RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 RASA3Q14644 834 aa22.32■■□□□ 1.16
PNKP-225ENST00000636214 SPDYE2Q495Y8 402 aa22.32■■□□□ 1.16
PNKP-225ENST00000636214 TEKT1Q969V4 418 aa22.32■■□□□ 1.16
PNKP-225ENST00000636214 TDRD3Q9H7E2 651 aaKnown RBP22.32■■□□□ 1.16
PNKP-225ENST00000636214 GNL3LQ9NVN8 582 aaKnown RBP22.32■■□□□ 1.16
PNKP-225ENST00000636214 TMOD2Q9NZR1 351 aa22.32■■□□□ 1.16
PNKP-225ENST00000636214 CIAO1O76071 339 aa22.31■■□□□ 1.16
PNKP-225ENST00000636214 FGFR2P21802 821 aa22.31■■□□□ 1.16
PNKP-225ENST00000636214 ATP2B3Q16720 1220 aa22.31■■□□□ 1.16
PNKP-225ENST00000636214 HDLBPQ00341 1268 aaKnown RBP22.3■■□□□ 1.16
PNKP-225ENST00000636214 MAP3K11Q16584 847 aa22.3■■□□□ 1.16
PNKP-225ENST00000636214 LDLRAD1Q5T700 205 aa22.3■■□□□ 1.16
PNKP-225ENST00000636214 DIEXFQ68CQ4 756 aaKnown RBP22.3■■□□□ 1.16
PNKP-225ENST00000636214 FRAT1Q92837 279 aaPredicted RBP22.3■■□□□ 1.16
PNKP-225ENST00000636214 MEIS3Q99687 375 aa22.3■■□□□ 1.16
PNKP-225ENST00000636214 SUGT1Q9Y2Z0 365 aa22.3■■□□□ 1.16
PNKP-225ENST00000636214 UNCXA6NJT0 531 aa22.29■■□□□ 1.16
PNKP-225ENST00000636214 TCP10L2B9ZVM9 353 aa22.29■■□□□ 1.16
PNKP-225ENST00000636214 IL15P40933 162 aaPredicted RBP22.29■■□□□ 1.16
PNKP-225ENST00000636214 HNRNPUQ00839 825 aaKnown RBP eCLIP22.29■■□□□ 1.16
PNKP-225ENST00000636214 NBPF12Q5TAG4 269 aaPredicted RBP22.29■■□□□ 1.16
PNKP-225ENST00000636214 SPRYD7Q5W111 196 aa22.29■■□□□ 1.16
PNKP-225ENST00000636214 WDR66Q8TBY9 1149 aa22.29■■□□□ 1.16
PNKP-225ENST00000636214 FZD1Q9UP38 647 aa22.29■■□□□ 1.16
PNKP-225ENST00000636214 AOX1Q06278 1338 aa22.29■■□□□ 1.16
PNKP-225ENST00000636214 INTS3Q68E01 1043 aaKnown RBP22.28■■□□□ 1.16
PNKP-225ENST00000636214 ATG9AQ7Z3C6 839 aa22.28■■□□□ 1.16
PNKP-225ENST00000636214 SSC5DA1L4H1 1573 aa22.27■■□□□ 1.16
PNKP-225ENST00000636214 TM4SF4P48230 202 aa22.27■■□□□ 1.16
PNKP-225ENST00000636214 MANSC4A6NHS7 340 aaPredicted RBP22.26■■□□□ 1.15
PNKP-225ENST00000636214 ALDH1A1P00352 501 aa22.26■■□□□ 1.15
PNKP-225ENST00000636214 ZBTB48P10074 688 aaPredicted RBP22.26■■□□□ 1.15
PNKP-225ENST00000636214 ATF7IPQ6VMQ6 1270 aa22.26■■□□□ 1.15
PNKP-225ENST00000636214 ANKRD13AQ8IZ07 590 aa22.26■■□□□ 1.15
PNKP-225ENST00000636214 PA2G4Q9UQ80 394 aaKnown RBP22.26■■□□□ 1.15
PNKP-225ENST00000636214 SRGAP3O43295 1099 aa22.25■■□□□ 1.15
PNKP-225ENST00000636214 TBC1D8O95759 1140 aa22.25■■□□□ 1.15
PNKP-225ENST00000636214 INHBEP58166 350 aa22.25■■□□□ 1.15
PNKP-225ENST00000636214 GRIK5Q16478 980 aa22.25■■□□□ 1.15
PNKP-225ENST00000636214 MIER1Q8N108 512 aa22.25■■□□□ 1.15
PNKP-225ENST00000636214 WNK4Q96J92 1243 aa22.25■■□□□ 1.15
PNKP-225ENST00000636214 MRIQ9BWK5 157 aa22.25■■□□□ 1.15
PNKP-225ENST00000636214 COPRSQ9NQ92 184 aa22.25■■□□□ 1.15
PNKP-225ENST00000636214 TRIM27P14373 513 aa22.24■■□□□ 1.15
PNKP-225ENST00000636214 CTU1Q7Z7A3 348 aaKnown RBP22.24■■□□□ 1.15
PNKP-225ENST00000636214 CLMNQ96JQ2 1002 aa22.24■■□□□ 1.15
PNKP-225ENST00000636214 ZDHHC15Q96MV8 337 aa22.24■■□□□ 1.15
PNKP-225ENST00000636214 TMEM39BQ9GZU3 492 aa22.24■■□□□ 1.15
PNKP-225ENST00000636214 USP2O75604 605 aaPredicted RBP22.23■■□□□ 1.15
PNKP-225ENST00000636214 BCAR3O75815 825 aa22.23■■□□□ 1.15
PNKP-225ENST00000636214 HHIPL2Q6UWX4 724 aa22.23■■□□□ 1.15
PNKP-225ENST00000636214 CLUAP1Q96AJ1 413 aa22.23■■□□□ 1.15
PNKP-225ENST00000636214 HOOK2Q96ED9 719 aa22.23■■□□□ 1.15
PNKP-225ENST00000636214 DENND2AQ9ULE3 1009 aa22.23■■□□□ 1.15
PNKP-225ENST00000636214 SEMA3EO15041 775 aa22.22■■□□□ 1.15
PNKP-225ENST00000636214 GNAI2P04899 355 aa22.22■■□□□ 1.15
PNKP-225ENST00000636214 ZKSCAN2Q63HK3 967 aa22.22■■□□□ 1.15
PNKP-225ENST00000636214 OTUD7BQ6GQQ9 843 aa22.22■■□□□ 1.15
PNKP-225ENST00000636214 AKAP2Q9Y2D5 859 aa22.22■■□□□ 1.15
PNKP-225ENST00000636214 CSADQ9Y600 493 aa22.22■■□□□ 1.15
PNKP-225ENST00000636214 LDHBP07195 334 aaKnown RBP22.21■■□□□ 1.15
PNKP-225ENST00000636214 CACNB3P54284 484 aa22.21■■□□□ 1.15
PNKP-225ENST00000636214 ZGPATQ8N5A5 531 aaKnown RBP22.21■■□□□ 1.15
PNKP-225ENST00000636214 ZNF296Q8WUU4 475 aaPredicted RBP22.2■■□□□ 1.14
PNKP-225ENST00000636214 ELP3Q9H9T3 547 aa22.2■■□□□ 1.14
PNKP-225ENST00000636214 GPR25O00155 361 aa22.19■■□□□ 1.14
PNKP-225ENST00000636214 FKBP1CQ5VVH2 108 aa22.19■■□□□ 1.14
PNKP-225ENST00000636214 FAM83AQ86UY5 434 aa22.19■■□□□ 1.14
PNKP-225ENST00000636214 IFNL1Q8IU54 200 aa22.19■■□□□ 1.14
PNKP-225ENST00000636214 FTSJ3Q8IY81 847 aaKnown RBP22.19■■□□□ 1.14
PNKP-225ENST00000636214 TEPSINQ96N21 525 aa22.19■■□□□ 1.14
PNKP-225ENST00000636214 OTOFQ9HC10 1997 aa22.18■■□□□ 1.14
PNKP-225ENST00000636214 AK9Q5TCS8 1911 aa22.18■■□□□ 1.14
PNKP-225ENST00000636214 PHKA1P46020 1223 aa22.18■■□□□ 1.14
PNKP-225ENST00000636214 MAP3K9P80192 1104 aa22.18■■□□□ 1.14
PNKP-225ENST00000636214 MTX1Q13505 466 aa22.18■■□□□ 1.14
PNKP-225ENST00000636214 NOM1Q5C9Z4 860 aaKnown RBP22.18■■□□□ 1.14
PNKP-225ENST00000636214 DCAF15Q66K64 600 aa22.18■■□□□ 1.14
PNKP-225ENST00000636214 APOBEC3HQ6NTF7 200 aaKnown RBP22.18■■□□□ 1.14
PNKP-225ENST00000636214 CFHR5Q9BXR6 569 aa22.18■■□□□ 1.14
PNKP-225ENST00000636214 SALL1Q9NSC2 1324 aa22.17■■□□□ 1.14
PNKP-225ENST00000636214 FKTNO75072 461 aa22.17■■□□□ 1.14
PNKP-225ENST00000636214 PRDX5P30044 214 aa22.17■■□□□ 1.14
PNKP-225ENST00000636214 G3BP1Q13283 466 aaKnown RBP eCLIP22.17■■□□□ 1.14
PNKP-225ENST00000636214 MVPQ14764 893 aaKnown RBP22.17■■□□□ 1.14
PNKP-225ENST00000636214 PKN2Q16513 984 aaKnown RBP22.17■■□□□ 1.14
PNKP-225ENST00000636214 GORABQ5T7V8 394 aa22.17■■□□□ 1.14
PNKP-225ENST00000636214 CCDC102BQ68D86 513 aa22.17■■□□□ 1.14
PNKP-225ENST00000636214 OPTNQ96CV9 577 aa22.17■■□□□ 1.14
PNKP-225ENST00000636214 A0A1B0GUL7 405 aa22.16■■□□□ 1.14
PNKP-225ENST00000636214 ADORA1P30542 326 aa22.16■■□□□ 1.14
PNKP-225ENST00000636214 TFCP2Q12800 502 aa22.16■■□□□ 1.14
PNKP-225ENST00000636214 DIXDC1Q155Q3 683 aa22.16■■□□□ 1.14
PNKP-225ENST00000636214 DZIP1Q86YF9 867 aaKnown RBP22.16■■□□□ 1.14
PNKP-225ENST00000636214 CDAN1Q8IWY9 1227 aa22.16■■□□□ 1.14
PNKP-225ENST00000636214 SLF2Q8IX21 1173 aa22.16■■□□□ 1.14
PNKP-225ENST00000636214 NEUROD6Q96NK8 337 aa22.16■■□□□ 1.14
PNKP-225ENST00000636214 TNNQ9UQP3 1299 aa22.16■■□□□ 1.14
PNKP-225ENST00000636214 DAGLAQ9Y4D2 1042 aa22.16■■□□□ 1.14
PNKP-225ENST00000636214 RPAP1Q9BWH6 1393 aaPredicted RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms