RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 PI16Q6UXB8 463 aa18.94■□□□□ 0.62
CLN6-211ENST00000635754 CNTROBQ8N137 903 aa18.94■□□□□ 0.62
CLN6-211ENST00000635754 MTMR14Q8NCE2 650 aa18.94■□□□□ 0.62
CLN6-211ENST00000635754 GGA3Q9NZ52 723 aa18.94■□□□□ 0.62
CLN6-211ENST00000635754 ZBTB47Q9UFB7 747 aaPredicted RBP18.94■□□□□ 0.62
CLN6-211ENST00000635754 SERPINA10Q9UK55 444 aa18.94■□□□□ 0.62
CLN6-211ENST00000635754 WNT10BO00744 389 aa18.93■□□□□ 0.62
CLN6-211ENST00000635754 PRDX5P30044 214 aa18.93■□□□□ 0.62
CLN6-211ENST00000635754 HDLBPQ00341 1268 aaKnown RBP18.93■□□□□ 0.62
CLN6-211ENST00000635754 NBPF9Q3BBW0 867 aa18.93■□□□□ 0.62
CLN6-211ENST00000635754 SPTY2D1Q68D10 685 aaPredicted RBP18.93■□□□□ 0.62
CLN6-211ENST00000635754 DCPSQ96C86 337 aaKnown RBP18.93■□□□□ 0.62
CLN6-211ENST00000635754 ABCF2Q9UG63 623 aa18.93■□□□□ 0.62
CLN6-211ENST00000635754 POLR2AP24928 1970 aaKnown RBP18.93■□□□□ 0.62
CLN6-211ENST00000635754 CRKP46108 304 aa18.92■□□□□ 0.62
CLN6-211ENST00000635754 TEKT1Q969V4 418 aa18.92■□□□□ 0.62
CLN6-211ENST00000635754 ZBED3Q96IU2 234 aaPredicted RBP18.92■□□□□ 0.62
CLN6-211ENST00000635754 SNRKQ9NRH2 765 aa18.92■□□□□ 0.62
CLN6-211ENST00000635754 ASTN2O75129 1339 aaPredicted RBP18.92■□□□□ 0.62
CLN6-211ENST00000635754 PITPNM2Q9BZ72 1349 aa18.92■□□□□ 0.62
CLN6-211ENST00000635754 SPDYE2BA6NHP3 402 aa18.91■□□□□ 0.62
CLN6-211ENST00000635754 MYO1BO43795 1136 aa18.91■□□□□ 0.62
CLN6-211ENST00000635754 SPDYE6P0CI01 402 aa18.91■□□□□ 0.62
CLN6-211ENST00000635754 ANGEL2Q5VTE6 544 aaKnown RBP18.91■□□□□ 0.62
CLN6-211ENST00000635754 MAST2Q6P0Q8 1798 aa18.91■□□□□ 0.62
CLN6-211ENST00000635754 ERICH6Q7L0X2 663 aa18.91■□□□□ 0.62
CLN6-211ENST00000635754 CDC37L1Q7L3B6 337 aa18.91■□□□□ 0.62
CLN6-211ENST00000635754 DZIP1Q86YF9 867 aaKnown RBP18.91■□□□□ 0.62
CLN6-211ENST00000635754 MRIQ9BWK5 157 aa18.91■□□□□ 0.62
CLN6-211ENST00000635754 PCDHAC2Q9Y5I4 1007 aa18.91■□□□□ 0.62
CLN6-211ENST00000635754 MYH2Q9UKX2 1941 aa18.9■□□□□ 0.62
CLN6-211ENST00000635754 ITGBL1O95965 494 aaPredicted RBP18.9■□□□□ 0.62
CLN6-211ENST00000635754 ZAP70P43403 619 aa18.9■□□□□ 0.62
CLN6-211ENST00000635754 ANKRD45Q5TZF3 282 aa18.9■□□□□ 0.62
CLN6-211ENST00000635754 HHIPL2Q6UWX4 724 aa18.9■□□□□ 0.62
CLN6-211ENST00000635754 TBC1D9Q6ZT07 1266 aa18.9■□□□□ 0.62
CLN6-211ENST00000635754 KRT26Q7Z3Y9 468 aa18.9■□□□□ 0.62
CLN6-211ENST00000635754 SULF1Q8IWU6 871 aa18.9■□□□□ 0.62
CLN6-211ENST00000635754 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.9■□□□□ 0.62
CLN6-211ENST00000635754 GPATCH3Q96I76 525 aa18.9■□□□□ 0.62
CLN6-211ENST00000635754 TRPM7Q96QT4 1865 aa18.89■□□□□ 0.61
CLN6-211ENST00000635754 PASKQ96RG2 1323 aa18.89■□□□□ 0.61
CLN6-211ENST00000635754 IGHDP01880 384 aa18.89■□□□□ 0.61
CLN6-211ENST00000635754 SLF2Q8IX21 1173 aa18.89■□□□□ 0.61
CLN6-211ENST00000635754 SMC5Q8IY18 1101 aa18.89■□□□□ 0.61
CLN6-211ENST00000635754 PRMT6Q96LA8 375 aaPredicted RBP18.89■□□□□ 0.61
CLN6-211ENST00000635754 GLIS2Q9BZE0 524 aaPredicted RBP18.89■□□□□ 0.61
CLN6-211ENST00000635754 LRP2BPQ9P2M1 347 aa18.89■□□□□ 0.61
CLN6-211ENST00000635754 MYO5AQ9Y4I1 1855 aaKnown RBP18.89■□□□□ 0.61
CLN6-211ENST00000635754 DOCK2Q92608 1830 aa18.88■□□□□ 0.61
CLN6-211ENST00000635754 CYP2E1P05181 493 aaPredicted RBP18.88■□□□□ 0.61
CLN6-211ENST00000635754 DIXDC1Q155Q3 683 aa18.88■□□□□ 0.61
CLN6-211ENST00000635754 APOBEC3FQ8IUX4 373 aaKnown RBP18.88■□□□□ 0.61
CLN6-211ENST00000635754 ZDHHC15Q96MV8 337 aa18.88■□□□□ 0.61
CLN6-211ENST00000635754 RNF39Q9H2S5 420 aa18.88■□□□□ 0.61
CLN6-211ENST00000635754 RAI14Q9P0K7 980 aa18.88■□□□□ 0.61
CLN6-211ENST00000635754 NEFLP07196 543 aa18.87■□□□□ 0.61
CLN6-211ENST00000635754 HSPA6P17066 643 aa18.87■□□□□ 0.61
CLN6-211ENST00000635754 ATP5JP18859 108 aa18.87■□□□□ 0.61
CLN6-211ENST00000635754 USP48Q86UV5 1035 aa18.87■□□□□ 0.61
CLN6-211ENST00000635754 ECHDC1Q9NTX5 307 aa18.87■□□□□ 0.61
CLN6-211ENST00000635754 CLRN2A0PK11 232 aa18.86■□□□□ 0.61
CLN6-211ENST00000635754 ADM5C9JUS6 153 aa18.86■□□□□ 0.61
CLN6-211ENST00000635754 TRAF5O00463 557 aa18.86■□□□□ 0.61
CLN6-211ENST00000635754 APLP1P51693 650 aa18.86■□□□□ 0.61
CLN6-211ENST00000635754 MECOMQ03112 1051 aa18.86■□□□□ 0.61
CLN6-211ENST00000635754 DNAJC2Q99543 621 aaKnown RBP18.86■□□□□ 0.61
CLN6-211ENST00000635754 TDRD3Q9H7E2 651 aaKnown RBP18.86■□□□□ 0.61
CLN6-211ENST00000635754 DAGLAQ9Y4D2 1042 aa18.86■□□□□ 0.61
CLN6-211ENST00000635754 IGSF3O75054 1194 aa18.85■□□□□ 0.61
CLN6-211ENST00000635754 GSTO1P78417 241 aa18.85■□□□□ 0.61
CLN6-211ENST00000635754 TTF1Q15361 905 aaPredicted RBP18.85■□□□□ 0.61
CLN6-211ENST00000635754 SPDYE2Q495Y8 402 aa18.85■□□□□ 0.61
CLN6-211ENST00000635754 B4GALNT3Q6L9W6 998 aa18.85■□□□□ 0.61
CLN6-211ENST00000635754 VEZTQ9HBM0 779 aa18.85■□□□□ 0.61
CLN6-211ENST00000635754 NDUFB9Q9Y6M9 179 aa18.85■□□□□ 0.61
CLN6-211ENST00000635754 MROH7-TTC4A0A0A0MT08 1334 aa18.85■□□□□ 0.61
CLN6-211ENST00000635754 AOX1Q06278 1338 aa18.85■□□□□ 0.61
CLN6-211ENST00000635754 APOBEC3HQ6NTF7 200 aaKnown RBP18.84■□□□□ 0.61
CLN6-211ENST00000635754 NSUN4Q96CB9 384 aaKnown RBP18.84■□□□□ 0.61
CLN6-211ENST00000635754 BOLA2Q9H3K6 86 aa18.84■□□□□ 0.61
CLN6-211ENST00000635754 PIH1D3Q9NQM4 214 aaKnown RBP18.84■□□□□ 0.61
CLN6-211ENST00000635754 TMOD2Q9NZR1 351 aa18.84■□□□□ 0.61
CLN6-211ENST00000635754 ZNF70Q9UC06 446 aaPredicted RBP18.84■□□□□ 0.61
CLN6-211ENST00000635754 GAKO14976 1311 aa18.84■□□□□ 0.61
CLN6-211ENST00000635754 TTC41PQ6P2S7 1318 aa18.84■□□□□ 0.61
CLN6-211ENST00000635754 IDH1O75874 414 aaKnown RBP18.83■□□□□ 0.61
CLN6-211ENST00000635754 LDHCP07864 332 aa18.83■□□□□ 0.61
CLN6-211ENST00000635754 TNFAIP1Q13829 316 aa18.83■□□□□ 0.61
CLN6-211ENST00000635754 HAUS7Q99871 368 aa18.83■□□□□ 0.61
CLN6-211ENST00000635754 SCAF8Q9UPN6 1271 aaKnown RBP18.83■□□□□ 0.61
CLN6-211ENST00000635754 GOLIM4O00461 696 aa18.83■□□□□ 0.6
CLN6-211ENST00000635754 MX1P20591 662 aa18.83■□□□□ 0.6
CLN6-211ENST00000635754 FMR1Q06787 632 aaKnown RBP eCLIP18.83■□□□□ 0.6
CLN6-211ENST00000635754 MAP3K12Q12852 859 aa18.83■□□□□ 0.6
CLN6-211ENST00000635754 NAA16Q6N069 864 aaPredicted RBP18.83■□□□□ 0.6
CLN6-211ENST00000635754 FAM163AQ96GL9 167 aaPredicted RBP18.83■□□□□ 0.6
CLN6-211ENST00000635754 LNPKQ9C0E8 428 aa18.83■□□□□ 0.6
CLN6-211ENST00000635754 ANTXR1Q9H6X2 564 aa18.83■□□□□ 0.6
CLN6-211ENST00000635754 PAG1Q9NWQ8 432 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms