RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 PROSER2Q86WR7 435 aaPredicted RBP2.54□□□□□ -2
SMARCB1-209ENST00000635578 WFDC3Q8IUB2 231 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 STK11IPQ8N1F8 1099 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 PLD6Q8N2A8 252 aaKnown RBP2.54□□□□□ -2
SMARCB1-209ENST00000635578 LRRN4CLQ8ND94 238 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 GLIS3Q8NEA6 775 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 BSNDQ8WZ55 320 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 EZH1Q92800 747 aaPredicted RBP2.54□□□□□ -2
SMARCB1-209ENST00000635578 OSMRQ99650 979 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 ZKSCAN3Q9BRR0 538 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 SEMA6CQ9H3T2 930 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 MBNL3Q9NUK0 354 aaKnown RBP2.54□□□□□ -2
SMARCB1-209ENST00000635578 STIM2Q9P246 746 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 SALL4Q9UJQ4 1053 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 AP4E1Q9UPM8 1137 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 DAGLAQ9Y4D2 1042 aa2.54□□□□□ -2
SMARCB1-209ENST00000635578 RNASE1P07998 156 aaKnown RBP2.53□□□□□ -2
SMARCB1-209ENST00000635578 CD8BP10966 210 aa2.53□□□□□ -2
SMARCB1-209ENST00000635578 FUT4P22083 530 aa2.53□□□□□ -2
SMARCB1-209ENST00000635578 MAOBP27338 520 aa2.53□□□□□ -2
SMARCB1-209ENST00000635578 BUD31P41223 144 aaPredicted RBP2.53□□□□□ -2
SMARCB1-209ENST00000635578 RAP1GAPP47736 663 aa2.53□□□□□ -2
SMARCB1-209ENST00000635578 MLANAQ16655 118 aa2.53□□□□□ -2
SMARCB1-209ENST00000635578 C8orf34Q49A92 452 aa2.53□□□□□ -2
SMARCB1-209ENST00000635578 LRRC56Q8IYG6 542 aaPredicted RBP2.53□□□□□ -2
SMARCB1-209ENST00000635578 TMEM102Q8N9M5 508 aaPredicted RBP2.53□□□□□ -2
SMARCB1-209ENST00000635578 TTC16Q8NEE8 873 aa2.53□□□□□ -2
SMARCB1-209ENST00000635578 PI4K2BQ8TCG2 481 aa2.53□□□□□ -2
SMARCB1-209ENST00000635578 TMEM40Q8WWA1 233 aa2.53□□□□□ -2
SMARCB1-209ENST00000635578 EDEM1Q92611 657 aa2.53□□□□□ -2
SMARCB1-209ENST00000635578 NXPE3Q969Y0 559 aa2.53□□□□□ -2
SMARCB1-209ENST00000635578 FAM105AQ9NUU6 356 aa2.53□□□□□ -2
SMARCB1-209ENST00000635578 NCANO14594 1321 aa2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 ACIN1Q9UKV3 1341 aaKnown RBP2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 METTL12A8MUP2 240 aa2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 B8ZZF3 427 aa2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 PRRG2O14669 202 aa2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 EREGO14944 169 aa2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 CTSBP07858 339 aa2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 ESRRAP11474 423 aaPredicted RBP2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 CFPP27918 469 aa2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 ASPAP45381 313 aa2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 DNM1Q05193 864 aaKnown RBP2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 MESP2Q0VG99 397 aa2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 CDK5R2Q13319 367 aa2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 SWI5Q1ZZU3 235 aa2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 LCNL1Q6ZST4 164 aa2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 ABTB2Q8N961 1025 aa2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 STK32AQ8WU08 396 aa2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 FAM84AQ96KN4 292 aa2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 TOX2Q96NM4 488 aa2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 CHRDQ9H2X0 955 aa2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 LATS2Q9NRM7 1088 aa2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 C1GALT1Q9NS00 363 aa2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 RAD18Q9NS91 495 aa2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 CXXC1Q9P0U4 656 aaPredicted RBP2.52□□□□□ -2.01
SMARCB1-209ENST00000635578 FAM87AP0C7U9 286 aa2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 ZSCAN22P10073 491 aaPredicted RBP2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 PCSK2P16519 638 aa2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 KCNMB1Q16558 191 aa2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 CYP27C1Q4G0S4 372 aa2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 CFAP70Q5T0N1 1121 aa2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 OGFOD3Q6PK18 319 aa2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 ARHGAP27Q6ZUM4 889 aa2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 ZSWIM9Q86XI8 627 aa2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 FNBP4Q8N3X1 1017 aaPredicted RBP2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 ZSCAN18Q8TBC5 510 aaPredicted RBP2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 NETO1Q8TDF5 533 aa2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 MISP3Q96FF7 219 aa2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 LIN37Q96GY3 246 aaPredicted RBP2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 GGNBP2Q9H3C7 697 aa2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 SOX17Q9H6I2 414 aaPredicted RBP2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 ACSS3Q9H6R3 686 aa2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 PRDM7Q9NQW5 492 aa2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 LMCD1Q9NZU5 365 aa2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 SEPT3Q9UH03 358 aa2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 ZMIZ1Q9ULJ6 1067 aa2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 U3KQE9 123 aa2.51□□□□□ -2.01
SMARCB1-209ENST00000635578 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.5□□□□□ -2.01
SMARCB1-209ENST00000635578 PHACTR2O75167 634 aa2.5□□□□□ -2.01
SMARCB1-209ENST00000635578 ECEL1O95672 775 aa2.5□□□□□ -2.01
SMARCB1-209ENST00000635578 PDGFAP04085 211 aa2.5□□□□□ -2.01
SMARCB1-209ENST00000635578 RPLP1P05386 114 aaKnown RBP2.5□□□□□ -2.01
SMARCB1-209ENST00000635578 EDN3P14138 238 aa2.5□□□□□ -2.01
SMARCB1-209ENST00000635578 ITIH2P19823 946 aa2.5□□□□□ -2.01
SMARCB1-209ENST00000635578 PCDH1Q08174 1060 aa2.5□□□□□ -2.01
SMARCB1-209ENST00000635578 FAM69CQ0P6D2 419 aa2.5□□□□□ -2.01
SMARCB1-209ENST00000635578 POU4F3Q15319 338 aa2.5□□□□□ -2.01
SMARCB1-209ENST00000635578 ECM1Q16610 540 aa2.5□□□□□ -2.01
SMARCB1-209ENST00000635578 AOC3Q16853 763 aa2.5□□□□□ -2.01
SMARCB1-209ENST00000635578 KRTAP19-4Q3LI73 84 aa2.5□□□□□ -2.01
SMARCB1-209ENST00000635578 C1QL4Q86Z23 238 aa2.5□□□□□ -2.01
SMARCB1-209ENST00000635578 CILP2Q8IUL8 1156 aa2.5□□□□□ -2.01
SMARCB1-209ENST00000635578 KRTAP17-1Q9BYP8 105 aa2.5□□□□□ -2.01
SMARCB1-209ENST00000635578 NRSN2Q9GZP1 204 aa2.5□□□□□ -2.01
SMARCB1-209ENST00000635578 ZNF503-AS2A6NEH8 195 aa2.49□□□□□ -2.01
SMARCB1-209ENST00000635578 CYP11A1P05108 521 aa2.49□□□□□ -2.01
SMARCB1-209ENST00000635578 POLR3DP05423 398 aaPredicted RBP2.49□□□□□ -2.01
SMARCB1-209ENST00000635578 PDE3AQ14432 1141 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms