RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 TRPC3Q13507 836 aa19.56■□□□□ 0.72
CACNA1A-215ENST00000635727 TAB3Q8N5C8 712 aaPredicted RBP19.56■□□□□ 0.72
CACNA1A-215ENST00000635727 ZBTB24O43167 697 aaPredicted RBP19.56■□□□□ 0.72
CACNA1A-215ENST00000635727 MED10Q9BTT4 135 aa19.56■□□□□ 0.72
CACNA1A-215ENST00000635727 NSFL1CQ9UNZ2 370 aaKnown RBP19.56■□□□□ 0.72
CACNA1A-215ENST00000635727 CLUL1Q15846 466 aa19.56■□□□□ 0.72
CACNA1A-215ENST00000635727 EHBP1Q8NDI1 1231 aa19.56■□□□□ 0.72
CACNA1A-215ENST00000635727 ERBINQ96RT1 1412 aa19.55■□□□□ 0.72
CACNA1A-215ENST00000635727 SPDYE2BA6NHP3 402 aa19.55■□□□□ 0.72
CACNA1A-215ENST00000635727 OPA1O60313 960 aa19.55■□□□□ 0.72
CACNA1A-215ENST00000635727 SPDYE6P0CI01 402 aa19.55■□□□□ 0.72
CACNA1A-215ENST00000635727 SLC39A6Q13433 755 aa19.55■□□□□ 0.72
CACNA1A-215ENST00000635727 PARD3BQ8TEW8 1205 aa19.55■□□□□ 0.72
CACNA1A-215ENST00000635727 BRF1Q92994 677 aa19.55■□□□□ 0.72
CACNA1A-215ENST00000635727 MSANTD4Q8NCY6 345 aa19.55■□□□□ 0.72
CACNA1A-215ENST00000635727 PARP3Q9Y6F1 533 aa19.55■□□□□ 0.72
CACNA1A-215ENST00000635727 STK25O00506 426 aa19.55■□□□□ 0.72
CACNA1A-215ENST00000635727 CXorf38Q8TB03 319 aa19.55■□□□□ 0.72
CACNA1A-215ENST00000635727 JDP2Q8WYK2 163 aa19.55■□□□□ 0.72
CACNA1A-215ENST00000635727 ATP11AP98196 1134 aa19.55■□□□□ 0.72
CACNA1A-215ENST00000635727 CCNT1O60563 726 aaKnown RBP19.55■□□□□ 0.72
CACNA1A-215ENST00000635727 PTPROQ16827 1216 aa19.55■□□□□ 0.72
CACNA1A-215ENST00000635727 RPAP2Q8IXW5 612 aaPredicted RBP19.54■□□□□ 0.72
CACNA1A-215ENST00000635727 PICK1Q9NRD5 415 aa19.54■□□□□ 0.72
CACNA1A-215ENST00000635727 SLC4A1P02730 911 aa19.54■□□□□ 0.72
CACNA1A-215ENST00000635727 ALDH3A1P30838 453 aa19.54■□□□□ 0.72
CACNA1A-215ENST00000635727 SLC8A3P57103 927 aa19.54■□□□□ 0.72
CACNA1A-215ENST00000635727 DDX19AQ9NUU7 478 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-215ENST00000635727 UTP14CQ5TAP6 766 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-215ENST00000635727 MORC4Q8TE76 937 aa19.54■□□□□ 0.72
CACNA1A-215ENST00000635727 SMIM24O75264 130 aa19.54■□□□□ 0.72
CACNA1A-215ENST00000635727 KRT2P35908 639 aa19.54■□□□□ 0.72
CACNA1A-215ENST00000635727 PSMA7O14818 248 aa19.54■□□□□ 0.72
CACNA1A-215ENST00000635727 SKILP12757 684 aa19.54■□□□□ 0.72
CACNA1A-215ENST00000635727 TTC31Q49AM3 519 aaPredicted RBP19.54■□□□□ 0.72
CACNA1A-215ENST00000635727 ZNF710Q8N1W2 664 aa19.54■□□□□ 0.72
CACNA1A-215ENST00000635727 KCNH5Q8NCM2 988 aa19.54■□□□□ 0.72
CACNA1A-215ENST00000635727 OLA1Q9NTK5 396 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-215ENST00000635727 ZSCAN23Q3MJ62 389 aa19.54■□□□□ 0.72
CACNA1A-215ENST00000635727 CCDC42Q96M95 316 aa19.54■□□□□ 0.72
CACNA1A-215ENST00000635727 TTC14Q96N46 770 aa19.54■□□□□ 0.72
CACNA1A-215ENST00000635727 SYNJ2BP-COX16A0A087WUM0 186 aa19.53■□□□□ 0.72
CACNA1A-215ENST00000635727 ZNF804AQ7Z570 1209 aa19.53■□□□□ 0.72
CACNA1A-215ENST00000635727 CCDC24Q8N4L8 307 aa19.53■□□□□ 0.72
CACNA1A-215ENST00000635727 COX16Q9P0S2 106 aa19.53■□□□□ 0.72
CACNA1A-215ENST00000635727 POMGNT1Q8WZA1 660 aa19.53■□□□□ 0.72
CACNA1A-215ENST00000635727 RILPQ96NA2 401 aa19.53■□□□□ 0.72
CACNA1A-215ENST00000635727 POLD1P28340 1107 aa19.53■□□□□ 0.72
CACNA1A-215ENST00000635727 PRPHP41219 470 aa19.53■□□□□ 0.72
CACNA1A-215ENST00000635727 MYO1AQ9UBC5 1043 aa19.53■□□□□ 0.72
CACNA1A-215ENST00000635727 ZNF174Q15697 407 aa19.53■□□□□ 0.72
CACNA1A-215ENST00000635727 STK38LQ9Y2H1 464 aa19.52■□□□□ 0.72
CACNA1A-215ENST00000635727 PI4KAP2A4QPH2 592 aa19.52■□□□□ 0.72
CACNA1A-215ENST00000635727 HP1BP3Q5SSJ5 553 aaPredicted RBP19.52■□□□□ 0.72
CACNA1A-215ENST00000635727 SESTD1Q86VW0 696 aa19.52■□□□□ 0.72
CACNA1A-215ENST00000635727 METTL13Q8N6R0 699 aa19.52■□□□□ 0.72
CACNA1A-215ENST00000635727 PI4KAP1Q8N8J0 262 aa19.52■□□□□ 0.72
CACNA1A-215ENST00000635727 RMDN2Q96LZ7 410 aa19.52■□□□□ 0.72
CACNA1A-215ENST00000635727 MX2P20592 715 aa19.52■□□□□ 0.72
CACNA1A-215ENST00000635727 LMBR1Q8WVP7 490 aa19.52■□□□□ 0.72
CACNA1A-215ENST00000635727 SSH1Q8WYL5 1049 aa19.52■□□□□ 0.72
CACNA1A-215ENST00000635727 KIF9Q9HAQ2 790 aa19.52■□□□□ 0.72
CACNA1A-215ENST00000635727 TCP10Q12799 353 aa19.52■□□□□ 0.72
CACNA1A-215ENST00000635727 CAPN12Q6ZSI9 719 aa19.52■□□□□ 0.72
CACNA1A-215ENST00000635727 LETM2Q2VYF4 491 aa19.52■□□□□ 0.71
CACNA1A-215ENST00000635727 SLC12A1Q13621 1099 aa19.51■□□□□ 0.71
CACNA1A-215ENST00000635727 KRT28Q7Z3Y7 464 aa19.51■□□□□ 0.71
CACNA1A-215ENST00000635727 SLC9C2Q5TAH2 1124 aa19.51■□□□□ 0.71
CACNA1A-215ENST00000635727 KRT23Q9C075 422 aa19.51■□□□□ 0.71
CACNA1A-215ENST00000635727 HS2ST1Q7LGA3 356 aa19.51■□□□□ 0.71
CACNA1A-215ENST00000635727 TMOD4Q9NZQ9 345 aa19.51■□□□□ 0.71
CACNA1A-215ENST00000635727 EMILIN1Q9Y6C2 1016 aa19.51■□□□□ 0.71
CACNA1A-215ENST00000635727 VWA3AA6NCI4 1184 aa19.51■□□□□ 0.71
CACNA1A-215ENST00000635727 INPP1P49441 399 aa19.51■□□□□ 0.71
CACNA1A-215ENST00000635727 ESR2Q92731 530 aa19.51■□□□□ 0.71
CACNA1A-215ENST00000635727 CTAGE1Q96RT6 745 aa19.51■□□□□ 0.71
CACNA1A-215ENST00000635727 RIOK1Q9BRS2 568 aaKnown RBP19.51■□□□□ 0.71
CACNA1A-215ENST00000635727 CCDC171Q6TFL3 1326 aa19.51■□□□□ 0.71
CACNA1A-215ENST00000635727 ZC3H12CQ9C0D7 883 aaKnown RBP19.51■□□□□ 0.71
CACNA1A-215ENST00000635727 BEND3Q5T5X7 828 aa19.5■□□□□ 0.71
CACNA1A-215ENST00000635727 KRT79Q5XKE5 535 aa19.5■□□□□ 0.71
CACNA1A-215ENST00000635727 TBC1D9Q6ZT07 1266 aa19.5■□□□□ 0.71
CACNA1A-215ENST00000635727 BUB1BO60566 1050 aaPredicted RBP19.5■□□□□ 0.71
CACNA1A-215ENST00000635727 FNDC3AQ9Y2H6 1198 aaKnown RBP19.5■□□□□ 0.71
CACNA1A-215ENST00000635727 LRMPQ12912 555 aa19.5■□□□□ 0.71
CACNA1A-215ENST00000635727 CPXCR1Q8N123 301 aa19.5■□□□□ 0.71
CACNA1A-215ENST00000635727 MTRF1LQ9UGC7 380 aaKnown RBP19.5■□□□□ 0.71
CACNA1A-215ENST00000635727 TBC1D8O95759 1140 aa19.5■□□□□ 0.71
CACNA1A-215ENST00000635727 LACTBP83111 547 aaPredicted RBP19.5■□□□□ 0.71
CACNA1A-215ENST00000635727 STRN3Q13033 797 aa19.5■□□□□ 0.71
CACNA1A-215ENST00000635727 PAGR1Q9BTK6 254 aa19.5■□□□□ 0.71
CACNA1A-215ENST00000635727 APOBRQ0VD83 1088 aa19.5■□□□□ 0.71
CACNA1A-215ENST00000635727 RPS6KA2Q15349 733 aa19.5■□□□□ 0.71
CACNA1A-215ENST00000635727 NSMCE1Q8WV22 266 aa19.5■□□□□ 0.71
CACNA1A-215ENST00000635727 SEPT8Q92599 483 aa19.5■□□□□ 0.71
CACNA1A-215ENST00000635727 NKIRAS1Q9NYS0 192 aa19.5■□□□□ 0.71
CACNA1A-215ENST00000635727 CALCOCO2Q13137 446 aa19.49■□□□□ 0.71
CACNA1A-215ENST00000635727 OATP04181 439 aa19.49■□□□□ 0.71
CACNA1A-215ENST00000635727 USP48Q86UV5 1035 aa19.49■□□□□ 0.71
CACNA1A-215ENST00000635727 DTNBO60941 627 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms