00000636876 CNTROBQ8N137 903 aa19.37■□□□□ 0.69
CLN6-216ENST00000636876 MAGEB6Q8N7X4 407 aa19.37■□□□□ 0.69
CLN6-216ENST00000636876 FSD1Q9BTV5 496 aa19.37■□□□□ 0.69
CLN6-216ENST00000636876 MYH7P12883 1935 aa19.37■□□□□ 0.69
CLN6-216ENST00000636876 WNT10BO00744 389 aa19.36■□□□□ 0.69
CLN6-216ENST00000636876 CYP7A1P22680 504 aa19.36■□□□□ 0.69
CLN6-216ENST00000636876 ADD2P35612 726 aa19.36■□□□□ 0.69
CLN6-216ENST00000636876 APLP1P51693 650 aa19.36■□□□□ 0.69
CLN6-216ENST00000636876 NBPF9Q3BBW0 867 aa19.36■□□□□ 0.69
CLN6-216ENST00000636876 EAPPQ56P03 285 aaPredicted RBP19.36■□□□□ 0.69
CLN6-216ENST00000636876 ZSCAN25Q6NSZ9 544 aa19.36■□□□□ 0.69
CLN6-216ENST00000636876 APOBEC3HQ6NTF7 200 aaKnown RBP19.36■□□□□ 0.69
CLN6-216ENST00000636876 RILPL2Q969X0 211 aa19.36■□□□□ 0.69
CLN6-216ENST00000636876 PRMT6Q96LA8 375 aaPredicted RBP19.36■□□□□ 0.69
CLN6-216ENST00000636876 TCRBV5S4A2TA0A5A2 114 aa19.35■□□□□ 0.69
CLN6-216ENST00000636876 LRRFIP1Q32MZ4 808 aaKnown RBP19.35■□□□□ 0.69
CLN6-216ENST00000636876 ZNF532Q9HCE3 1301 aa19.34■□□□□ 0.69
CLN6-216ENST00000636876 GPR75-ASB3A0A0A6YYF3 556 aa19.34■□□□□ 0.69
CLN6-216ENST00000636876 ZFYP08048 801 aaPredicted RBP19.34■□□□□ 0.69
CLN6-216ENST00000636876 UBE3CQ15386 1083 aa19.34■□□□□ 0.69
CLN6-216ENST00000636876 ADGRA1Q86SQ6 560 aa19.34■□□□□ 0.69
CLN6-216ENST00000636876 TICAM2Q86XR7 235 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms