RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 FKBP1AP62942 108 aaKnown RBP17.45■□□□□ 0.38
LINC00339-208ENST00000634934 DZIP1Q86YF9 867 aaKnown RBP17.45■□□□□ 0.38
LINC00339-208ENST00000634934 ZBTB12Q9Y330 459 aaPredicted RBP17.45■□□□□ 0.38
LINC00339-208ENST00000634934 POTECB2RU33 542 aa17.44■□□□□ 0.38
LINC00339-208ENST00000634934 LRRFIP1Q32MZ4 808 aaKnown RBP17.44■□□□□ 0.38
LINC00339-208ENST00000634934 SLC9C2Q5TAH2 1124 aa17.44■□□□□ 0.38
LINC00339-208ENST00000634934 KIAA0825Q8IV33 1275 aa17.44■□□□□ 0.38
LINC00339-208ENST00000634934 MYO3BQ8WXR4 1341 aa17.43■□□□□ 0.38
LINC00339-208ENST00000634934 MECOMQ03112 1051 aa17.43■□□□□ 0.38
LINC00339-208ENST00000634934 ZSCAN25Q6NSZ9 544 aa17.43■□□□□ 0.38
LINC00339-208ENST00000634934 MAGEB6Q8N7X4 407 aa17.43■□□□□ 0.38
LINC00339-208ENST00000634934 TTF2Q9UNY4 1162 aaKnown RBP17.43■□□□□ 0.38
LINC00339-208ENST00000634934 SUGT1Q9Y2Z0 365 aa17.43■□□□□ 0.38
LINC00339-208ENST00000634934 ZNF646O15015 1829 aaPredicted RBP17.43■□□□□ 0.38
LINC00339-208ENST00000634934 PSME4Q14997 1843 aa17.42■□□□□ 0.38
LINC00339-208ENST00000634934 KIF3CO14782 793 aa17.42■□□□□ 0.38
LINC00339-208ENST00000634934 RNF113AO15541 343 aaKnown RBP17.42■□□□□ 0.38
LINC00339-208ENST00000634934 CHGBP05060 677 aa17.42■□□□□ 0.38
LINC00339-208ENST00000634934 PDE6AP16499 860 aa17.42■□□□□ 0.38
LINC00339-208ENST00000634934 GPC2Q8N158 579 aa17.42■□□□□ 0.38
LINC00339-208ENST00000634934 DIAPH3Q9NSV4 1193 aa17.42■□□□□ 0.38
LINC00339-208ENST00000634934 GMPSP49915 693 aaPredicted RBP17.42■□□□□ 0.38
LINC00339-208ENST00000634934 SCNN1DP51172 638 aa17.42■□□□□ 0.38
LINC00339-208ENST00000634934 SLFNL1Q499Z3 407 aa17.42■□□□□ 0.38
LINC00339-208ENST00000634934 NAA16Q6N069 864 aaPredicted RBP17.42■□□□□ 0.38
LINC00339-208ENST00000634934 AGBL3Q8NEM8 1001 aa17.42■□□□□ 0.38
LINC00339-208ENST00000634934 NSUN4Q96CB9 384 aaKnown RBP17.42■□□□□ 0.38
LINC00339-208ENST00000634934 ZNF532Q9HCE3 1301 aa17.41■□□□□ 0.38
LINC00339-208ENST00000634934 HIP1O00291 1037 aa17.41■□□□□ 0.38
LINC00339-208ENST00000634934 CDC45O75419 566 aa17.41■□□□□ 0.38
LINC00339-208ENST00000634934 ZFYP08048 801 aaPredicted RBP17.41■□□□□ 0.38
LINC00339-208ENST00000634934 CYP7A1P22680 504 aa17.41■□□□□ 0.38
LINC00339-208ENST00000634934 ADD2P35612 726 aa17.41■□□□□ 0.38
LINC00339-208ENST00000634934 GSTO1P78417 241 aa17.41■□□□□ 0.38
LINC00339-208ENST00000634934 DIXDC1Q155Q3 683 aa17.41■□□□□ 0.38
LINC00339-208ENST00000634934 GMLQ99445 158 aa17.41■□□□□ 0.38
LINC00339-208ENST00000634934 MAST3O60307 1309 aa17.4■□□□□ 0.38
LINC00339-208ENST00000634934 SCN4AP35499 1836 aa17.4■□□□□ 0.38
LINC00339-208ENST00000634934 RPS12P25398 132 aaKnown RBP17.4■□□□□ 0.38
LINC00339-208ENST00000634934 CHMLP26374 656 aa17.4■□□□□ 0.38
LINC00339-208ENST00000634934 CASC1Q6TDU7 716 aa17.4■□□□□ 0.38
LINC00339-208ENST00000634934 OGFOD1Q8N543 542 aa17.4■□□□□ 0.38
LINC00339-208ENST00000634934 ZNF384Q8TF68 577 aa17.4■□□□□ 0.38
LINC00339-208ENST00000634934 L3MBTL3Q96JM7 780 aaPredicted RBP17.4■□□□□ 0.38
LINC00339-208ENST00000634934 RFX7Q2KHR2 1363 aa17.4■□□□□ 0.38
LINC00339-208ENST00000634934 IGSF3O75054 1194 aa17.39■□□□□ 0.37
LINC00339-208ENST00000634934 USP17L8P0C7I0 530 aa17.39■□□□□ 0.37
LINC00339-208ENST00000634934 NMIQ13287 307 aaPredicted RBP17.39■□□□□ 0.37
LINC00339-208ENST00000634934 UBE3CQ15386 1083 aa17.39■□□□□ 0.37
LINC00339-208ENST00000634934 CWC27Q6UX04 472 aaKnown RBP17.39■□□□□ 0.37
LINC00339-208ENST00000634934 SLF2Q8IX21 1173 aa17.39■□□□□ 0.37
LINC00339-208ENST00000634934 HDAC9Q9UKV0 1011 aa17.39■□□□□ 0.37
LINC00339-208ENST00000634934 TCRBV5S4A2TA0A5A2 114 aa17.38■□□□□ 0.37
LINC00339-208ENST00000634934 SHTN1A0MZ66 631 aa17.38■□□□□ 0.37
LINC00339-208ENST00000634934 LDHCP07864 332 aa17.38■□□□□ 0.37
LINC00339-208ENST00000634934 VEGFAP15692 232 aaPredicted RBP17.38■□□□□ 0.37
LINC00339-208ENST00000634934 RBM5P52756 815 aaKnown RBP eCLIP17.38■□□□□ 0.37
LINC00339-208ENST00000634934 TICAM2Q86XR7 235 aa17.38■□□□□ 0.37
LINC00339-208ENST00000634934 FAM227BQ96M60 508 aa17.38■□□□□ 0.37
LINC00339-208ENST00000634934 MYO5AQ9Y4I1 1855 aaKnown RBP17.38■□□□□ 0.37
LINC00339-208ENST00000634934 AK9Q5TCS8 1911 aa17.38■□□□□ 0.37
LINC00339-208ENST00000634934 C8orf34Q49A92 452 aa17.37■□□□□ 0.37
LINC00339-208ENST00000634934 ZMYM1Q5SVZ6 1142 aa17.37■□□□□ 0.37
LINC00339-208ENST00000634934 ADGRA1Q86SQ6 560 aa17.37■□□□□ 0.37
LINC00339-208ENST00000634934 MIGA1Q8NAN2 632 aa17.37■□□□□ 0.37
LINC00339-208ENST00000634934 APPBP2Q92624 585 aa17.37■□□□□ 0.37
LINC00339-208ENST00000634934 DPF2Q92785 391 aa17.37■□□□□ 0.37
LINC00339-208ENST00000634934 TEKT1Q969V4 418 aa17.37■□□□□ 0.37
LINC00339-208ENST00000634934 DOCK2Q92608 1830 aa17.37■□□□□ 0.37
LINC00339-208ENST00000634934 A0A0D9SFI3 127 aa17.37■□□□□ 0.37
LINC00339-208ENST00000634934 DEKP35659 375 aaKnown RBP17.37■□□□□ 0.37
LINC00339-208ENST00000634934 EPS15P42566 896 aa17.37■□□□□ 0.37
LINC00339-208ENST00000634934 CRKP46108 304 aa17.37■□□□□ 0.37
LINC00339-208ENST00000634934 TMED8Q6PL24 325 aaPredicted RBP17.37■□□□□ 0.37
LINC00339-208ENST00000634934 MICALL2Q8IY33 904 aa17.37■□□□□ 0.37
LINC00339-208ENST00000634934 OSBP2Q969R2 916 aa17.37■□□□□ 0.37
LINC00339-208ENST00000634934 SEC62Q99442 399 aaKnown RBP17.37■□□□□ 0.37
LINC00339-208ENST00000634934 NOL10Q9BSC4 688 aaKnown RBP17.37■□□□□ 0.37
LINC00339-208ENST00000634934 CNOT7Q9UIV1 285 aaKnown RBP17.37■□□□□ 0.37
LINC00339-208ENST00000634934 SERPINA10Q9UK55 444 aa17.37■□□□□ 0.37
LINC00339-208ENST00000634934 MROH7-TTC4A0A0A0MT08 1334 aa17.36■□□□□ 0.37
LINC00339-208ENST00000634934 POTEIP0CG38 1075 aa17.36■□□□□ 0.37
LINC00339-208ENST00000634934 POTEJP0CG39 1038 aa17.36■□□□□ 0.37
LINC00339-208ENST00000634934 HDLBPQ00341 1268 aaKnown RBP17.36■□□□□ 0.37
LINC00339-208ENST00000634934 CFAP100Q494V2 611 aa17.36■□□□□ 0.37
LINC00339-208ENST00000634934 HHIPL2Q6UWX4 724 aa17.36■□□□□ 0.37
LINC00339-208ENST00000634934 RUFY2Q8WXA3 655 aa17.36■□□□□ 0.37
LINC00339-208ENST00000634934 PUS7LQ9H0K6 701 aaKnown RBP17.36■□□□□ 0.37
LINC00339-208ENST00000634934 HELLSQ9NRZ9 838 aa17.36■□□□□ 0.37
LINC00339-208ENST00000634934 HACL1Q9UJ83 578 aa17.36■□□□□ 0.37
LINC00339-208ENST00000634934 DAGLAQ9Y4D2 1042 aa17.36■□□□□ 0.37
LINC00339-208ENST00000634934 MAGEB6P1A0A0J9YX57 407 aa17.35■□□□□ 0.37
LINC00339-208ENST00000634934 H7C1D1 291 aa17.35■□□□□ 0.37
LINC00339-208ENST00000634934 M0R2C6 588 aa17.35■□□□□ 0.37
LINC00339-208ENST00000634934 LMOD1P29536 600 aaPredicted RBP17.35■□□□□ 0.37
LINC00339-208ENST00000634934 BTDP43251 543 aa17.35■□□□□ 0.37
LINC00339-208ENST00000634934 MCMDC2Q4G0Z9 681 aa17.35■□□□□ 0.37
LINC00339-208ENST00000634934 RBM26Q5T8P6 1007 aaKnown RBP17.35■□□□□ 0.37
LINC00339-208ENST00000634934 AIDAQ96BJ3 306 aa17.35■□□□□ 0.37
LINC00339-208ENST00000634934 FAM163AQ96GL9 167 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms