RNA–Protein interactions for RNA: ENST00000635761.1

CLN5-204, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 4

Gene CLN5, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-204ENST00000635761 SLC39A6Q13433 755 aa9.67□□□□□ -0.86
CLN5-204ENST00000635761 NFIXQ14938 502 aa9.67□□□□□ -0.86
CLN5-204ENST00000635761 OSBPL3Q9H4L5 887 aa9.67□□□□□ -0.86
CLN5-204ENST00000635761 RNF181Q9P0P0 153 aa9.67□□□□□ -0.86
CLN5-204ENST00000635761 COL15A1P39059 1388 aa9.66□□□□□ -0.86
CLN5-204ENST00000635761 USP17L5A8MUK1 530 aa9.66□□□□□ -0.86
CLN5-204ENST00000635761 ATP9BO43861 1147 aa9.66□□□□□ -0.86
CLN5-204ENST00000635761 HMOX1P09601 288 aa9.66□□□□□ -0.86
CLN5-204ENST00000635761 PTGIRP43119 386 aa9.66□□□□□ -0.86
CLN5-204ENST00000635761 PRELPP51888 382 aa9.66□□□□□ -0.86
CLN5-204ENST00000635761 MTHFSDQ2M296 383 aaKnown RBP9.66□□□□□ -0.86
CLN5-204ENST00000635761 EML3Q32P44 896 aa9.66□□□□□ -0.86
CLN5-204ENST00000635761 C16orf71Q8IYS4 520 aaPredicted RBP9.66□□□□□ -0.86
CLN5-204ENST00000635761 LAMB4A4D0S4 1761 aa9.65□□□□□ -0.86
CLN5-204ENST00000635761 SPINT1O43278 529 aa9.65□□□□□ -0.86
CLN5-204ENST00000635761 SERPINB2P05120 415 aa9.65□□□□□ -0.86
CLN5-204ENST00000635761 HTRA3P83110 453 aa9.65□□□□□ -0.86
CLN5-204ENST00000635761 ZNF787Q6DD87 383 aa9.65□□□□□ -0.86
CLN5-204ENST00000635761 TBC1D9Q6ZT07 1266 aa9.65□□□□□ -0.86
CLN5-204ENST00000635761 JMYQ8N9B5 988 aa9.65□□□□□ -0.86
CLN5-204ENST00000635761 TRPM7Q96QT4 1865 aa9.65□□□□□ -0.86
CLN5-204ENST00000635761 POTECB2RU33 542 aa9.64□□□□□ -0.87
CLN5-204ENST00000635761 DIAPH1O60610 1272 aaKnown RBP9.64□□□□□ -0.87
CLN5-204ENST00000635761 EIF5P55010 431 aaKnown RBP9.64□□□□□ -0.87
CLN5-204ENST00000635761 NCOA4Q13772 614 aa9.64□□□□□ -0.87
CLN5-204ENST00000635761 PLEKHM2Q8IWE5 1019 aa9.64□□□□□ -0.87
CLN5-204ENST00000635761 KDF1Q8NAX2 398 aaPredicted RBP9.64□□□□□ -0.87
CLN5-204ENST00000635761 KLRG1Q96E93 195 aa9.64□□□□□ -0.87
CLN5-204ENST00000635761 ZBTB1Q9Y2K1 713 aa9.64□□□□□ -0.87
CLN5-204ENST00000635761 COL3A1P02461 1466 aaPredicted RBP9.64□□□□□ -0.87
CLN5-204ENST00000635761 KIF7Q2M1P5 1343 aa9.63□□□□□ -0.87
CLN5-204ENST00000635761 POLR2AP24928 1970 aaKnown RBP9.63□□□□□ -0.87
CLN5-204ENST00000635761 USP17L3A6NCW0 530 aa9.63□□□□□ -0.87
CLN5-204ENST00000635761 USP17L4A6NCW7 530 aa9.63□□□□□ -0.87
CLN5-204ENST00000635761 GLTPD2A6NH11 291 aa9.63□□□□□ -0.87
CLN5-204ENST00000635761 H0YIN7 160 aa9.63□□□□□ -0.87
CLN5-204ENST00000635761 VEGFAP15692 232 aaPredicted RBP9.63□□□□□ -0.87
CLN5-204ENST00000635761 LMNB1P20700 586 aa9.63□□□□□ -0.87
CLN5-204ENST00000635761 CANXP27824 592 aaKnown RBP9.63□□□□□ -0.87
CLN5-204ENST00000635761 USP17L2Q6R6M4 530 aa9.63□□□□□ -0.87
CLN5-204ENST00000635761 USP17L1Q7RTZ2 530 aa9.63□□□□□ -0.87
CLN5-204ENST00000635761 TTLL6Q8N841 843 aa9.63□□□□□ -0.87
CLN5-204ENST00000635761 IL17REQ8NFR9 667 aa9.63□□□□□ -0.87
CLN5-204ENST00000635761 ZNF395Q9H8N7 513 aaPredicted RBP9.63□□□□□ -0.87
CLN5-204ENST00000635761 NOD1Q9Y239 953 aa9.63□□□□□ -0.87
CLN5-204ENST00000635761 KDM3BQ7LBC6 1761 aa9.63□□□□□ -0.87
CLN5-204ENST00000635761 CARMIL3Q8ND23 1372 aa9.63□□□□□ -0.87
CLN5-204ENST00000635761 STARD3NLO95772 234 aa9.62□□□□□ -0.87
CLN5-204ENST00000635761 GNRH1P01148 92 aa9.62□□□□□ -0.87
CLN5-204ENST00000635761 RASSF7Q02833 373 aa9.62□□□□□ -0.87
CLN5-204ENST00000635761 C2CD5Q86YS7 1000 aa9.62□□□□□ -0.87
CLN5-204ENST00000635761 DEPDC4Q8N2C3 294 aa9.62□□□□□ -0.87
CLN5-204ENST00000635761 SMC1BQ8NDV3 1235 aa9.62□□□□□ -0.87
CLN5-204ENST00000635761 PPP1R12CQ9BZL4 782 aa9.62□□□□□ -0.87
CLN5-204ENST00000635761 TFIP11Q9UBB9 837 aaKnown RBP9.62□□□□□ -0.87
CLN5-204ENST00000635761 LAMB2P55268 1798 aa9.62□□□□□ -0.87
CLN5-204ENST00000635761 A0A087WZG4 1122 aa9.61□□□□□ -0.87
CLN5-204ENST00000635761 PALM3A6NDB9 673 aaPredicted RBP9.61□□□□□ -0.87
CLN5-204ENST00000635761 SNRPBP14678 240 aaKnown RBP9.61□□□□□ -0.87
CLN5-204ENST00000635761 ZNF790Q6PG37 636 aa9.61□□□□□ -0.87
CLN5-204ENST00000635761 ZNF496Q96IT1 587 aaPredicted RBP9.61□□□□□ -0.87
CLN5-204ENST00000635761 INSM2Q96T92 566 aaPredicted RBP9.61□□□□□ -0.87
CLN5-204ENST00000635761 BRIP1Q9BX63 1249 aa9.61□□□□□ -0.87
CLN5-204ENST00000635761 TEX13AQ9BXU3 409 aaPredicted RBP9.61□□□□□ -0.87
CLN5-204ENST00000635761 POLMQ9NP87 494 aaPredicted RBP9.61□□□□□ -0.87
CLN5-204ENST00000635761 MAFBQ9Y5Q3 323 aaPredicted RBP9.61□□□□□ -0.87
CLN5-204ENST00000635761 TAF1P21675 1872 aa9.61□□□□□ -0.87
CLN5-204ENST00000635761 HEG1Q9ULI3 1381 aa9.61□□□□□ -0.87
CLN5-204ENST00000635761 ANKRD36CQ5JPF3 1778 aa9.6□□□□□ -0.87
CLN5-204ENST00000635761 A0A1W2PRU2 124 aa9.6□□□□□ -0.87
CLN5-204ENST00000635761 TTLL8A6PVC2 850 aa9.6□□□□□ -0.87
CLN5-204ENST00000635761 GNAT3A8MTJ3 354 aa9.6□□□□□ -0.87
CLN5-204ENST00000635761 NFKBIEO00221 500 aa9.6□□□□□ -0.87
CLN5-204ENST00000635761 PDE6BP35913 854 aa9.6□□□□□ -0.87
CLN5-204ENST00000635761 CC2D1BQ5T0F9 858 aaKnown RBP9.6□□□□□ -0.87
CLN5-204ENST00000635761 COL13A1Q5TAT6 717 aaPredicted RBP9.6□□□□□ -0.87
CLN5-204ENST00000635761 TBC1D9BQ66K14 1250 aa9.6□□□□□ -0.87
CLN5-204ENST00000635761 CCER1Q8TC90 406 aaPredicted RBP9.6□□□□□ -0.87
CLN5-204ENST00000635761 ARHGEF10LQ9HCE6 1279 aa9.6□□□□□ -0.87
CLN5-204ENST00000635761 NPC1L1Q9UHC9 1359 aa9.6□□□□□ -0.87
CLN5-204ENST00000635761 ADAMTSL1Q8N6G6 1762 aa9.6□□□□□ -0.87
CLN5-204ENST00000635761 MEN1O00255 615 aa9.59□□□□□ -0.87
CLN5-204ENST00000635761 IL6STP40189 918 aaPredicted RBP9.59□□□□□ -0.87
CLN5-204ENST00000635761 CLN3Q13286 438 aa9.59□□□□□ -0.87
CLN5-204ENST00000635761 PRR5LQ6MZQ0 368 aa9.59□□□□□ -0.87
CLN5-204ENST00000635761 BICDL1Q6ZP65 573 aa9.59□□□□□ -0.87
CLN5-204ENST00000635761 TRIM50Q86XT4 487 aa9.59□□□□□ -0.87
CLN5-204ENST00000635761 TTC5Q8N0Z6 440 aa9.59□□□□□ -0.87
CLN5-204ENST00000635761 CEMIPQ8WUJ3 1361 aa9.59□□□□□ -0.87
CLN5-204ENST00000635761 C21orf2O43822 256 aa9.58□□□□□ -0.88
CLN5-204ENST00000635761 MAN1A2O60476 641 aa9.58□□□□□ -0.88
CLN5-204ENST00000635761 A1BGP04217 495 aa9.58□□□□□ -0.88
CLN5-204ENST00000635761 CTSOP43234 321 aaPredicted RBP9.58□□□□□ -0.88
CLN5-204ENST00000635761 TEFQ10587 303 aa9.58□□□□□ -0.88
CLN5-204ENST00000635761 PHACTR3Q96KR7 559 aa9.58□□□□□ -0.88
CLN5-204ENST00000635761 NLRP3Q96P20 1036 aa9.58□□□□□ -0.88
CLN5-204ENST00000635761 GPC1P35052 558 aa9.57□□□□□ -0.88
CLN5-204ENST00000635761 GTF2IP78347 998 aa9.57□□□□□ -0.88
CLN5-204ENST00000635761 GAS2L2Q8NHY3 880 aa9.57□□□□□ -0.88
CLN5-204ENST00000635761 ZNF622Q969S3 477 aaKnown RBP eCLIP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms